RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 MZT1Q08AG7 82 aa10.8□□□□□ -0.68
CPNE1-201ENST00000317677 FOXL1Q12952 345 aa10.8□□□□□ -0.68
CPNE1-201ENST00000317677 OCIAD2Q56VL3 154 aa10.8□□□□□ -0.68
CPNE1-201ENST00000317677 TMEM41BQ5BJD5 291 aa10.8□□□□□ -0.68
CPNE1-201ENST00000317677 SLC35E4Q6ICL7 350 aa10.8□□□□□ -0.68
CPNE1-201ENST00000317677 TPRX1Q8N7U7 411 aa10.8□□□□□ -0.68
CPNE1-201ENST00000317677 TNFRSF14Q92956 283 aa10.8□□□□□ -0.68
CPNE1-201ENST00000317677 SPIN2AQ99865 258 aa10.8□□□□□ -0.68
CPNE1-201ENST00000317677 SPIN2BQ9BPZ2 258 aa10.8□□□□□ -0.68
CPNE1-201ENST00000317677 PSMG3Q9BT73 122 aaPredicted RBP10.8□□□□□ -0.68
CPNE1-201ENST00000317677 BET1LQ9NYM9 111 aa10.8□□□□□ -0.68
CPNE1-201ENST00000317677 MRPL27Q9P0M9 148 aaKnown RBP10.8□□□□□ -0.68
CPNE1-201ENST00000317677 USP9YO00507 2555 aaPredicted RBP10.8□□□□□ -0.68
CPNE1-201ENST00000317677 TMEM30CPA0ZSE6 113 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 C12orf77C9JDV5 145 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 IGLC2P0DOY2 106 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 IGLC3P0DOY3 106 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 PRDX2P32119 198 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 BMI1P35226 326 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 CST9LP1Q5W188 147 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 C16orf54Q6UWD8 224 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 TBC1D26Q86UD7 250 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 OR1L1Q8NH94 360 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 NEUROG1Q92886 237 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 DCTN5Q9BTE1 182 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 GCM1Q9NP62 436 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 RPRMQ9NS64 109 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 OR2W1Q9Y3N9 320 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 DYSFO75923 2080 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 C3orf85A0A1B0GTC6 90 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 NKX2-6A6NCS4 301 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 FAM90A27PA6NNH2 459 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 CEBPZOSA8MTT3 80 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 SHISA9B4DS77 424 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 CCL21O00585 134 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 PHF1O43189 567 aaPredicted RBP10.79□□□□□ -0.68
CPNE1-201ENST00000317677 SERF2P84101 59 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 RUNX1Q01196 453 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 ID3Q02535 119 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 ZCCHC24Q8N2G6 241 aaKnown RBP10.79□□□□□ -0.68
CPNE1-201ENST00000317677 CCDC71LQ8N9Z2 235 aa10.79□□□□□ -0.68
CPNE1-201ENST00000317677 RPUSD4Q96CM3 377 aaKnown RBP10.79□□□□□ -0.68
CPNE1-201ENST00000317677 ERRFI1Q9UJM3 462 aaPredicted RBP10.79□□□□□ -0.68
CPNE1-201ENST00000317677 RNF212BA8MTL3 300 aa10.78□□□□□ -0.68
CPNE1-201ENST00000317677 IL3RAP26951 378 aa10.78□□□□□ -0.68
CPNE1-201ENST00000317677 TNFAIP6P98066 277 aaPredicted RBP10.78□□□□□ -0.68
CPNE1-201ENST00000317677 LHFPL4Q7Z7J7 247 aa10.78□□□□□ -0.68
CPNE1-201ENST00000317677 PNKDQ8N490 385 aa10.78□□□□□ -0.68
CPNE1-201ENST00000317677 OR5AU1Q8NGC0 362 aa10.78□□□□□ -0.68
CPNE1-201ENST00000317677 OR13A1Q8NGR1 328 aa10.78□□□□□ -0.68
CPNE1-201ENST00000317677 OR5B3Q8NH48 314 aa10.78□□□□□ -0.68
CPNE1-201ENST00000317677 VN1R17PQ8TDU5 208 aa10.78□□□□□ -0.68
CPNE1-201ENST00000317677 GPR146Q96CH1 333 aa10.78□□□□□ -0.68
CPNE1-201ENST00000317677 CST9LQ9H4G1 147 aa10.78□□□□□ -0.68
CPNE1-201ENST00000317677 IL19Q9UHD0 177 aa10.78□□□□□ -0.68
CPNE1-201ENST00000317677 ROS1P08922 2347 aa10.78□□□□□ -0.68
CPNE1-201ENST00000317677 TNFSF12O43508 249 aa10.77□□□□□ -0.68
CPNE1-201ENST00000317677 HYPMO75409 117 aa10.77□□□□□ -0.68
CPNE1-201ENST00000317677 IFNA5P01569 189 aa10.77□□□□□ -0.68
CPNE1-201ENST00000317677 TNFSF4P23510 183 aa10.77□□□□□ -0.68
CPNE1-201ENST00000317677 OMGP23515 440 aa10.77□□□□□ -0.68
CPNE1-201ENST00000317677 SUMO1P63165 101 aaKnown RBP10.77□□□□□ -0.68
CPNE1-201ENST00000317677 MEF2BQ02080 365 aaPredicted RBP10.77□□□□□ -0.68
CPNE1-201ENST00000317677 ZNF726P1Q15940 193 aa10.77□□□□□ -0.68
CPNE1-201ENST00000317677 FBXL19-AS1Q494R0 122 aa10.77□□□□□ -0.68
CPNE1-201ENST00000317677 DUX4L9Q6RFH8 374 aaPredicted RBP10.77□□□□□ -0.68
CPNE1-201ENST00000317677 KLHDC1Q8N7A1 406 aa10.77□□□□□ -0.68
CPNE1-201ENST00000317677 OR10V1Q8NGI7 309 aa10.77□□□□□ -0.68
CPNE1-201ENST00000317677 FAM222BQ8WU58 562 aa10.77□□□□□ -0.68
CPNE1-201ENST00000317677 TMEM56Q96MV1 263 aa10.77□□□□□ -0.68
CPNE1-201ENST00000317677 HSPB9Q9BQS6 159 aa10.77□□□□□ -0.68
CPNE1-201ENST00000317677 TMEM56-RWDD3S4R434 201 aa10.77□□□□□ -0.68
CPNE1-201ENST00000317677 DSCAML1Q8TD84 2053 aa10.77□□□□□ -0.69
CPNE1-201ENST00000317677 E7EQL1 145 aa10.77□□□□□ -0.69
CPNE1-201ENST00000317677 PGLYRP1O75594 196 aaPredicted RBP10.77□□□□□ -0.69
CPNE1-201ENST00000317677 GABRA2P47869 451 aa10.77□□□□□ -0.69
CPNE1-201ENST00000317677 HNRNPA3P51991 378 aaKnown RBP10.77□□□□□ -0.69
CPNE1-201ENST00000317677 SRSF1Q07955 248 aaKnown RBP eCLIP10.77□□□□□ -0.693e-6■□□□□ 9.1
CPNE1-201ENST00000317677 MSMO1Q15800 293 aa10.77□□□□□ -0.69
CPNE1-201ENST00000317677 MEX3BQ6ZN04 569 aaKnown RBP10.77□□□□□ -0.69
CPNE1-201ENST00000317677 FAM90A1Q86YD7 464 aa10.77□□□□□ -0.69
CPNE1-201ENST00000317677 Q8N976 141 aa10.77□□□□□ -0.69
CPNE1-201ENST00000317677 LINC01560Q8TB33 94 aa10.77□□□□□ -0.69
CPNE1-201ENST00000317677 PINX1Q96BK5 328 aaKnown RBP10.77□□□□□ -0.69
CPNE1-201ENST00000317677 C5orf30Q96GV9 206 aa10.77□□□□□ -0.69
CPNE1-201ENST00000317677 TMEM222Q9H0R3 208 aa10.77□□□□□ -0.69
CPNE1-201ENST00000317677 PPIAL4AQ9Y536 164 aa10.77□□□□□ -0.69
CPNE1-201ENST00000317677 ARID1AO14497 2285 aa10.77□□□□□ -0.69
CPNE1-201ENST00000317677 HBZP02008 142 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 CDKN1AP38936 164 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 SELENOVP59797 346 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 Q0VG73 95 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 SELENOHQ8IZQ5 122 aaKnown RBP10.76□□□□□ -0.69
CPNE1-201ENST00000317677 ZNRF1Q8ND25 227 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 OR52L2PQ8NGH6 319 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 Q8TCH9 128 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 PLPPR2Q96GM1 343 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 SLC35D1Q9NTN3 355 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 RNF7Q9UBF6 113 aa10.76□□□□□ -0.69
CPNE1-201ENST00000317677 TP53TG3Q9ULZ0 132 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms