RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 A0A0G2JRQ6 117 aa12.82□□□□□ -0.36
VARS2-201ENST00000321897 SLC25A5P05141 298 aaKnown RBP12.82□□□□□ -0.36
VARS2-201ENST00000321897 CSRP1P21291 193 aaKnown RBP12.82□□□□□ -0.36
VARS2-201ENST00000321897 GATA2P23769 480 aaPredicted RBP12.82□□□□□ -0.36
VARS2-201ENST00000321897 RNFT1Q5M7Z0 435 aa12.82□□□□□ -0.36
VARS2-201ENST00000321897 C1orf194Q5T5A4 169 aa12.82□□□□□ -0.36
VARS2-201ENST00000321897 LCN12Q6JVE5 192 aa12.82□□□□□ -0.36
VARS2-201ENST00000321897 BEND2Q8NDZ0 799 aa12.82□□□□□ -0.36
VARS2-201ENST00000321897 RRHO14718 337 aa12.81□□□□□ -0.36
VARS2-201ENST00000321897 PSPNO60542 156 aa12.81□□□□□ -0.36
VARS2-201ENST00000321897 SMPD2O60906 423 aa12.81□□□□□ -0.36
VARS2-201ENST00000321897 ACP1P24666 158 aa12.81□□□□□ -0.36
VARS2-201ENST00000321897 POLR3KQ9Y2Y1 108 aaPredicted RBP12.81□□□□□ -0.36
VARS2-201ENST00000321897 NUDT3O95989 172 aa12.81□□□□□ -0.36
VARS2-201ENST00000321897 REG1AP05451 166 aa12.81□□□□□ -0.36
VARS2-201ENST00000321897 HTR1DP28221 377 aa12.81□□□□□ -0.36
VARS2-201ENST00000321897 Q6ZVH6 145 aa12.81□□□□□ -0.36
VARS2-201ENST00000321897 OR8B2Q96RD0 313 aa12.81□□□□□ -0.36
VARS2-201ENST00000321897 SAP30LQ9HAJ7 183 aa12.81□□□□□ -0.36
VARS2-201ENST00000321897 NRN1Q9NPD7 142 aa12.81□□□□□ -0.36
VARS2-201ENST00000321897 SLC45A2Q9UMX9 530 aa12.81□□□□□ -0.36
VARS2-201ENST00000321897 CXorf1O96002 111 aa12.81□□□□□ -0.36
VARS2-201ENST00000321897 HCP5Q6MZN7 132 aa12.81□□□□□ -0.36
VARS2-201ENST00000321897 NGBQ9NPG2 151 aa12.81□□□□□ -0.36
VARS2-201ENST00000321897 TMEM265A0A087WTH1 108 aa12.8□□□□□ -0.36
VARS2-201ENST00000321897 B3GALT5-AS1P59052 145 aa12.8□□□□□ -0.36
VARS2-201ENST00000321897 RBPJQ06330 500 aa12.8□□□□□ -0.36
VARS2-201ENST00000321897 TMEM108Q6UXF1 575 aa12.8□□□□□ -0.36
VARS2-201ENST00000321897 FA2HQ7L5A8 372 aa12.8□□□□□ -0.36
VARS2-201ENST00000321897 PRSS3P2Q8NHM4 247 aa12.8□□□□□ -0.36
VARS2-201ENST00000321897 HARBI1Q96MB7 349 aa12.8□□□□□ -0.36
VARS2-201ENST00000321897 PSMG3Q9BT73 122 aaPredicted RBP12.8□□□□□ -0.36
VARS2-201ENST00000321897 METRNQ9UJH8 293 aa12.8□□□□□ -0.36
VARS2-201ENST00000321897 CCDC168Q8NDH2 2452 aa12.8□□□□□ -0.36
VARS2-201ENST00000321897 NDUFB3O43676 98 aa12.8□□□□□ -0.36
VARS2-201ENST00000321897 GZMHP20718 246 aa12.8□□□□□ -0.36
VARS2-201ENST00000321897 CTSSP25774 331 aa12.8□□□□□ -0.36
VARS2-201ENST00000321897 GPR6P46095 362 aaPredicted RBP12.8□□□□□ -0.36
VARS2-201ENST00000321897 PRSS8Q16651 343 aa12.8□□□□□ -0.36
VARS2-201ENST00000321897 TLN2Q9Y4G6 2542 aa12.8□□□□□ -0.36
VARS2-201ENST00000321897 PIEZO1Q92508 2521 aa12.8□□□□□ -0.36
VARS2-201ENST00000321897 CA11O75493 328 aa12.8□□□□□ -0.36
VARS2-201ENST00000321897 NPY1RP25929 384 aa12.8□□□□□ -0.36
VARS2-201ENST00000321897 IBA57Q5T440 356 aaKnown RBP12.8□□□□□ -0.36
VARS2-201ENST00000321897 FAM122AQ96E09 287 aa12.8□□□□□ -0.36
VARS2-201ENST00000321897 NPCDR1Q9BY65 106 aa12.8□□□□□ -0.36
VARS2-201ENST00000321897 MYO9AB2RTY4 2548 aa12.79□□□□□ -0.36
VARS2-201ENST00000321897 MYO15AQ9UKN7 3530 aa12.79□□□□□ -0.36
VARS2-201ENST00000321897 RBP4P02753 201 aa12.79□□□□□ -0.36
VARS2-201ENST00000321897 TMEM191AQ9H0A3 160 aa12.79□□□□□ -0.36
VARS2-201ENST00000321897 HES4Q9HCC6 221 aa12.79□□□□□ -0.36
VARS2-201ENST00000321897 WNK1Q9H4A3 2382 aa12.79□□□□□ -0.36
VARS2-201ENST00000321897 PLXNB1O43157 2135 aa12.79□□□□□ -0.36
VARS2-201ENST00000321897 J3QR06 171 aa12.79□□□□□ -0.36
VARS2-201ENST00000321897 IL18BPO95998 194 aa12.79□□□□□ -0.36
VARS2-201ENST00000321897 ARL16Q0P5N6 197 aa12.79□□□□□ -0.36
VARS2-201ENST00000321897 FAM216BQ8N7L0 139 aa12.79□□□□□ -0.36
VARS2-201ENST00000321897 OR8A1Q8NGG7 326 aa12.79□□□□□ -0.36
VARS2-201ENST00000321897 OR8B3Q8NGG8 313 aa12.79□□□□□ -0.36
VARS2-201ENST00000321897 OR4S2Q8NH73 311 aa12.79□□□□□ -0.36
VARS2-201ENST00000321897 BCL2L2Q92843 193 aaPredicted RBP12.79□□□□□ -0.36
VARS2-201ENST00000321897 TMEM140Q9NV12 185 aa12.79□□□□□ -0.36
VARS2-201ENST00000321897 CA1P00915 261 aaPredicted RBP12.79□□□□□ -0.36
VARS2-201ENST00000321897 GFRA1P56159 465 aa12.79□□□□□ -0.36
VARS2-201ENST00000321897 RNASE7Q9H1E1 156 aaKnown RBP12.79□□□□□ -0.36
VARS2-201ENST00000321897 ONECUT1Q9UBC0 465 aa12.79□□□□□ -0.36
VARS2-201ENST00000321897 TNFRSF1AP19438 455 aa12.78□□□□□ -0.36
VARS2-201ENST00000321897 Q6ZRM9 215 aa12.78□□□□□ -0.36
VARS2-201ENST00000321897 CORO2AQ92828 525 aa12.78□□□□□ -0.36
VARS2-201ENST00000321897 MED12LQ86YW9 2145 aa12.78□□□□□ -0.36
VARS2-201ENST00000321897 GAGE10A6NGK3 116 aa12.78□□□□□ -0.36
VARS2-201ENST00000321897 CDKN1AP38936 164 aa12.78□□□□□ -0.36
VARS2-201ENST00000321897 LGALS4P56470 323 aa12.78□□□□□ -0.36
VARS2-201ENST00000321897 LCN2P80188 198 aa12.78□□□□□ -0.36
VARS2-201ENST00000321897 TMEM56Q96MV1 263 aa12.78□□□□□ -0.36
VARS2-201ENST00000321897 TMEM56-RWDD3S4R434 201 aa12.78□□□□□ -0.36
VARS2-201ENST00000321897 TRANK1O15050 2925 aa12.78□□□□□ -0.36
VARS2-201ENST00000321897 CENPWQ5EE01 88 aa12.78□□□□□ -0.36
VARS2-201ENST00000321897 LHFPL4Q7Z7J7 247 aa12.78□□□□□ -0.36
VARS2-201ENST00000321897 FLYWCH2Q96CP2 140 aaKnown RBP12.78□□□□□ -0.36
VARS2-201ENST00000321897 RNF7Q9UBF6 113 aa12.78□□□□□ -0.36
VARS2-201ENST00000321897 TNXAQ16473 311 aa12.78□□□□□ -0.36
VARS2-201ENST00000321897 S100A7AQ86SG5 101 aa12.78□□□□□ -0.36
VARS2-201ENST00000321897 NAA38Q9BRA0 125 aaKnown RBP12.78□□□□□ -0.36
VARS2-201ENST00000321897 NCBP2LA6PVI3 153 aaKnown RBP12.77□□□□□ -0.36
VARS2-201ENST00000321897 RIPPLY3P57055 190 aa12.77□□□□□ -0.36
VARS2-201ENST00000321897 OCC1Q8TAD7 63 aa12.77□□□□□ -0.36
VARS2-201ENST00000321897 ASCL3Q9NQ33 180 aa12.77□□□□□ -0.36
VARS2-201ENST00000321897 CD59P13987 128 aa12.77□□□□□ -0.37
VARS2-201ENST00000321897 TEPPQ6URK8 271 aa12.77□□□□□ -0.37
VARS2-201ENST00000321897 CGAP01215 116 aa12.77□□□□□ -0.37
VARS2-201ENST00000321897 LRRC10Q5BKY1 277 aa12.77□□□□□ -0.37
VARS2-201ENST00000321897 ZNF645Q8N7E2 425 aa12.77□□□□□ -0.37
VARS2-201ENST00000321897 GNB4Q9HAV0 340 aa12.77□□□□□ -0.37
VARS2-201ENST00000321897 TMSB15BA0A087X1C1 80 aa12.76□□□□□ -0.37
VARS2-201ENST00000321897 PPOXP50336 477 aa12.76□□□□□ -0.37
VARS2-201ENST00000321897 ACSF3Q4G176 576 aaPredicted RBP12.76□□□□□ -0.37
VARS2-201ENST00000321897 Q6ZT83 130 aa12.76□□□□□ -0.37
VARS2-201ENST00000321897 OR1L4Q8NGR5 311 aa12.76□□□□□ -0.37
VARS2-201ENST00000321897 OR1B1Q8NGR6 318 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms