RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 OR10G8Q8NGN5 311 aa12.63□□□□□ -0.39
BRCC3-201ENST00000330045 SCNM1Q9BWG6 230 aa12.63□□□□□ -0.39
BRCC3-201ENST00000330045 SMG1Q96Q15 3661 aaKnown RBP12.63□□□□□ -0.39
BRCC3-201ENST00000330045 KBTBD11-OT1A0A1B0GTJ5 212 aa12.62□□□□□ -0.39
BRCC3-201ENST00000330045 MT-CO2P00403 227 aa12.62□□□□□ -0.39
BRCC3-201ENST00000330045 CA2P00918 260 aa12.62□□□□□ -0.39
BRCC3-201ENST00000330045 RPL29P47914 159 aaKnown RBP12.62□□□□□ -0.39
BRCC3-201ENST00000330045 RPL31P62899 125 aaKnown RBP12.62□□□□□ -0.39
BRCC3-201ENST00000330045 NHLH1Q02575 133 aa12.62□□□□□ -0.39
BRCC3-201ENST00000330045 TEX38Q6PEX7 206 aa12.62□□□□□ -0.39
BRCC3-201ENST00000330045 VHLLQ6RSH7 139 aa12.62□□□□□ -0.39
BRCC3-201ENST00000330045 NCOR1P1Q9H4R4 102 aa12.62□□□□□ -0.39
BRCC3-201ENST00000330045 A0A1B0GV90 55 aa12.61□□□□□ -0.39
BRCC3-201ENST00000330045 MBD3L4A6NDZ8 208 aaPredicted RBP12.61□□□□□ -0.39
BRCC3-201ENST00000330045 MBD3L3A6NE82 208 aaPredicted RBP12.61□□□□□ -0.39
BRCC3-201ENST00000330045 MBD3L5A6NJ08 208 aaPredicted RBP12.61□□□□□ -0.39
BRCC3-201ENST00000330045 FOXH1O75593 365 aa12.61□□□□□ -0.39
BRCC3-201ENST00000330045 GLRXP35754 106 aa12.61□□□□□ -0.39
BRCC3-201ENST00000330045 MRPS11P82912 194 aaKnown RBP12.61□□□□□ -0.39
BRCC3-201ENST00000330045 TCF23Q7RTU1 214 aa12.61□□□□□ -0.39
BRCC3-201ENST00000330045 LYG1Q8N1E2 194 aa12.61□□□□□ -0.39
BRCC3-201ENST00000330045 MBD3L2Q8NHZ7 208 aaPredicted RBP12.61□□□□□ -0.39
BRCC3-201ENST00000330045 WFIKKN1Q96NZ8 548 aa12.61□□□□□ -0.39
BRCC3-201ENST00000330045 IDI2-AS1Q9NZ38 188 aa12.61□□□□□ -0.39
BRCC3-201ENST00000330045 YPEL3P61236 119 aaPredicted RBP12.61□□□□□ -0.39
BRCC3-201ENST00000330045 IQCJQ1A5X6 159 aa12.61□□□□□ -0.39
BRCC3-201ENST00000330045 TIMM23BQ5SRD1 257 aa12.61□□□□□ -0.39
BRCC3-201ENST00000330045 TMEM256Q8N2U0 113 aa12.61□□□□□ -0.39
BRCC3-201ENST00000330045 OR4P4Q8NGL7 312 aa12.61□□□□□ -0.39
BRCC3-201ENST00000330045 ADTRPQ96IZ2 230 aa12.61□□□□□ -0.39
BRCC3-201ENST00000330045 HINT2Q9BX68 163 aa12.61□□□□□ -0.39
BRCC3-201ENST00000330045 TRGV10A0A0A0MS01 117 aa12.6□□□□□ -0.39
BRCC3-201ENST00000330045 IGFBP2P18065 325 aa12.6□□□□□ -0.39
BRCC3-201ENST00000330045 ADMP35318 185 aa12.6□□□□□ -0.39
BRCC3-201ENST00000330045 A0A1B0GUS0 222 aa12.6□□□□□ -0.39
BRCC3-201ENST00000330045 MYOD1P15172 320 aa12.6□□□□□ -0.39
BRCC3-201ENST00000330045 PRR20EP86478 221 aa12.6□□□□□ -0.39
BRCC3-201ENST00000330045 PRR20CP86479 221 aa12.6□□□□□ -0.39
BRCC3-201ENST00000330045 PRR20DP86480 221 aa12.6□□□□□ -0.39
BRCC3-201ENST00000330045 PRR20BP86481 221 aa12.6□□□□□ -0.39
BRCC3-201ENST00000330045 PRR20AP86496 221 aa12.6□□□□□ -0.39
BRCC3-201ENST00000330045 DUX4L9Q6RFH8 374 aaPredicted RBP12.6□□□□□ -0.39
BRCC3-201ENST00000330045 CORO2AQ92828 525 aa12.6□□□□□ -0.39
BRCC3-201ENST00000330045 NEUROG1Q92886 237 aa12.6□□□□□ -0.39
BRCC3-201ENST00000330045 C11orf52Q96A22 123 aa12.6□□□□□ -0.39
BRCC3-201ENST00000330045 UHRF2Q96PU4 802 aa12.6□□□□□ -0.39
BRCC3-201ENST00000330045 NDUFAF3Q9BU61 184 aa12.6□□□□□ -0.39
BRCC3-201ENST00000330045 OR51B2Q9Y5P1 312 aa12.6□□□□□ -0.39
BRCC3-201ENST00000330045 K7EN84 100 aa12.59□□□□□ -0.39
BRCC3-201ENST00000330045 OR4A8P0C604 315 aa12.59□□□□□ -0.39
BRCC3-201ENST00000330045 COL8A2P25067 703 aa12.59□□□□□ -0.39
BRCC3-201ENST00000330045 ZNF90Q03938 601 aa12.59□□□□□ -0.39
BRCC3-201ENST00000330045 SSX2Q16385 188 aa12.59□□□□□ -0.39
BRCC3-201ENST00000330045 ZNF474Q6S9Z5 364 aaPredicted RBP12.59□□□□□ -0.39
BRCC3-201ENST00000330045 FAM222BQ8WU58 562 aa12.59□□□□□ -0.39
BRCC3-201ENST00000330045 IL36BQ9NZH7 164 aa12.59□□□□□ -0.39
BRCC3-201ENST00000330045 TP53TG5Q9Y2B4 290 aa12.59□□□□□ -0.39
BRCC3-201ENST00000330045 DSCAML1Q8TD84 2053 aa12.59□□□□□ -0.39
BRCC3-201ENST00000330045 FNDC10F2Z333 226 aa12.59□□□□□ -0.39
BRCC3-201ENST00000330045 POU2AF1Q16633 256 aa12.59□□□□□ -0.39
BRCC3-201ENST00000330045 HLA-DRB5Q30154 266 aa12.59□□□□□ -0.39
BRCC3-201ENST00000330045 LBHQ53QV2 105 aaPredicted RBP12.59□□□□□ -0.39
BRCC3-201ENST00000330045 ZNF439Q8NDP4 499 aa12.59□□□□□ -0.39
BRCC3-201ENST00000330045 BEND2Q8NDZ0 799 aa12.59□□□□□ -0.39
BRCC3-201ENST00000330045 FKBP11Q9NYL4 201 aa12.59□□□□□ -0.39
BRCC3-201ENST00000330045 RNF7Q9UBF6 113 aa12.59□□□□□ -0.39
BRCC3-201ENST00000330045 DSCAMO60469 2012 aa12.58□□□□□ -0.4
BRCC3-201ENST00000330045 IGLV3-9A0A075B6K5 115 aa12.58□□□□□ -0.4
BRCC3-201ENST00000330045 C9JCJ5 164 aa12.58□□□□□ -0.4
BRCC3-201ENST00000330045 J3QR06 171 aa12.58□□□□□ -0.4
BRCC3-201ENST00000330045 SLC17A3O00476 420 aa12.58□□□□□ -0.4
BRCC3-201ENST00000330045 NUPR1O60356 82 aa12.58□□□□□ -0.4
BRCC3-201ENST00000330045 LINC00869P0C866 280 aa12.58□□□□□ -0.4
BRCC3-201ENST00000330045 GATA4P43694 442 aa12.58□□□□□ -0.4
BRCC3-201ENST00000330045 GNG10P50151 68 aa12.58□□□□□ -0.4
BRCC3-201ENST00000330045 MIR17HGQ75NE6 70 aa12.58□□□□□ -0.4
BRCC3-201ENST00000330045 RPRMLQ8N4K4 120 aa12.58□□□□□ -0.4
BRCC3-201ENST00000330045 ZADH2Q8N4Q0 377 aa12.58□□□□□ -0.4
BRCC3-201ENST00000330045 RBMXL3Q8N7X1 1067 aaKnown RBP12.58□□□□□ -0.4
BRCC3-201ENST00000330045 PRNDQ9UKY0 176 aa12.58□□□□□ -0.4
BRCC3-201ENST00000330045 LY96Q9Y6Y9 160 aa12.58□□□□□ -0.4
BRCC3-201ENST00000330045 CADP27708 2225 aa12.58□□□□□ -0.4
BRCC3-201ENST00000330045 TRAV9-1A0A075B6T8 112 aa12.57□□□□□ -0.4
BRCC3-201ENST00000330045 A8MXE2 369 aa12.57□□□□□ -0.4
BRCC3-201ENST00000330045 ACTL6BO94805 426 aa12.57□□□□□ -0.4
BRCC3-201ENST00000330045 SCGB1D1O95968 90 aa12.57□□□□□ -0.4
BRCC3-201ENST00000330045 AREGP15514 252 aa12.57□□□□□ -0.4
BRCC3-201ENST00000330045 SSTP61278 116 aa12.57□□□□□ -0.4
BRCC3-201ENST00000330045 DEFB108BQ8NET1 73 aa12.57□□□□□ -0.4
BRCC3-201ENST00000330045 ZCCHC14Q8WYQ9 949 aaKnown RBP12.57□□□□□ -0.4
BRCC3-201ENST00000330045 MISP3Q96FF7 219 aa12.57□□□□□ -0.4
BRCC3-201ENST00000330045 C2orf88Q9BSF0 95 aa12.57□□□□□ -0.4
BRCC3-201ENST00000330045 SFXN3Q9BWM7 321 aa12.57□□□□□ -0.4
BRCC3-201ENST00000330045 PLEKHA3Q9HB20 300 aa12.57□□□□□ -0.4
BRCC3-201ENST00000330045 GCM1Q9NP62 436 aa12.57□□□□□ -0.4
BRCC3-201ENST00000330045 TAS2R60P59551 318 aa12.57□□□□□ -0.4
BRCC3-201ENST00000330045 STUMQ69YW2 141 aa12.57□□□□□ -0.4
BRCC3-201ENST00000330045 EAF1Q96JC9 268 aaPredicted RBP12.57□□□□□ -0.4
BRCC3-201ENST00000330045 ADGRG4Q8IZF6 3080 aa12.57□□□□□ -0.4
BRCC3-201ENST00000330045 PTPRQQ9UMZ3 2332 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms