RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 LEAP2Q969E1 77 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 IFITM10A6NMD0 228 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 C2orf68Q2NKX9 166 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 ZNF257Q9Y2Q1 563 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 PRR32B1ATL7 298 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 NDUFS8O00217 210 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 KLK2P20151 261 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 ZNF324BQ6AW86 544 aaPredicted RBP9.55□□□□□ -0.88
COL4A5-201ENST00000328300 PEMTQ9UBM1 199 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 NINQ8N4C6 2090 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 IGHV3-21A0A0B4J1V1 117 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 GCGP01275 180 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 TRGC1P0CF51 173 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 APELAP0DMC3 54 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 DDB2Q92466 427 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 RPUSD1Q9UJJ7 312 aaKnown RBP9.55□□□□□ -0.88
COL4A5-201ENST00000328300 SOX21Q9Y651 276 aaPredicted RBP9.55□□□□□ -0.88
COL4A5-201ENST00000328300 SAA2-SAA4A0A096LPE2 208 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 A0A1B0GW15 77 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 SAA2P0DJI9 122 aaPredicted RBP9.55□□□□□ -0.88
COL4A5-201ENST00000328300 SLC25A16P16260 332 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 SCGB1D4Q6XE38 83 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 PRSS22Q9GZN4 317 aa9.55□□□□□ -0.88
COL4A5-201ENST00000328300 TRAV9-1A0A075B6T8 112 aa9.54□□□□□ -0.88
COL4A5-201ENST00000328300 NPIPB6E9PJ23 425 aa9.54□□□□□ -0.88
COL4A5-201ENST00000328300 ZNHIT1O43257 154 aa9.54□□□□□ -0.88
COL4A5-201ENST00000328300 NDUFB4O95168 129 aa9.54□□□□□ -0.88
COL4A5-201ENST00000328300 MYOD1P15172 320 aa9.54□□□□□ -0.88
COL4A5-201ENST00000328300 FOXF2Q12947 444 aa9.54□□□□□ -0.88
COL4A5-201ENST00000328300 TMEM155Q4W5P6 130 aa9.54□□□□□ -0.88
COL4A5-201ENST00000328300 ASCL4Q6XD76 172 aa9.54□□□□□ -0.88
COL4A5-201ENST00000328300 TMEM144Q7Z5S9 345 aa9.54□□□□□ -0.88
COL4A5-201ENST00000328300 MYOZ3Q8TDC0 251 aa9.54□□□□□ -0.88
COL4A5-201ENST00000328300 ITGB1BP1O14713 200 aa9.54□□□□□ -0.88
COL4A5-201ENST00000328300 HEPN1Q6WQI6 88 aa9.54□□□□□ -0.88
COL4A5-201ENST00000328300 PAQR4Q8N4S7 273 aaPredicted RBP9.54□□□□□ -0.88
COL4A5-201ENST00000328300 CLDND2Q8NHS1 167 aa9.54□□□□□ -0.88
COL4A5-201ENST00000328300 FBXL7Q9UJT9 491 aa9.54□□□□□ -0.88
COL4A5-201ENST00000328300 CLDN16Q9Y5I7 305 aa9.54□□□□□ -0.88
COL4A5-201ENST00000328300 ARL14EPLP0DKL9 152 aa9.54□□□□□ -0.88
COL4A5-201ENST00000328300 LY6EQ16553 131 aa9.54□□□□□ -0.88
COL4A5-201ENST00000328300 DTX1Q86Y01 620 aa9.54□□□□□ -0.88
COL4A5-201ENST00000328300 SGMS2Q8NHU3 365 aa9.54□□□□□ -0.88
COL4A5-201ENST00000328300 THADAQ6YHU6 1953 aa9.54□□□□□ -0.88
COL4A5-201ENST00000328300 IGKV3-15P01624 115 aa9.54□□□□□ -0.88
COL4A5-201ENST00000328300 NUTF2P61970 127 aaKnown RBP9.54□□□□□ -0.88
COL4A5-201ENST00000328300 A0A0G2JNJ9 132 aa9.53□□□□□ -0.88
COL4A5-201ENST00000328300 FBXL15Q9H469 300 aa9.53□□□□□ -0.88
COL4A5-201ENST00000328300 ZNF319Q9P2F9 582 aa9.53□□□□□ -0.88
COL4A5-201ENST00000328300 Q9UFV3 132 aa9.53□□□□□ -0.88
COL4A5-201ENST00000328300 PPP1R17O96001 155 aa9.53□□□□□ -0.88
COL4A5-201ENST00000328300 TRGC2P03986 189 aa9.53□□□□□ -0.88
COL4A5-201ENST00000328300 AMY1AP04745 511 aa9.53□□□□□ -0.88
COL4A5-201ENST00000328300 PRCDQ00LT1 54 aa9.53□□□□□ -0.88
COL4A5-201ENST00000328300 SMIM12Q96EX1 92 aa9.53□□□□□ -0.88
COL4A5-201ENST00000328300 PLXNA2O75051 1894 aa9.53□□□□□ -0.88
COL4A5-201ENST00000328300 CCDC88CQ9P219 2028 aa9.53□□□□□ -0.88
COL4A5-201ENST00000328300 TMEM178BH3BS89 294 aa9.53□□□□□ -0.88
COL4A5-201ENST00000328300 IL4P05112 153 aa9.53□□□□□ -0.88
COL4A5-201ENST00000328300 ZNF672Q499Z4 452 aaPredicted RBP9.53□□□□□ -0.88
COL4A5-201ENST00000328300 Q6AWC8 147 aa9.53□□□□□ -0.88
COL4A5-201ENST00000328300 WFIKKN1Q96NZ8 548 aa9.53□□□□□ -0.88
COL4A5-201ENST00000328300 MDKP21741 143 aaPredicted RBP9.53□□□□□ -0.88
COL4A5-201ENST00000328300 CMC4P56277 68 aaPredicted RBP9.53□□□□□ -0.88
COL4A5-201ENST00000328300 WFDC3Q8IUB2 231 aa9.53□□□□□ -0.88
COL4A5-201ENST00000328300 FGFBP3Q8TAT2 258 aa9.53□□□□□ -0.88
COL4A5-201ENST00000328300 SLC50A1Q9BRV3 221 aa9.53□□□□□ -0.88
COL4A5-201ENST00000328300 AP5S1Q9NUS5 200 aa9.53□□□□□ -0.88
COL4A5-201ENST00000328300 DDTP30046 118 aa9.53□□□□□ -0.88
COL4A5-201ENST00000328300 DUX5Q96PT3 197 aa9.53□□□□□ -0.88
COL4A5-201ENST00000328300 SH3BGRL3Q9H299 93 aa9.53□□□□□ -0.88
COL4A5-201ENST00000328300 ZNF137PP52743 207 aa9.52□□□□□ -0.88
COL4A5-201ENST00000328300 SAA1P0DJI8 122 aaPredicted RBP9.52□□□□□ -0.89
COL4A5-201ENST00000328300 FMC1Q96HJ9 113 aa9.52□□□□□ -0.89
COL4A5-201ENST00000328300 AURKAIP1Q9NWT8 199 aaPredicted RBP9.52□□□□□ -0.89
COL4A5-201ENST00000328300 TBL2Q9Y4P3 447 aaKnown RBP9.52□□□□□ -0.89
COL4A5-201ENST00000328300 TICRRQ7Z2Z1 1910 aa9.52□□□□□ -0.89
COL4A5-201ENST00000328300 SEC16AO15027 2179 aa9.52□□□□□ -0.89
COL4A5-201ENST00000328300 CD5P06127 495 aa9.52□□□□□ -0.89
COL4A5-201ENST00000328300 MGPP08493 103 aa9.52□□□□□ -0.89
COL4A5-201ENST00000328300 AREGP15514 252 aa9.52□□□□□ -0.89
COL4A5-201ENST00000328300 DUTP33316 252 aaKnown RBP9.52□□□□□ -0.89
COL4A5-201ENST00000328300 NR2C2APQ86WQ0 139 aa9.52□□□□□ -0.89
COL4A5-201ENST00000328300 TGFAP01135 160 aa9.52□□□□□ -0.89
COL4A5-201ENST00000328300 RRN3P1Q2M238 152 aa9.52□□□□□ -0.89
COL4A5-201ENST00000328300 CYB5R2Q6BCY4 276 aa9.52□□□□□ -0.89
COL4A5-201ENST00000328300 NAPSAO96009 420 aa9.52□□□□□ -0.89
COL4A5-201ENST00000328300 PAX1P15863 534 aa9.52□□□□□ -0.89
COL4A5-201ENST00000328300 LHFPL1Q86WI0 220 aa9.52□□□□□ -0.89
COL4A5-201ENST00000328300 OR8A1Q8NGG7 326 aa9.52□□□□□ -0.89
COL4A5-201ENST00000328300 GFI1Q99684 422 aa9.52□□□□□ -0.89
COL4A5-201ENST00000328300 CDKN1AP38936 164 aa9.51□□□□□ -0.89
COL4A5-201ENST00000328300 TAS2R60P59551 318 aa9.51□□□□□ -0.89
COL4A5-201ENST00000328300 SRSF9Q13242 221 aaKnown RBP eCLIP9.51□□□□□ -0.89
COL4A5-201ENST00000328300 LINC00305Q7Z4B0 112 aa9.51□□□□□ -0.89
COL4A5-201ENST00000328300 HSPB9Q9BQS6 159 aa9.51□□□□□ -0.89
COL4A5-201ENST00000328300 PF4P02776 101 aa9.51□□□□□ -0.89
COL4A5-201ENST00000328300 ANOS1P23352 680 aa9.51□□□□□ -0.89
COL4A5-201ENST00000328300 MFAP2P55001 183 aa9.51□□□□□ -0.89
COL4A5-201ENST00000328300 CX3CL1P78423 397 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms