RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 CRYGBP07316 175 aa13.66□□□□□ -0.22
DDX41-201ENST00000330503 M6PRP20645 277 aa13.66□□□□□ -0.22
DDX41-201ENST00000330503 CNTFRP26992 372 aa13.66□□□□□ -0.22
DDX41-201ENST00000330503 KLRD1Q13241 179 aa13.66□□□□□ -0.22
DDX41-201ENST00000330503 ZNF709Q8N972 641 aa13.66□□□□□ -0.22
DDX41-201ENST00000330503 CLDND2Q8NHS1 167 aa13.66□□□□□ -0.22
DDX41-201ENST00000330503 COMMD5Q9GZQ3 224 aa13.66□□□□□ -0.22
DDX41-201ENST00000330503 TACC2O95359 2948 aa13.65□□□□□ -0.22
DDX41-201ENST00000330503 SMCO3A2RU48 225 aa13.65□□□□□ -0.22
DDX41-201ENST00000330503 PAX2Q02962 417 aa13.65□□□□□ -0.22
DDX41-201ENST00000330503 HAGHQ16775 308 aa13.65□□□□□ -0.22
DDX41-201ENST00000330503 VMA21Q3ZAQ7 101 aa13.65□□□□□ -0.22
DDX41-201ENST00000330503 C1orf122Q6ZSJ8 110 aa13.65□□□□□ -0.22
DDX41-201ENST00000330503 RPEQ96AT9 228 aa13.65□□□□□ -0.22
DDX41-201ENST00000330503 MGST2Q99735 147 aa13.65□□□□□ -0.22
DDX41-201ENST00000330503 INS-IGF2F8WCM5 200 aa13.64□□□□□ -0.23
DDX41-201ENST00000330503 IGHV4-39P01824 125 aa13.64□□□□□ -0.23
DDX41-201ENST00000330503 RNASE2P10153 161 aaKnown RBP13.64□□□□□ -0.23
DDX41-201ENST00000330503 FGF8P55075 233 aaPredicted RBP13.64□□□□□ -0.23
DDX41-201ENST00000330503 ICAM4Q14773 271 aa13.64□□□□□ -0.23
DDX41-201ENST00000330503 C2orf83Q53S99 150 aa13.64□□□□□ -0.23
DDX41-201ENST00000330503 C10orf55Q5SWW7 151 aa13.64□□□□□ -0.23
DDX41-201ENST00000330503 TPTE2P1Q5T6R2 138 aa13.64□□□□□ -0.23
DDX41-201ENST00000330503 ZNF843Q8N446 348 aa13.64□□□□□ -0.23
DDX41-201ENST00000330503 TEX45Q8NA69 505 aa13.64□□□□□ -0.23
DDX41-201ENST00000330503 LSM4Q9Y4Z0 139 aaKnown RBP13.64□□□□□ -0.23
DDX41-201ENST00000330503 SPTAN1Q13813 2472 aaKnown RBP13.64□□□□□ -0.23
DDX41-201ENST00000330503 DOPEY1Q5JWR5 2465 aa13.64□□□□□ -0.23
DDX41-201ENST00000330503 A0A1W2PPI3 338 aa13.64□□□□□ -0.23
DDX41-201ENST00000330503 C17orf112F2Z3M2 114 aa13.64□□□□□ -0.23
DDX41-201ENST00000330503 DNASE2O00115 360 aaPredicted RBP13.64□□□□□ -0.23
DDX41-201ENST00000330503 GOSR1O95249 250 aa13.64□□□□□ -0.23
DDX41-201ENST00000330503 LMO4P61968 165 aa13.64□□□□□ -0.23
DDX41-201ENST00000330503 PSG5Q15238 335 aa13.64□□□□□ -0.23
DDX41-201ENST00000330503 ZNF506Q5JVG8 444 aa13.64□□□□□ -0.23
DDX41-201ENST00000330503 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.64□□□□□ -0.23
DDX41-201ENST00000330503 OR10G4Q8NGN3 311 aa13.64□□□□□ -0.23
DDX41-201ENST00000330503 OR10G9Q8NGN4 311 aa13.64□□□□□ -0.23
DDX41-201ENST00000330503 OR10G7Q8NGN6 311 aa13.64□□□□□ -0.23
DDX41-201ENST00000330503 SLC35B3Q9H1N7 401 aa13.64□□□□□ -0.23
DDX41-201ENST00000330503 SMDT1Q9H4I9 107 aa13.64□□□□□ -0.23
DDX41-201ENST00000330503 NPVFQ9HCQ7 196 aa13.64□□□□□ -0.23
DDX41-201ENST00000330503 ZFYVE26Q68DK2 2539 aa13.64□□□□□ -0.23
DDX41-201ENST00000330503 USP9XQ93008 2570 aaPredicted RBP13.64□□□□□ -0.23
DDX41-201ENST00000330503 ODF3BA8MYP8 253 aa13.63□□□□□ -0.23
DDX41-201ENST00000330503 MPDU1O75352 247 aa13.63□□□□□ -0.23
DDX41-201ENST00000330503 MBP02144 154 aa13.63□□□□□ -0.23
DDX41-201ENST00000330503 NPBWR1P48145 328 aa13.63□□□□□ -0.23
DDX41-201ENST00000330503 ATP5IP56385 69 aaPredicted RBP13.63□□□□□ -0.23
DDX41-201ENST00000330503 ZNF787Q6DD87 383 aa13.63□□□□□ -0.23
DDX41-201ENST00000330503 SLC39A9Q9NUM3 307 aa13.63□□□□□ -0.23
DDX41-201ENST00000330503 AKAP6Q13023 2319 aa13.63□□□□□ -0.23
DDX41-201ENST00000330503 HTR1DP28221 377 aa13.63□□□□□ -0.23
DDX41-201ENST00000330503 WT1-ASQ06250 92 aa13.63□□□□□ -0.23
DDX41-201ENST00000330503 KIR3DL3Q8N743 410 aa13.63□□□□□ -0.23
DDX41-201ENST00000330503 BPESC1Q9GZL8 116 aa13.63□□□□□ -0.23
DDX41-201ENST00000330503 DPM3Q9P2X0 92 aa13.63□□□□□ -0.23
DDX41-201ENST00000330503 TMA7Q9Y2S6 64 aaKnown RBP13.63□□□□□ -0.23
DDX41-201ENST00000330503 KPTNQ9Y664 436 aa13.63□□□□□ -0.23
DDX41-201ENST00000330503 MAP1LC3B2A6NCE7 125 aa13.62□□□□□ -0.23
DDX41-201ENST00000330503 FAM74A7A6NL05 159 aa13.62□□□□□ -0.23
DDX41-201ENST00000330503 YIF1AO95070 293 aa13.62□□□□□ -0.23
DDX41-201ENST00000330503 LCN2P80188 198 aa13.62□□□□□ -0.23
DDX41-201ENST00000330503 PRSS8Q16651 343 aa13.62□□□□□ -0.23
DDX41-201ENST00000330503 FAM74A3Q4VXF1 159 aa13.62□□□□□ -0.23
DDX41-201ENST00000330503 SUN5Q8TC36 379 aa13.62□□□□□ -0.23
DDX41-201ENST00000330503 SPOCK3Q9BQ16 436 aa13.62□□□□□ -0.23
DDX41-201ENST00000330503 MAP1LC3BQ9GZQ8 125 aa13.62□□□□□ -0.23
DDX41-201ENST00000330503 UNKLQ9H9P5 680 aaKnown RBP13.62□□□□□ -0.23
DDX41-201ENST00000330503 LOC102723971A0A1B0GUV8 181 aa13.61□□□□□ -0.23
DDX41-201ENST00000330503 NUPL2O15504 423 aaKnown RBP13.61□□□□□ -0.23
DDX41-201ENST00000330503 SRP19P09132 144 aaKnown RBP13.61□□□□□ -0.23
DDX41-201ENST00000330503 FBP1P09467 338 aa13.61□□□□□ -0.23
DDX41-201ENST00000330503 OR13C7P0DN81 318 aa13.61□□□□□ -0.23
DDX41-201ENST00000330503 OPRK1P41145 380 aa13.61□□□□□ -0.23
DDX41-201ENST00000330503 MLANAQ16655 118 aa13.61□□□□□ -0.23
DDX41-201ENST00000330503 GCSAMLQ5JQS6 135 aa13.61□□□□□ -0.23
DDX41-201ENST00000330503 VMO1Q7Z5L0 202 aa13.61□□□□□ -0.23
DDX41-201ENST00000330503 LHFPL4Q7Z7J7 247 aa13.61□□□□□ -0.23
DDX41-201ENST00000330503 GGTLC1Q9BX51 225 aa13.61□□□□□ -0.23
DDX41-201ENST00000330503 GNG13Q9P2W3 67 aa13.61□□□□□ -0.23
DDX41-201ENST00000330503 SIGLEC9Q9Y336 463 aa13.61□□□□□ -0.23
DDX41-201ENST00000330503 KLF2Q9Y5W3 355 aaPredicted RBP13.61□□□□□ -0.23
DDX41-201ENST00000330503 CTXND1A0A1B0GTU2 59 aa13.61□□□□□ -0.23
DDX41-201ENST00000330503 FNDC10F2Z333 226 aa13.61□□□□□ -0.23
DDX41-201ENST00000330503 TIMM23O14925 209 aa13.61□□□□□ -0.23
DDX41-201ENST00000330503 HMGB3O15347 200 aaKnown RBP13.61□□□□□ -0.23
DDX41-201ENST00000330503 SNAPINO95295 136 aa13.61□□□□□ -0.23
DDX41-201ENST00000330503 ERHP84090 104 aaKnown RBP13.61□□□□□ -0.23
DDX41-201ENST00000330503 MIC13Q5XKP0 118 aa13.61□□□□□ -0.23
DDX41-201ENST00000330503 FAM122CQ6P4D5 195 aa13.61□□□□□ -0.23
DDX41-201ENST00000330503 RXFP4Q8TDU9 374 aa13.61□□□□□ -0.23
DDX41-201ENST00000330503 ACTR3CQ9C0K3 210 aaPredicted RBP13.61□□□□□ -0.23
DDX41-201ENST00000330503 SLC25A22Q9H936 323 aa13.61□□□□□ -0.23
DDX41-201ENST00000330503 HILPDAQ9Y5L2 63 aa13.61□□□□□ -0.23
DDX41-201ENST00000330503 A0A1W2PN81 502 aa13.6□□□□□ -0.23
DDX41-201ENST00000330503 A0A1W2PRD5 423 aa13.6□□□□□ -0.23
DDX41-201ENST00000330503 A0A1W2PRF3 423 aa13.6□□□□□ -0.23
DDX41-201ENST00000330503 A0A1W2PRM7 423 aa13.6□□□□□ -0.23
DDX41-201ENST00000330503 DEFA4P12838 97 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms