RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 HOXD4P09016 255 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-201ENST00000331920 HSPE1P61604 102 aaKnown RBP13.99□□□□□ -0.17
PTCH1-201ENST00000331920 DTX2Q86UW9 622 aa13.99□□□□□ -0.17
PTCH1-201ENST00000331920 FBXL7Q9UJT9 491 aa13.99□□□□□ -0.17
PTCH1-201ENST00000331920 MRPL32Q9BYC8 188 aaKnown RBP13.99□□□□□ -0.17
PTCH1-201ENST00000331920 FUT5Q11128 374 aa13.99□□□□□ -0.17
PTCH1-201ENST00000331920 TNFRSF14Q92956 283 aa13.99□□□□□ -0.17
PTCH1-201ENST00000331920 TMEM30AQ9NV96 361 aa13.99□□□□□ -0.17
PTCH1-201ENST00000331920 CRYBG1Q9Y4K1 1723 aa13.99□□□□□ -0.17
PTCH1-201ENST00000331920 RPL39P5Q59GN2 51 aa13.99□□□□□ -0.17
PTCH1-201ENST00000331920 FXYD1O00168 92 aa13.99□□□□□ -0.17
PTCH1-201ENST00000331920 EDIL3O43854 480 aa13.99□□□□□ -0.17
PTCH1-201ENST00000331920 ZNF146Q15072 292 aa13.99□□□□□ -0.17
PTCH1-201ENST00000331920 ATXN8Q156A1 80 aa13.98□□□□□ -0.17
PTCH1-201ENST00000331920 VDAC2P45880 294 aaPredicted RBP13.98□□□□□ -0.17
PTCH1-201ENST00000331920 CD300LDQ6UXZ3 194 aa13.98□□□□□ -0.17
PTCH1-201ENST00000331920 ZPLD1Q8TCW7 415 aa13.98□□□□□ -0.17
PTCH1-201ENST00000331920 C9orf40Q8IXQ3 194 aa13.98□□□□□ -0.17
PTCH1-201ENST00000331920 NPCDR1Q9BY65 106 aa13.98□□□□□ -0.17
PTCH1-201ENST00000331920 TJP1Q07157 1748 aa13.98□□□□□ -0.17
PTCH1-201ENST00000331920 ITGB1BP1O14713 200 aa13.98□□□□□ -0.17
PTCH1-201ENST00000331920 ORMDL3Q8N138 153 aa13.98□□□□□ -0.17
PTCH1-201ENST00000331920 TCRBV5S1A1TA0A578 114 aa13.98□□□□□ -0.17
PTCH1-201ENST00000331920 DRD3P35462 400 aa13.98□□□□□ -0.17
PTCH1-201ENST00000331920 NRN1LQ496H8 165 aa13.98□□□□□ -0.17
PTCH1-201ENST00000331920 TMEM167AQ8TBQ9 72 aa13.98□□□□□ -0.17
PTCH1-201ENST00000331920 PPIFP30405 207 aaKnown RBP13.98□□□□□ -0.17
PTCH1-201ENST00000331920 RFLNBQ8N5W9 214 aa13.98□□□□□ -0.17
PTCH1-201ENST00000331920 PEMTQ9UBM1 199 aa13.98□□□□□ -0.17
PTCH1-201ENST00000331920 A0A1W2PQD3 144 aa13.97□□□□□ -0.17
PTCH1-201ENST00000331920 FAM214BQ7L5A3 538 aa13.97□□□□□ -0.17
PTCH1-201ENST00000331920 CHTOPQ9Y3Y2 248 aaKnown RBP13.97□□□□□ -0.17
PTCH1-201ENST00000331920 HIGD1CA8MV81 97 aa13.97□□□□□ -0.17
PTCH1-201ENST00000331920 FBXL15Q9H469 300 aa13.97□□□□□ -0.17
PTCH1-201ENST00000331920 FOXH1O75593 365 aa13.97□□□□□ -0.17
PTCH1-201ENST00000331920 NBEAP1P0C6P0 100 aa13.97□□□□□ -0.17
PTCH1-201ENST00000331920 FGF11Q92914 225 aa13.97□□□□□ -0.17
PTCH1-201ENST00000331920 LOXL4Q96JB6 756 aa13.97□□□□□ -0.17
PTCH1-201ENST00000331920 KDM3BQ7LBC6 1761 aa13.97□□□□□ -0.17
PTCH1-201ENST00000331920 DMRT1Q9Y5R6 373 aa13.97□□□□□ -0.17
PTCH1-201ENST00000331920 GFRA3O60609 400 aa13.97□□□□□ -0.17
PTCH1-201ENST00000331920 GLRXP35754 106 aa13.97□□□□□ -0.17
PTCH1-201ENST00000331920 ESDP10768 282 aa13.96□□□□□ -0.17
PTCH1-201ENST00000331920 FMC1Q96HJ9 113 aa13.96□□□□□ -0.17
PTCH1-201ENST00000331920 ZAR1Q86SH2 424 aa13.96□□□□□ -0.17
PTCH1-201ENST00000331920 ZNRF1Q8ND25 227 aa13.96□□□□□ -0.17
PTCH1-201ENST00000331920 FDCSPQ8NFU4 85 aa13.96□□□□□ -0.17
PTCH1-201ENST00000331920 GTF3AQ92664 365 aaKnown RBP13.96□□□□□ -0.17
PTCH1-201ENST00000331920 RPRMQ9NS64 109 aa13.96□□□□□ -0.17
PTCH1-201ENST00000331920 TUBGCP6Q96RT7 1819 aa13.96□□□□□ -0.17
PTCH1-201ENST00000331920 A8MWV9 139 aa13.96□□□□□ -0.17
PTCH1-201ENST00000331920 ZP4Q12836 540 aa13.96□□□□□ -0.17
PTCH1-201ENST00000331920 EPDR1Q9UM22 224 aa13.96□□□□□ -0.17
PTCH1-201ENST00000331920 IGLV3-25P01717 112 aa13.96□□□□□ -0.18
PTCH1-201ENST00000331920 DLL3Q9NYJ7 618 aa13.96□□□□□ -0.18
PTCH1-201ENST00000331920 VN1R4Q7Z5H5 301 aa13.95□□□□□ -0.18
PTCH1-201ENST00000331920 PPP1R27Q86WC6 154 aa13.95□□□□□ -0.18
PTCH1-201ENST00000331920 C5orf30Q96GV9 206 aa13.95□□□□□ -0.18
PTCH1-201ENST00000331920 ANAPC10Q9UM13 185 aa13.95□□□□□ -0.18
PTCH1-201ENST00000331920 TCF19Q9Y242 345 aa13.95□□□□□ -0.18
PTCH1-201ENST00000331920 PCNX2A6NKB5 2137 aa13.95□□□□□ -0.18
PTCH1-201ENST00000331920 PAX1P15863 534 aa13.95□□□□□ -0.18
PTCH1-201ENST00000331920 NANOS3P60323 173 aaKnown RBP13.95□□□□□ -0.18
PTCH1-201ENST00000331920 GGTLC1Q9BX51 225 aa13.95□□□□□ -0.18
PTCH1-201ENST00000331920 PRR19A6NJB7 356 aa13.95□□□□□ -0.18
PTCH1-201ENST00000331920 FBLN7Q53RD9 439 aa13.95□□□□□ -0.18
PTCH1-201ENST00000331920 OR9G1Q8NH87 305 aa13.95□□□□□ -0.18
PTCH1-201ENST00000331920 A0A0G2JLM5 398 aa13.95□□□□□ -0.18
PTCH1-201ENST00000331920 RPP21Q9H633 154 aaKnown RBP13.95□□□□□ -0.18
PTCH1-201ENST00000331920 ITGB4P16144 1822 aa13.95□□□□□ -0.18
PTCH1-201ENST00000331920 PRR33A8MZF0 331 aa13.95□□□□□ -0.18
PTCH1-201ENST00000331920 NCR2O95944 276 aa13.95□□□□□ -0.18
PTCH1-201ENST00000331920 KLF14Q8TD94 323 aaPredicted RBP13.95□□□□□ -0.18
PTCH1-201ENST00000331920 KBTBD11-OT1A0A1B0GTJ5 212 aa13.94□□□□□ -0.18
PTCH1-201ENST00000331920 TCRBV4S1A1TA0A5B7 111 aa13.94□□□□□ -0.18
PTCH1-201ENST00000331920 NDUFA2O43678 99 aa13.94□□□□□ -0.18
PTCH1-201ENST00000331920 UCNP55089 124 aa13.94□□□□□ -0.18
PTCH1-201ENST00000331920 ARPC1AQ92747 370 aa13.94□□□□□ -0.18
PTCH1-201ENST00000331920 Q9H3A6 140 aa13.94□□□□□ -0.18
PTCH1-201ENST00000331920 IGFBP2P18065 325 aa13.94□□□□□ -0.18
PTCH1-201ENST00000331920 CD33P20138 364 aa13.94□□□□□ -0.18
PTCH1-201ENST00000331920 GAGE2BQ13066 116 aa13.94□□□□□ -0.18
PTCH1-201ENST00000331920 EGR4Q05215 589 aa13.94□□□□□ -0.18
PTCH1-201ENST00000331920 RBMY1FQ15415 496 aaKnown RBP13.94□□□□□ -0.18
PTCH1-201ENST00000331920 IL36BQ9NZH7 164 aa13.94□□□□□ -0.18
PTCH1-201ENST00000331920 DPM2O94777 84 aa13.93□□□□□ -0.18
PTCH1-201ENST00000331920 VAX1Q5SQQ9 334 aa13.93□□□□□ -0.18
PTCH1-201ENST00000331920 TFF3Q07654 80 aa13.93□□□□□ -0.18
PTCH1-201ENST00000331920 A0A087WX48 190 aa13.93□□□□□ -0.18
PTCH1-201ENST00000331920 MSRB3Q8IXL7 192 aa13.93□□□□□ -0.18
PTCH1-201ENST00000331920 FAM168AQ92567 244 aa13.93□□□□□ -0.18
PTCH1-201ENST00000331920 HIST1H2BAQ96A08 127 aa13.93□□□□□ -0.18
PTCH1-201ENST00000331920 GNG5P63218 68 aa13.93□□□□□ -0.18
PTCH1-201ENST00000331920 ERG28Q9UKR5 140 aa13.93□□□□□ -0.18
PTCH1-201ENST00000331920 LRRK1Q38SD2 2015 aa13.93□□□□□ -0.18
PTCH1-201ENST00000331920 A0A0J9YW62 118 aa13.93□□□□□ -0.18
PTCH1-201ENST00000331920 RNASE7Q9H1E1 156 aaKnown RBP13.93□□□□□ -0.18
PTCH1-201ENST00000331920 TRAV5A0A0B4J249 113 aa13.93□□□□□ -0.18
PTCH1-201ENST00000331920 IL6RP08887 468 aaPredicted RBP13.93□□□□□ -0.18
PTCH1-201ENST00000331920 MAJINQ3KP22 176 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms