RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 Q6AWC8 147 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 CLEC19AQ6UXS0 136 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 WBP1LQ9NX94 342 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 TMEFF2Q9UIK5 374 aaPredicted RBP11.29□□□□□ -0.6
AFF3-201ENST00000317233 RCC1P18754 421 aaPredicted RBP11.29□□□□□ -0.6
AFF3-201ENST00000317233 IL11P20809 199 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 TMEM258P61165 79 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 PRSS22Q9GZN4 317 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 IGHV1OR15-9A0A0B4J2B8 117 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 CLPSP04118 112 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 HSPB1P04792 205 aaKnown RBP11.29□□□□□ -0.6
AFF3-201ENST00000317233 KLK2P20151 261 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 STPG1Q5TH74 334 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 C5orf30Q96GV9 206 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 CITED1Q99966 193 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 FOXA2Q9Y261 457 aaPredicted RBP11.29□□□□□ -0.6
AFF3-201ENST00000317233 LEPROTO15243 131 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 GCM2O75603 506 aaPredicted RBP11.29□□□□□ -0.6
AFF3-201ENST00000317233 OR2H2O95918 312 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 CCL3P10147 92 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 C6orf226Q5I0X4 101 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 NR2C2APQ86WQ0 139 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 SLC25A28Q96A46 364 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 GPR146Q96CH1 333 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 ABHD17AQ96GS6 310 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 FBXL7Q9UJT9 491 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 UNC119Q13432 240 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 FOCADQ5VW36 1801 aa11.29□□□□□ -0.6
AFF3-201ENST00000317233 A0A1B0GW15 77 aa11.28□□□□□ -0.6
AFF3-201ENST00000317233 ZNF600Q6ZNG1 722 aa11.28□□□□□ -0.6
AFF3-201ENST00000317233 IGHV3-64A0A075B6Q5 118 aa11.28□□□□□ -0.6
AFF3-201ENST00000317233 TRAV41A0A0B4J266 112 aa11.28□□□□□ -0.6
AFF3-201ENST00000317233 ZNF703Q9H7S9 590 aaPredicted RBP11.28□□□□□ -0.6
AFF3-201ENST00000317233 GRIFINA4D1Z8 144 aa11.28□□□□□ -0.6
AFF3-201ENST00000317233 PTGDSP41222 190 aa11.28□□□□□ -0.6
AFF3-201ENST00000317233 C12orf73Q69YU5 71 aa11.28□□□□□ -0.6
AFF3-201ENST00000317233 PPP1R27Q86WC6 154 aa11.28□□□□□ -0.6
AFF3-201ENST00000317233 FGFRL1Q8N441 504 aa11.28□□□□□ -0.6
AFF3-201ENST00000317233 IGF2P01344 180 aa11.28□□□□□ -0.6
AFF3-201ENST00000317233 NPC2P61916 151 aa11.28□□□□□ -0.6
AFF3-201ENST00000317233 ITGB4P16144 1822 aa11.28□□□□□ -0.6
AFF3-201ENST00000317233 NBEAP1P0C6P0 100 aa11.28□□□□□ -0.6
AFF3-201ENST00000317233 SCARF2Q96GP6 870 aaPredicted RBP11.28□□□□□ -0.6
AFF3-201ENST00000317233 DPM2O94777 84 aa11.27□□□□□ -0.6
AFF3-201ENST00000317233 TNFRSF9Q07011 255 aa11.27□□□□□ -0.6
AFF3-201ENST00000317233 OCIAD2Q56VL3 154 aa11.27□□□□□ -0.6
AFF3-201ENST00000317233 TCTEX1D4Q5JR98 221 aa11.27□□□□□ -0.6
AFF3-201ENST00000317233 MRPL52Q86TS9 123 aaKnown RBP11.27□□□□□ -0.6
AFF3-201ENST00000317233 TEX45Q8NA69 505 aa11.27□□□□□ -0.6
AFF3-201ENST00000317233 A0A0U1RQV5 110 aa11.27□□□□□ -0.6
AFF3-201ENST00000317233 TMEM238C9JI98 176 aa11.27□□□□□ -0.6
AFF3-201ENST00000317233 IGKV1D-33P01593 117 aa11.27□□□□□ -0.6
AFF3-201ENST00000317233 IGKV1-33P01594 117 aa11.27□□□□□ -0.6
AFF3-201ENST00000317233 PRSS41Q7RTY9 318 aa11.27□□□□□ -0.6
AFF3-201ENST00000317233 NPIPB3Q92617 1050 aa11.27□□□□□ -0.6
AFF3-201ENST00000317233 DOCK1Q14185 1865 aa11.27□□□□□ -0.6
AFF3-201ENST00000317233 PLXND1Q9Y4D7 1925 aa11.27□□□□□ -0.6
AFF3-201ENST00000317233 CXorf65A6NEN9 183 aa11.27□□□□□ -0.61
AFF3-201ENST00000317233 CHKB-CPT1BH3BT56 60 aa11.27□□□□□ -0.61
AFF3-201ENST00000317233 MOSP00540 346 aa11.27□□□□□ -0.61
AFF3-201ENST00000317233 SMIM18P0DKX4 95 aa11.27□□□□□ -0.61
AFF3-201ENST00000317233 RUNX1Q01196 453 aa11.27□□□□□ -0.61
AFF3-201ENST00000317233 TBR1Q16650 682 aa11.27□□□□□ -0.61
AFF3-201ENST00000317233 ZNF114Q8NC26 417 aa11.27□□□□□ -0.61
AFF3-201ENST00000317233 ZNF625Q96I27 306 aaPredicted RBP11.27□□□□□ -0.61
AFF3-201ENST00000317233 MRM2Q9UI43 246 aaKnown RBP11.27□□□□□ -0.61
AFF3-201ENST00000317233 HMGCLL1Q8TB92 370 aa11.27□□□□□ -0.61
AFF3-201ENST00000317233 NABP2Q9BQ15 211 aa11.27□□□□□ -0.61
AFF3-201ENST00000317233 NHP2Q9NX24 153 aaKnown RBP11.27□□□□□ -0.61
AFF3-201ENST00000317233 TRGV11A0A075B6L2 103 aa11.27□□□□□ -0.61
AFF3-201ENST00000317233 CCL4P13236 92 aa11.27□□□□□ -0.61
AFF3-201ENST00000317233 APOBEC3AP31941 199 aaPredicted RBP11.27□□□□□ -0.61
AFF3-201ENST00000317233 ATP5IP56385 69 aaPredicted RBP11.27□□□□□ -0.61
AFF3-201ENST00000317233 ASCL2Q99929 193 aa11.27□□□□□ -0.61
AFF3-201ENST00000317233 V9GYH0 126 aa11.27□□□□□ -0.61
AFF3-201ENST00000317233 COL11A1P12107 1806 aaPredicted RBP11.27□□□□□ -0.61
AFF3-201ENST00000317233 INAFM2P0DMQ5 153 aa11.27□□□□□ -0.61
AFF3-201ENST00000317233 GFI1BQ5VTD9 330 aa11.27□□□□□ -0.61
AFF3-201ENST00000317233 CYP2G1PQ6ZSU1 146 aa11.27□□□□□ -0.61
AFF3-201ENST00000317233 OR52E5Q8NH55 327 aa11.27□□□□□ -0.61
AFF3-201ENST00000317233 GTF3AQ92664 365 aaKnown RBP11.27□□□□□ -0.61
AFF3-201ENST00000317233 ARHGAP21Q5T5U3 1957 aa11.27□□□□□ -0.61
AFF3-201ENST00000317233 ZIC3O60481 467 aa11.26□□□□□ -0.61
AFF3-201ENST00000317233 FOXA3P55318 350 aaPredicted RBP11.26□□□□□ -0.61
AFF3-201ENST00000317233 ZNF345Q14585 488 aa11.26□□□□□ -0.61
AFF3-201ENST00000317233 C3orf56Q8N813 242 aa11.26□□□□□ -0.61
AFF3-201ENST00000317233 WDR54Q9H977 334 aa11.26□□□□□ -0.61
AFF3-201ENST00000317233 NRN1Q9NPD7 142 aa11.26□□□□□ -0.61
AFF3-201ENST00000317233 TSC2P49815 1807 aa11.26□□□□□ -0.61
AFF3-201ENST00000317233 MUC21A0A0G2JKD1 596 aa11.26□□□□□ -0.61
AFF3-201ENST00000317233 MUC21A0A140T8X8 626 aa11.26□□□□□ -0.61
AFF3-201ENST00000317233 FAM90A26D6RGX4 464 aa11.26□□□□□ -0.61
AFF3-201ENST00000317233 HYAL3O43820 417 aaPredicted RBP11.26□□□□□ -0.61
AFF3-201ENST00000317233 MUC21Q5SSG8 566 aa11.26□□□□□ -0.61
AFF3-201ENST00000317233 WDFY2Q96P53 400 aa11.26□□□□□ -0.61
AFF3-201ENST00000317233 RPP21Q9H633 154 aaKnown RBP11.26□□□□□ -0.61
AFF3-201ENST00000317233 TCF20Q9UGU0 1960 aaKnown RBP11.26□□□□□ -0.61
AFF3-201ENST00000317233 SIGLEC14Q08ET2 396 aa11.26□□□□□ -0.61
AFF3-201ENST00000317233 LEAP2Q969E1 77 aa11.26□□□□□ -0.61
AFF3-201ENST00000317233 hADV29S1A0JD25 119 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms