RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 HLA-DMAP28067 261 aa10.7□□□□□ -0.7
RPP40-201ENST00000319533 HRH1P35367 487 aa10.7□□□□□ -0.7
RPP40-201ENST00000319533 RFX2P48378 723 aa10.7□□□□□ -0.7
RPP40-201ENST00000319533 AADACL3Q5VUY0 350 aa10.7□□□□□ -0.7
RPP40-201ENST00000319533 DHRS11Q6UWP2 260 aa10.7□□□□□ -0.7
RPP40-201ENST00000319533 ZNF818PQ6ZRF7 136 aa10.7□□□□□ -0.7
RPP40-201ENST00000319533 SPAG16Q8N0X2 631 aa10.7□□□□□ -0.7
RPP40-201ENST00000319533 GDPD1Q8N9F7 314 aa10.7□□□□□ -0.7
RPP40-201ENST00000319533 OR6F1Q8NGZ6 308 aa10.7□□□□□ -0.7
RPP40-201ENST00000319533 C15orf40Q8WUR7 153 aa10.7□□□□□ -0.7
RPP40-201ENST00000319533 MOB3AQ96BX8 217 aa10.7□□□□□ -0.7
RPP40-201ENST00000319533 GPHA2Q96T91 129 aa10.7□□□□□ -0.7
RPP40-201ENST00000319533 AIFM2Q9BRQ8 373 aa10.7□□□□□ -0.7
RPP40-201ENST00000319533 PGPEP1Q9NXJ5 209 aa10.7□□□□□ -0.7
RPP40-201ENST00000319533 OR11H12B2RN74 326 aa10.69□□□□□ -0.7
RPP40-201ENST00000319533 CTDSPLO15194 276 aa10.69□□□□□ -0.7
RPP40-201ENST00000319533 RBFOX2O43251 390 aaKnown RBP eCLIP10.69□□□□□ -0.73e-7■■■■■ 56.6
RPP40-201ENST00000319533 GSTZ1O43708 216 aaPredicted RBP10.69□□□□□ -0.7
RPP40-201ENST00000319533 UPK1BO75841 260 aa10.69□□□□□ -0.7
RPP40-201ENST00000319533 FOLR2P14207 255 aa10.69□□□□□ -0.7
RPP40-201ENST00000319533 TSPAN5P62079 268 aa10.69□□□□□ -0.7
RPP40-201ENST00000319533 KLK9Q2XQG4 91 aa10.69□□□□□ -0.7
RPP40-201ENST00000319533 SLC25A42Q86VD7 318 aa10.69□□□□□ -0.7
RPP40-201ENST00000319533 CMTM1Q8IZ96 169 aa10.69□□□□□ -0.7
RPP40-201ENST00000319533 OR52I2Q8NH67 350 aa10.69□□□□□ -0.7
RPP40-201ENST00000319533 CD300LFQ8TDQ1 290 aa10.69□□□□□ -0.7
RPP40-201ENST00000319533 SMIM4Q8WVI0 70 aa10.69□□□□□ -0.7
RPP40-201ENST00000319533 OR2A7Q96R45 310 aa10.69□□□□□ -0.7
RPP40-201ENST00000319533 CCDC32Q9BV29 185 aa10.69□□□□□ -0.7
RPP40-201ENST00000319533 WFDC10AQ9H1F0 79 aa10.69□□□□□ -0.7
RPP40-201ENST00000319533 SRD5A3Q9H8P0 318 aa10.69□□□□□ -0.7
RPP40-201ENST00000319533 KLK9Q9UKQ9 250 aa10.69□□□□□ -0.7
RPP40-201ENST00000319533 TEX22C9J3V5 150 aa10.68□□□□□ -0.7
RPP40-201ENST00000319533 GGCTO75223 188 aaKnown RBP10.68□□□□□ -0.7
RPP40-201ENST00000319533 KBTBD11O94819 623 aa10.68□□□□□ -0.7
RPP40-201ENST00000319533 S100GP29377 79 aa10.68□□□□□ -0.7
RPP40-201ENST00000319533 C15orf32Q32M92 178 aa10.68□□□□□ -0.7
RPP40-201ENST00000319533 C10orf55Q5SWW7 151 aa10.68□□□□□ -0.7
RPP40-201ENST00000319533 GPHB5Q86YW7 130 aa10.68□□□□□ -0.7
RPP40-201ENST00000319533 LYSMD2Q8IV50 215 aa10.68□□□□□ -0.7
RPP40-201ENST00000319533 VKORC1L1Q8N0U8 176 aa10.68□□□□□ -0.7
RPP40-201ENST00000319533 OR51H1Q8NH63 302 aa10.68□□□□□ -0.7
RPP40-201ENST00000319533 DYNLRB2Q8TF09 96 aa10.68□□□□□ -0.7
RPP40-201ENST00000319533 ZNF257Q9Y2Q1 563 aa10.68□□□□□ -0.7
RPP40-201ENST00000319533 NPIPB5A8MRT5 1133 aa10.67□□□□□ -0.7
RPP40-201ENST00000319533 PPP5D1E7EU14 171 aa10.67□□□□□ -0.7
RPP40-201ENST00000319533 GABARAPH6UMI1 98 aa10.67□□□□□ -0.7
RPP40-201ENST00000319533 OR2J3O76001 311 aa10.67□□□□□ -0.7
RPP40-201ENST00000319533 HPRT1P00492 218 aa10.67□□□□□ -0.7
RPP40-201ENST00000319533 EDN2P20800 178 aa10.67□□□□□ -0.7
RPP40-201ENST00000319533 GNRHRP30968 328 aa10.67□□□□□ -0.7
RPP40-201ENST00000319533 MAS1LP35410 378 aa10.67□□□□□ -0.7
RPP40-201ENST00000319533 BRWD1-AS2P59051 145 aa10.67□□□□□ -0.7
RPP40-201ENST00000319533 TAS2R31P59538 309 aa10.67□□□□□ -0.7
RPP40-201ENST00000319533 LPCAT3Q6P1A2 487 aa10.67□□□□□ -0.7
RPP40-201ENST00000319533 SSX9Q7RTT3 188 aa10.67□□□□□ -0.7
RPP40-201ENST00000319533 PUSL1Q8N0Z8 303 aaKnown RBP10.67□□□□□ -0.7
RPP40-201ENST00000319533 OR4A5Q8NH83 315 aa10.67□□□□□ -0.7
RPP40-201ENST00000319533 TMEM167AQ8TBQ9 72 aa10.67□□□□□ -0.7
RPP40-201ENST00000319533 TBC1D24Q9ULP9 559 aa10.67□□□□□ -0.7
RPP40-201ENST00000319533 FRAS1Q86XX4 4008 aa10.66□□□□□ -0.7
RPP40-201ENST00000319533 GPR31O00270 319 aa10.66□□□□□ -0.7
RPP40-201ENST00000319533 OR2C1O95371 312 aa10.66□□□□□ -0.7
RPP40-201ENST00000319533 HLA-AP01891 365 aaKnown RBP10.66□□□□□ -0.7
RPP40-201ENST00000319533 RLN1P04808 185 aa10.66□□□□□ -0.7
RPP40-201ENST00000319533 CRYGCP07315 174 aa10.66□□□□□ -0.7
RPP40-201ENST00000319533 IL6RP08887 468 aaPredicted RBP10.66□□□□□ -0.7
RPP40-201ENST00000319533 NQO2P16083 231 aa10.66□□□□□ -0.7
RPP40-201ENST00000319533 CBLN1P23435 193 aa10.66□□□□□ -0.7
RPP40-201ENST00000319533 RPL27AP46776 148 aaKnown RBP10.66□□□□□ -0.7
RPP40-201ENST00000319533 GUCA2BQ16661 112 aa10.66□□□□□ -0.7
RPP40-201ENST00000319533 WDR89Q96FK6 387 aaPredicted RBP10.66□□□□□ -0.7
RPP40-201ENST00000319533 FANCD2OSQ96PS1 177 aa10.66□□□□□ -0.7
RPP40-201ENST00000319533 FXYD6Q9H0Q3 95 aa10.66□□□□□ -0.7
RPP40-201ENST00000319533 PLEKHA2Q9HB19 425 aa10.66□□□□□ -0.7
RPP40-201ENST00000319533 HRASLSQ9HDD0 168 aa10.66□□□□□ -0.7
RPP40-201ENST00000319533 SLC2A9Q9NRM0 540 aa10.66□□□□□ -0.7
RPP40-201ENST00000319533 BET1LQ9NYM9 111 aa10.66□□□□□ -0.7
RPP40-201ENST00000319533 RABL2AQ9UBK7 228 aaPredicted RBP10.66□□□□□ -0.7
RPP40-201ENST00000319533 KLK11Q9UBX7 282 aa10.66□□□□□ -0.7
RPP40-201ENST00000319533 FBXL7Q9UJT9 491 aa10.66□□□□□ -0.7
RPP40-201ENST00000319533 RABL2BQ9UNT1 228 aa10.66□□□□□ -0.7
RPP40-201ENST00000319533 A0A1B0GW64 132 aa10.65□□□□□ -0.7
RPP40-201ENST00000319533 HMX3A6NHT5 357 aa10.65□□□□□ -0.7
RPP40-201ENST00000319533 A8MWP6 167 aa10.65□□□□□ -0.7
RPP40-201ENST00000319533 E7EUB6 86 aa10.65□□□□□ -0.7
RPP40-201ENST00000319533 PGLYRP1O75594 196 aaPredicted RBP10.65□□□□□ -0.7
RPP40-201ENST00000319533 ZNF735P0CB33 412 aa10.65□□□□□ -0.7
RPP40-201ENST00000319533 HLA-GP17693 338 aa10.65□□□□□ -0.7
RPP40-201ENST00000319533 ERVK-16P61578 105 aa10.65□□□□□ -0.7
RPP40-201ENST00000319533 RPL8P62917 257 aaKnown RBP10.65□□□□□ -0.7
RPP40-201ENST00000319533 RNASE10Q5GAN6 216 aaKnown RBP10.65□□□□□ -0.7
RPP40-201ENST00000319533 SLC16A13Q7RTY0 426 aa10.65□□□□□ -0.7
RPP40-201ENST00000319533 SLC38A6Q8IZM9 456 aa10.65□□□□□ -0.7
RPP40-201ENST00000319533 DMBX1Q8NFW5 382 aa10.65□□□□□ -0.7
RPP40-201ENST00000319533 FCAMRQ8WWV6 532 aa10.65□□□□□ -0.7
RPP40-201ENST00000319533 CCDC140Q96MF4 163 aa10.65□□□□□ -0.7
RPP40-201ENST00000319533 FYTTD1Q96QD9 318 aaKnown RBP10.65□□□□□ -0.7
RPP40-201ENST00000319533 OVOL2Q9BRP0 275 aa10.65□□□□□ -0.7
RPP40-201ENST00000319533 COMMD9Q9P000 198 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms