RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 MYO9AB2RTY4 2548 aa8.6□□□□□ -1.03
ABCF1-201ENST00000326195 BAHCC1Q9P281 2608 aa8.6□□□□□ -1.03
ABCF1-201ENST00000326195 ANKRD17O75179 2603 aaKnown RBP8.59□□□□□ -1.03
ABCF1-201ENST00000326195 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.59□□□□□ -1.03
ABCF1-201ENST00000326195 HBG1P69891 147 aa8.59□□□□□ -1.03
ABCF1-201ENST00000326195 HBG2P69892 147 aa8.59□□□□□ -1.03
ABCF1-201ENST00000326195 MSMO1Q15800 293 aa8.59□□□□□ -1.03
ABCF1-201ENST00000326195 SLC25A40Q8TBP6 338 aa8.59□□□□□ -1.03
ABCF1-201ENST00000326195 C1QTNF5Q9BXJ0 243 aa8.59□□□□□ -1.03
ABCF1-201ENST00000326195 ELOVL5Q9NYP7 299 aa8.59□□□□□ -1.03
ABCF1-201ENST00000326195 IL36GQ9NZH8 169 aa8.59□□□□□ -1.03
ABCF1-201ENST00000326195 HRNRQ86YZ3 2850 aaPredicted RBP8.59□□□□□ -1.03
ABCF1-201ENST00000326195 IGKV1D-13A0A0B4J2D9 117 aa8.59□□□□□ -1.03
ABCF1-201ENST00000326195 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.59□□□□□ -1.03
ABCF1-201ENST00000326195 OR5B21A6NL26 309 aa8.59□□□□□ -1.03
ABCF1-201ENST00000326195 KIAA1324LA8MWY0 1029 aaPredicted RBP8.59□□□□□ -1.03
ABCF1-201ENST00000326195 DIRC3C9JPN6 131 aa8.59□□□□□ -1.03
ABCF1-201ENST00000326195 RBFOX2O43251 390 aaKnown RBP eCLIP8.59□□□□□ -1.032e-8■■■■□ 20.3
ABCF1-201ENST00000326195 IGKV1-13P0DP09 117 aa8.59□□□□□ -1.03
ABCF1-201ENST00000326195 SGMS2Q8NHU3 365 aa8.59□□□□□ -1.03
ABCF1-201ENST00000326195 SLC39A9Q9NUM3 307 aa8.59□□□□□ -1.03
ABCF1-201ENST00000326195 CACNG5Q9UF02 275 aa8.59□□□□□ -1.03
ABCF1-201ENST00000326195 POLDIP2Q9Y2S7 368 aa8.59□□□□□ -1.03
ABCF1-201ENST00000326195 DUXBA0A1W2PPF3 345 aa8.59□□□□□ -1.04
ABCF1-201ENST00000326195 TIMM8AO60220 97 aaPredicted RBP8.59□□□□□ -1.04
ABCF1-201ENST00000326195 HNRNPA3P51991 378 aaKnown RBP8.59□□□□□ -1.04
ABCF1-201ENST00000326195 LTC4SQ16873 150 aa8.59□□□□□ -1.04
ABCF1-201ENST00000326195 C1orf174Q8IYL3 243 aa8.59□□□□□ -1.04
ABCF1-201ENST00000326195 ZNF525Q8N782 197 aa8.59□□□□□ -1.04
ABCF1-201ENST00000326195 ZNF738Q8NE65 137 aa8.59□□□□□ -1.04
ABCF1-201ENST00000326195 OR10V1Q8NGI7 309 aa8.59□□□□□ -1.04
ABCF1-201ENST00000326195 ITLN2Q8WWU7 325 aaPredicted RBP8.59□□□□□ -1.04
ABCF1-201ENST00000326195 HS3ST6Q96QI5 342 aa8.59□□□□□ -1.04
ABCF1-201ENST00000326195 UBTD1Q9HAC8 227 aa8.59□□□□□ -1.04
ABCF1-201ENST00000326195 RYDENQ9NUL5 291 aaKnown RBP8.59□□□□□ -1.04
ABCF1-201ENST00000326195 PSENENQ9NZ42 101 aa8.59□□□□□ -1.04
ABCF1-201ENST00000326195 MTCH1Q9NZJ7 389 aa8.59□□□□□ -1.04
ABCF1-201ENST00000326195 CHTOPQ9Y3Y2 248 aaKnown RBP8.59□□□□□ -1.04
ABCF1-201ENST00000326195 MPC1Q9Y5U8 109 aa8.59□□□□□ -1.04
ABCF1-201ENST00000326195 IGHV1-18A0A0C4DH31 117 aa8.58□□□□□ -1.04
ABCF1-201ENST00000326195 PAGE4O60829 102 aa8.58□□□□□ -1.04
ABCF1-201ENST00000326195 IFNA1P01562 189 aa8.58□□□□□ -1.04
ABCF1-201ENST00000326195 TMEM42Q69YG0 159 aa8.58□□□□□ -1.04
ABCF1-201ENST00000326195 ZNF808Q8N4W9 903 aaPredicted RBP8.58□□□□□ -1.04
ABCF1-201ENST00000326195 JMJD1CQ15652 2540 aa8.58□□□□□ -1.04
ABCF1-201ENST00000326195 DPRXA6NFQ7 191 aa8.58□□□□□ -1.04
ABCF1-201ENST00000326195 PSG2P11465 335 aa8.58□□□□□ -1.04
ABCF1-201ENST00000326195 F2RP25116 425 aa8.58□□□□□ -1.04
ABCF1-201ENST00000326195 MPV17P39210 176 aa8.58□□□□□ -1.04
ABCF1-201ENST00000326195 GABRA2P47869 451 aa8.58□□□□□ -1.04
ABCF1-201ENST00000326195 LCN2P80188 198 aa8.58□□□□□ -1.04
ABCF1-201ENST00000326195 OCIAD2Q56VL3 154 aa8.58□□□□□ -1.04
ABCF1-201ENST00000326195 ACSM6Q6P461 480 aa8.58□□□□□ -1.04
ABCF1-201ENST00000326195 KCNIP4Q6PIL6 250 aa8.58□□□□□ -1.04
ABCF1-201ENST00000326195 DEFB108BQ8NET1 73 aa8.58□□□□□ -1.04
ABCF1-201ENST00000326195 ZC2HC1AQ96GY0 325 aa8.58□□□□□ -1.04
ABCF1-201ENST00000326195 SAMD10Q9BYL1 202 aa8.58□□□□□ -1.04
ABCF1-201ENST00000326195 CST9LQ9H4G1 147 aa8.58□□□□□ -1.04
ABCF1-201ENST00000326195 SEPSECSQ9HD40 501 aaKnown RBP8.58□□□□□ -1.04
ABCF1-201ENST00000326195 OR2W1Q9Y3N9 320 aa8.58□□□□□ -1.04
ABCF1-201ENST00000326195 TEP1Q99973 2627 aaKnown RBP8.58□□□□□ -1.04
ABCF1-201ENST00000326195 FAM90A10PA6NDY2 464 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 FAM90A18PA6NE21 464 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 FAM90A16PA6NEW6 464 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 FAM90A20PA6NIJ5 464 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 FAM90A8PA6NJQ4 464 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 FAM90A7PA6NKC0 464 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 FAM90A22PA8MWA6 464 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 FAM90A12PA8MX19 464 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 FAM90A5PA8MXJ8 464 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 FAM90A23PA8MXZ1 464 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 CLDN14O95500 239 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 FAM90A15PP0C7V4 464 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 FAM90A13PP0C7W8 464 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 FAM90A14PP0C7W9 464 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 FAM90A24PP0C7X0 464 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 PSG1P11464 419 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 SUMO1P63165 101 aaKnown RBP8.57□□□□□ -1.04
ABCF1-201ENST00000326195 PAFAH1B2P68402 229 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 CCL8P80075 99 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 SVIPQ8NHG7 77 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 NUDT11Q96G61 164 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 OR4C12Q96R67 309 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 UQCR10Q9UDW1 63 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 F6UZH7 168 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 CDIPTO14735 213 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 NAPSAO96009 420 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 TFF1P04155 84 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 CRISP2P16562 243 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 PPP1CBP62140 327 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 SMIM15Q7Z3B0 74 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 OR5P3Q8WZ94 311 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 UHRF2Q96PU4 802 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 LINC00470Q9BZP3 86 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 LIN7CQ9NUP9 197 aaKnown RBP8.57□□□□□ -1.04
ABCF1-201ENST00000326195 LRP5LA4QPB2 252 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 LYNX1G3V0Z9 82 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 MLNRO43193 412 aa8.57□□□□□ -1.04
ABCF1-201ENST00000326195 PGLYRP1O75594 196 aaPredicted RBP8.57□□□□□ -1.04
ABCF1-201ENST00000326195 KRASP01116 189 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms