RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 PCP4P48539 62 aa17.75■□□□□ 0.43
RNF40-201ENST00000324685 ADAMTSL1Q8N6G6 1762 aa17.75■□□□□ 0.43
RNF40-201ENST00000324685 A0A1W2PR77 199 aa17.75■□□□□ 0.43
RNF40-201ENST00000324685 ARPC1AQ92747 370 aa17.75■□□□□ 0.43
RNF40-201ENST00000324685 IGHV3OR16-10A0A075B7F0 116 aa17.75■□□□□ 0.43
RNF40-201ENST00000324685 A0A1B0GWB2 263 aa17.75■□□□□ 0.43
RNF40-201ENST00000324685 A8MXK9 166 aa17.75■□□□□ 0.43
RNF40-201ENST00000324685 IGKV1D-33P01593 117 aa17.75■□□□□ 0.43
RNF40-201ENST00000324685 IGKV1-33P01594 117 aa17.75■□□□□ 0.43
RNF40-201ENST00000324685 FER1L6-AS1Q8NA97 138 aa17.75■□□□□ 0.43
RNF40-201ENST00000324685 ZNFX1Q9P2E3 1918 aaKnown RBP17.74■□□□□ 0.43
RNF40-201ENST00000324685 SHANK3Q9BYB0 1731 aa17.74■□□□□ 0.43
RNF40-201ENST00000324685 A0A0G2JK05 382 aa17.74■□□□□ 0.43
RNF40-201ENST00000324685 IMMP2LQ96T52 175 aa17.74■□□□□ 0.43
RNF40-201ENST00000324685 OR13A1Q8NGR1 328 aa17.74■□□□□ 0.43
RNF40-201ENST00000324685 C14orf144Q96I85 54 aa17.74■□□□□ 0.43
RNF40-201ENST00000324685 DUX3Q96PT4 197 aa17.74■□□□□ 0.43
RNF40-201ENST00000324685 KIAA1217Q5T5P2 1943 aa17.74■□□□□ 0.43
RNF40-201ENST00000324685 CECR9P0C854 216 aa17.74■□□□□ 0.43
RNF40-201ENST00000324685 ATP5G3P48201 142 aa17.74■□□□□ 0.43
RNF40-201ENST00000324685 ORMDL3Q8N138 153 aa17.74■□□□□ 0.43
RNF40-201ENST00000324685 FAM169BQ8N8A8 192 aa17.74■□□□□ 0.43
RNF40-201ENST00000324685 RBMY1BA6NDE4 496 aaKnown RBP17.73■□□□□ 0.43
RNF40-201ENST00000324685 RBMY1EA6NEQ0 496 aaKnown RBP17.73■□□□□ 0.43
RNF40-201ENST00000324685 RBMY1DP0C7P1 496 aaKnown RBP17.73■□□□□ 0.43
RNF40-201ENST00000324685 RBMY1A1P0DJD3 496 aaKnown RBP17.73■□□□□ 0.43
RNF40-201ENST00000324685 RBMY1CP0DJD4 496 aa17.73■□□□□ 0.43
RNF40-201ENST00000324685 PLXNB2O15031 1838 aa17.73■□□□□ 0.43
RNF40-201ENST00000324685 IGHV3OR16-13A0A075B7E8 117 aa17.73■□□□□ 0.43
RNF40-201ENST00000324685 IGHV3-74A0A0B4J1X5 117 aa17.73■□□□□ 0.43
RNF40-201ENST00000324685 NIT1Q86X76 327 aa17.73■□□□□ 0.43
RNF40-201ENST00000324685 OTORQ9NRC9 128 aa17.73■□□□□ 0.43
RNF40-201ENST00000324685 MYO16Q9Y6X6 1858 aa17.73■□□□□ 0.43
RNF40-201ENST00000324685 IGHV3-66A0A0C4DH42 116 aa17.73■□□□□ 0.43
RNF40-201ENST00000324685 GPR183P32249 361 aa17.73■□□□□ 0.43
RNF40-201ENST00000324685 ZNF525Q8N782 197 aa17.73■□□□□ 0.43
RNF40-201ENST00000324685 Q9H3A6 140 aa17.73■□□□□ 0.43
RNF40-201ENST00000324685 CACNG7P62955 275 aa17.73■□□□□ 0.43
RNF40-201ENST00000324685 LINC01560Q8TB33 94 aa17.73■□□□□ 0.43
RNF40-201ENST00000324685 SHISA3A0PJX4 238 aa17.73■□□□□ 0.43
RNF40-201ENST00000324685 ZNF600Q6ZNG1 722 aa17.73■□□□□ 0.43
RNF40-201ENST00000324685 GDF15Q99988 308 aa17.73■□□□□ 0.43
RNF40-201ENST00000324685 ZNF638Q14966 1978 aaKnown RBP17.72■□□□□ 0.43
RNF40-201ENST00000324685 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.72■□□□□ 0.43
RNF40-201ENST00000324685 MIR17HGQ75NE6 70 aa17.72■□□□□ 0.43
RNF40-201ENST00000324685 KIAA0100Q14667 2235 aaKnown RBP17.72■□□□□ 0.43
RNF40-201ENST00000324685 TIAF1O95411 115 aa17.72■□□□□ 0.43
RNF40-201ENST00000324685 RFPL3SP0C7P2 107 aa17.72■□□□□ 0.43
RNF40-201ENST00000324685 LINC00312Q9Y6C7 94 aa17.72■□□□□ 0.43
RNF40-201ENST00000324685 EFEMP2O95967 443 aa17.71■□□□□ 0.43
RNF40-201ENST00000324685 SPCS1Q9Y6A9 102 aa17.71■□□□□ 0.43
RNF40-201ENST00000324685 C18orf12Q96KH6 178 aa17.71■□□□□ 0.43
RNF40-201ENST00000324685 MRPL20Q9BYC9 149 aaKnown RBP17.71■□□□□ 0.43
RNF40-201ENST00000324685 CYB5R2Q6BCY4 276 aa17.71■□□□□ 0.43
RNF40-201ENST00000324685 PROB1E7EW31 1015 aa17.71■□□□□ 0.43
RNF40-201ENST00000324685 RAMP1O60894 148 aa17.71■□□□□ 0.43
RNF40-201ENST00000324685 CNTFRP26992 372 aa17.7■□□□□ 0.42
RNF40-201ENST00000324685 ZNF324BQ6AW86 544 aaPredicted RBP17.7■□□□□ 0.42
RNF40-201ENST00000324685 NUP214P35658 2090 aaPredicted RBP17.7■□□□□ 0.42
RNF40-201ENST00000324685 IGHV2OR16-5A0A0B4J2B6 119 aa17.7■□□□□ 0.42
RNF40-201ENST00000324685 RNF222A6NCQ9 220 aa17.7■□□□□ 0.42
RNF40-201ENST00000324685 IQCF6A8MYZ5 107 aa17.7■□□□□ 0.42
RNF40-201ENST00000324685 ZXDCQ2QGD7 858 aaPredicted RBP17.7■□□□□ 0.42
RNF40-201ENST00000324685 TUBA4BQ9H853 241 aa17.7■□□□□ 0.42
RNF40-201ENST00000324685 COLQQ9Y215 455 aaPredicted RBP17.7■□□□□ 0.42
RNF40-201ENST00000324685 RNASE4P34096 147 aaKnown RBP17.7■□□□□ 0.42
RNF40-201ENST00000324685 FAM216BQ8N7L0 139 aa17.7■□□□□ 0.42
RNF40-201ENST00000324685 SIGLEC12Q96PQ1 595 aa17.7■□□□□ 0.42
RNF40-201ENST00000324685 COL24A1Q17RW2 1714 aa17.7■□□□□ 0.42
RNF40-201ENST00000324685 NINQ8N4C6 2090 aa17.7■□□□□ 0.42
RNF40-201ENST00000324685 IGFBP3P17936 291 aaPredicted RBP17.7■□□□□ 0.42
RNF40-201ENST00000324685 FDCSPQ8NFU4 85 aa17.7■□□□□ 0.42
RNF40-201ENST00000324685 IGKV1D-43A0A0B4J1Z2 117 aa17.69■□□□□ 0.42
RNF40-201ENST00000324685 LINC00114Q6XXX2 140 aa17.69■□□□□ 0.42
RNF40-201ENST00000324685 REPIN1Q9BWE0 567 aaKnown RBP17.69■□□□□ 0.42
RNF40-201ENST00000324685 GSN-AS1Q9NRJ2 163 aa17.69■□□□□ 0.42
RNF40-201ENST00000324685 ADAMTS7Q9UKP4 1686 aa17.69■□□□□ 0.42
RNF40-201ENST00000324685 ITLN2Q8WWU7 325 aaPredicted RBP17.69■□□□□ 0.42
RNF40-201ENST00000324685 PRDM13Q9H4Q3 707 aa17.69■□□□□ 0.42
RNF40-201ENST00000324685 IGHV3-49A0A0A0MS15 119 aa17.69■□□□□ 0.42
RNF40-201ENST00000324685 MRPS18CQ9Y3D5 142 aaKnown RBP17.69■□□□□ 0.42
RNF40-201ENST00000324685 C19orf48Q6RUI8 117 aa17.68■□□□□ 0.42
RNF40-201ENST00000324685 S4R3C0 116 aa17.68■□□□□ 0.42
RNF40-201ENST00000324685 TRAV14DV4A0A0A6YYC5 116 aa17.68■□□□□ 0.42
RNF40-201ENST00000324685 GHRHP01286 108 aa17.68■□□□□ 0.42
RNF40-201ENST00000324685 LEPP41159 167 aa17.68■□□□□ 0.42
RNF40-201ENST00000324685 CFAP161Q6P656 301 aa17.68■□□□□ 0.42
RNF40-201ENST00000324685 NDUFA3O95167 84 aa17.68■□□□□ 0.42
RNF40-201ENST00000324685 RPL23P62829 140 aaKnown RBP17.68■□□□□ 0.42
RNF40-201ENST00000324685 OR10J3Q5JRS4 329 aa17.68■□□□□ 0.42
RNF40-201ENST00000324685 CLEC19AQ6UXS0 136 aa17.68■□□□□ 0.42
RNF40-201ENST00000324685 ST6GALNAC6Q969X2 333 aa17.68■□□□□ 0.42
RNF40-201ENST00000324685 SNAI2O43623 268 aa17.68■□□□□ 0.42
RNF40-201ENST00000324685 TMEM144Q7Z5S9 345 aa17.68■□□□□ 0.42
RNF40-201ENST00000324685 TMEM170AQ8WVE7 144 aa17.68■□□□□ 0.42
RNF40-201ENST00000324685 TRBV7-9A0A0J9YWB2 115 aa17.67■□□□□ 0.42
RNF40-201ENST00000324685 CELA3AP09093 270 aa17.67■□□□□ 0.42
RNF40-201ENST00000324685 FAM27E3Q08E93 113 aa17.67■□□□□ 0.42
RNF40-201ENST00000324685 ASCL2Q99929 193 aa17.67■□□□□ 0.42
RNF40-201ENST00000324685 SLC50A1Q9BRV3 221 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms