RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 AMTP48728 403 aa8.72□□□□□ -1.01
COL3A1-202ENST00000317840 RBPJQ06330 500 aa8.72□□□□□ -1.01
COL3A1-202ENST00000317840 TRAT1Q6PIZ9 186 aa8.72□□□□□ -1.01
COL3A1-202ENST00000317840 DOLPP1Q86YN1 238 aa8.72□□□□□ -1.01
COL3A1-202ENST00000317840 OR2V2Q96R30 315 aa8.72□□□□□ -1.01
COL3A1-202ENST00000317840 GGTLC1Q9BX51 225 aa8.72□□□□□ -1.01
COL3A1-202ENST00000317840 ACACBO00763 2458 aa8.72□□□□□ -1.01
COL3A1-202ENST00000317840 YLPM1P49750 1951 aaKnown RBP8.72□□□□□ -1.01
COL3A1-202ENST00000317840 MGST3O14880 152 aa8.72□□□□□ -1.01
COL3A1-202ENST00000317840 GATA2P23769 480 aaPredicted RBP8.72□□□□□ -1.01
COL3A1-202ENST00000317840 CRYBB3P26998 211 aa8.72□□□□□ -1.01
COL3A1-202ENST00000317840 SUMO1P63165 101 aaKnown RBP8.72□□□□□ -1.01
COL3A1-202ENST00000317840 RPEL1Q2QD12 228 aa8.72□□□□□ -1.01
COL3A1-202ENST00000317840 TEX38Q6PEX7 206 aa8.72□□□□□ -1.01
COL3A1-202ENST00000317840 CENPVQ7Z7K6 275 aaPredicted RBP8.72□□□□□ -1.01
COL3A1-202ENST00000317840 RPRMLQ8N4K4 120 aa8.72□□□□□ -1.01
COL3A1-202ENST00000317840 FAM122AQ96E09 287 aa8.72□□□□□ -1.01
COL3A1-202ENST00000317840 MGST2Q99735 147 aa8.72□□□□□ -1.01
COL3A1-202ENST00000317840 ZNF586Q9NXT0 402 aa8.72□□□□□ -1.01
COL3A1-202ENST00000317840 PMS2P5A8MQ11 134 aa8.72□□□□□ -1.01
COL3A1-202ENST00000317840 SELLP14151 372 aa8.72□□□□□ -1.01
COL3A1-202ENST00000317840 OPRK1P41145 380 aa8.72□□□□□ -1.01
COL3A1-202ENST00000317840 CD177Q8N6Q3 437 aa8.72□□□□□ -1.01
COL3A1-202ENST00000317840 RPH3ALQ9UNE2 315 aa8.72□□□□□ -1.01
COL3A1-202ENST00000317840 IGFBP2P18065 325 aa8.71□□□□□ -1.01
COL3A1-202ENST00000317840 BRWD1-AS2P59051 145 aa8.71□□□□□ -1.01
COL3A1-202ENST00000317840 TCF15Q12870 199 aa8.71□□□□□ -1.01
COL3A1-202ENST00000317840 MORN2Q502X0 79 aa8.71□□□□□ -1.01
COL3A1-202ENST00000317840 DNLZQ5SXM8 178 aa8.71□□□□□ -1.01
COL3A1-202ENST00000317840 PRR27Q6MZM9 219 aa8.71□□□□□ -1.01
COL3A1-202ENST00000317840 PQLC2Q6ZP29 291 aa8.71□□□□□ -1.01
COL3A1-202ENST00000317840 MMD2Q8IY49 270 aa8.71□□□□□ -1.01
COL3A1-202ENST00000317840 PRSS33Q8NF86 280 aa8.71□□□□□ -1.01
COL3A1-202ENST00000317840 RND1Q92730 232 aa8.71□□□□□ -1.01
COL3A1-202ENST00000317840 TRGV10A0A0A0MS01 117 aa8.71□□□□□ -1.02
COL3A1-202ENST00000317840 SERF1AO75920 110 aa8.71□□□□□ -1.02
COL3A1-202ENST00000317840 CA2P00918 260 aa8.71□□□□□ -1.02
COL3A1-202ENST00000317840 TNFSF4P23510 183 aa8.71□□□□□ -1.02
COL3A1-202ENST00000317840 RANP62826 216 aaKnown RBP8.71□□□□□ -1.02
COL3A1-202ENST00000317840 CCL8P80075 99 aa8.71□□□□□ -1.02
COL3A1-202ENST00000317840 CORO2AQ92828 525 aa8.71□□□□□ -1.02
COL3A1-202ENST00000317840 ASCL3Q9NQ33 180 aa8.71□□□□□ -1.02
COL3A1-202ENST00000317840 ELOVL5Q9NYP7 299 aa8.71□□□□□ -1.02
COL3A1-202ENST00000317840 CALYQ9NYX4 217 aa8.71□□□□□ -1.02
COL3A1-202ENST00000317840 J3QR06 171 aa8.71□□□□□ -1.02
COL3A1-202ENST00000317840 ZNF253O75346 499 aa8.71□□□□□ -1.02
COL3A1-202ENST00000317840 STAG3L2P0CL84 134 aa8.71□□□□□ -1.02
COL3A1-202ENST00000317840 STAG3L3P0CL85 134 aa8.71□□□□□ -1.02
COL3A1-202ENST00000317840 MYOD1P15172 320 aa8.71□□□□□ -1.02
COL3A1-202ENST00000317840 TIMP3P35625 211 aa8.71□□□□□ -1.02
COL3A1-202ENST00000317840 ZCCHC24Q8N2G6 241 aaKnown RBP8.71□□□□□ -1.02
COL3A1-202ENST00000317840 JPT1Q9UK76 154 aa8.71□□□□□ -1.02
COL3A1-202ENST00000317840 K7EM74 188 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 FOXH1O75593 365 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 WNT2P09544 360 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 EFNB3Q15768 340 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 TMEM183BQ1AE95 376 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 NHLRC2Q8NBF2 726 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 CCL17Q92583 94 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 TXN2Q99757 166 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 C2orf88Q9BSF0 95 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 RAB9BQ9NP90 201 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 SLC45A2Q9UMX9 530 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 YTHDF2Q9Y5A9 579 aaKnown RBP8.7□□□□□ -1.02
COL3A1-202ENST00000317840 TIMM8BQ9Y5J9 83 aaPredicted RBP8.7□□□□□ -1.02
COL3A1-202ENST00000317840 CD99P14209 185 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 HSPE1P61604 102 aaKnown RBP8.7□□□□□ -1.02
COL3A1-202ENST00000317840 FOXL1Q12952 345 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 COA6Q5JTJ3 125 aaKnown RBP8.7□□□□□ -1.02
COL3A1-202ENST00000317840 MIR17HGQ75NE6 70 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 ZCCHC14Q8WYQ9 949 aaKnown RBP8.7□□□□□ -1.02
COL3A1-202ENST00000317840 TXNDC17Q9BRA2 123 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 COMMD5Q9GZQ3 224 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 MGAQ8IWI9 3026 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 TRAV34A0A0B4J273 112 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 NUPR1O60356 82 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 RAB7AP51149 207 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 TAS2R45P59539 299 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 CENPWQ5EE01 88 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 ZNF331Q9NQX6 463 aaPredicted RBP8.7□□□□□ -1.02
COL3A1-202ENST00000317840 OR51B2Q9Y5P1 312 aa8.7□□□□□ -1.02
COL3A1-202ENST00000317840 TRBV20OR9-2A0A075B6H5 130 aa8.69□□□□□ -1.02
COL3A1-202ENST00000317840 HLA-DRB5Q30154 266 aa8.69□□□□□ -1.02
COL3A1-202ENST00000317840 OR4A47Q6IF82 309 aa8.69□□□□□ -1.02
COL3A1-202ENST00000317840 C11orf53Q8IXP5 236 aa8.69□□□□□ -1.02
COL3A1-202ENST00000317840 ITLN1Q8WWA0 313 aa8.69□□□□□ -1.02
COL3A1-202ENST00000317840 SPRY4Q9C004 299 aa8.69□□□□□ -1.02
COL3A1-202ENST00000317840 AHRRA9YTQ3 701 aa8.69□□□□□ -1.02
COL3A1-202ENST00000317840 IGHV3-48P01763 117 aa8.69□□□□□ -1.02
COL3A1-202ENST00000317840 TYMSP04818 313 aa8.69□□□□□ -1.02
COL3A1-202ENST00000317840 KLF3P57682 345 aaPredicted RBP8.69□□□□□ -1.02
COL3A1-202ENST00000317840 ZNF124Q15973 351 aa8.69□□□□□ -1.02
COL3A1-202ENST00000317840 RTL8BQ17RB0 113 aa8.69□□□□□ -1.02
COL3A1-202ENST00000317840 WDR31Q8NA23 367 aa8.69□□□□□ -1.02
COL3A1-202ENST00000317840 RNASE7Q9H1E1 156 aaKnown RBP8.69□□□□□ -1.02
COL3A1-202ENST00000317840 SLC35D1Q9NTN3 355 aa8.69□□□□□ -1.02
COL3A1-202ENST00000317840 TMEM106BQ9NUM4 274 aa8.69□□□□□ -1.02
COL3A1-202ENST00000317840 IL36BQ9NZH7 164 aa8.69□□□□□ -1.02
COL3A1-202ENST00000317840 IL19Q9UHD0 177 aa8.69□□□□□ -1.02
COL3A1-202ENST00000317840 HCFC1P51610 2035 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms