RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 WDR86Q86TI4 376 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 BPIFA4PQ86YQ2 179 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 BPESC1Q9GZL8 116 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 GNG13Q9P2W3 67 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 FREM1Q5H8C1 2179 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 KBTBD11O94819 623 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 CCKARP32238 428 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 H2BFSP57053 126 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 POLR2GP62487 172 aaKnown RBP eCLIP7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 COQ2Q96H96 371 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 SMDT1Q9H4I9 107 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 FOXA2Q9Y261 457 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 CPAMD8Q8IZJ3 1885 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 IGSF23A1L1A6 192 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 SHISA9B4DS77 424 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 ZNF137PP52743 207 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 MYPOPQ86VE0 399 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 LINC00311Q8N616 119 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 OR52E5Q8NH55 327 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 GPR146Q96CH1 333 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 BOLA1Q9Y3E2 137 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 CACNA1DQ01668 2161 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 MARCH11A6NNE9 402 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 ZNF660Q6AZW8 331 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 TMED6Q8WW62 240 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 C18orf12Q96KH6 178 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 ROS1P08922 2347 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 CADP27708 2225 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 IGKV1D-8A0A087WSZ0 117 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 SAP30O75446 220 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 DUSP14O95147 198 aaKnown RBP7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 LHBP01229 141 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 APELAP0DMC3 54 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 ADORA2A-AS1P86434 159 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 PRR27Q6MZM9 219 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 TEX38Q6PEX7 206 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 RNF144BQ7Z419 303 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 ZNF525Q8N782 197 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 OR4B1Q8NGF8 309 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 TMEM140Q9NV12 185 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 TLN1Q9Y490 2541 aaKnown RBP7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 SNURFLB1AK76 121 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 H3BP45 60 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 RAB5AP20339 215 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 EWSR1Q01844 656 aaKnown RBP eCLIP7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 ZNF90Q03938 601 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 FOXL1Q12952 345 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 DTX2Q86UW9 622 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 TMEM252Q8N6L7 170 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 DPH3Q96FX2 82 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 NPVFQ9HCQ7 196 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 BIVMQ86UB2 503 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 C11orf53Q8IXP5 236 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 OR5C1Q8NGR4 320 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 SUN5Q8TC36 379 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 ITLN2Q8WWU7 325 aaPredicted RBP7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 MANBALQ9NQG1 85 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 MED12LQ86YW9 2145 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 ICE1Q9Y2F5 2266 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 NPIPB6E9PJ23 425 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 EGR1P18146 543 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 TMEM18Q96B42 140 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 TP53RKQ96S44 253 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 APOC3P02656 99 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 UQCRFS1P47985 274 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 C1orf122Q6ZSJ8 110 aa7.07□□□□□ -1.28
PDLIM5-201ENST00000317968 CST7O76096 145 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 GNG4P50150 75 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 TNFRSF9Q07011 255 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 OR10G4Q8NGN3 311 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 OR10G9Q8NGN4 311 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 OR10G7Q8NGN6 311 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 PLSCR3Q9NRY6 295 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 FAM24AA6NFZ4 105 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 ID3Q02535 119 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 C1orf196B1AJZ1 125 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 DUTP33316 252 aaKnown RBP7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 LEMD1Q68G75 181 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 LRRC75A-AS1Q8N1F1 130 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 OR10C1Q96KK4 312 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 TRAV41A0A0B4J266 112 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 C2orf68Q2NKX9 166 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 TMEM41BQ5BJD5 291 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 HCP5Q6MZN7 132 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 KIR3DL3Q8N743 410 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 TEX45Q8NA69 505 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 C19orf24Q9BVV8 132 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 IGF2RP11717 2491 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 LYNX1G3V0Z9 82 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 OR2J3O76001 311 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 LYNX1P0DP58 116 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 LDLRAD3Q86YD5 345 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 ZMAT4Q9H898 229 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 ZNF257Q9Y2Q1 563 aa7.06□□□□□ -1.28
PDLIM5-201ENST00000317968 IGKV1D-13A0A0B4J2D9 117 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 IGKV1-13P0DP09 117 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 SSTP61278 116 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 TMEM190Q8WZ59 177 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 C21orf62Q9NYP8 219 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms