RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 C19orf24Q9BVV8 132 aa11.31□□□□□ -0.6
VAMP2-201ENST00000316509 HINT2Q9BX68 163 aa11.31□□□□□ -0.6
VAMP2-201ENST00000316509 SDF2L1Q9HCN8 221 aa11.31□□□□□ -0.6
VAMP2-201ENST00000316509 ZNRD1Q9P1U0 126 aa11.31□□□□□ -0.6
VAMP2-201ENST00000316509 NCOR2Q9Y618 2525 aa11.31□□□□□ -0.6
VAMP2-201ENST00000316509 PPIAL4CA0A0B4J2A2 164 aa11.3□□□□□ -0.6
VAMP2-201ENST00000316509 TSPAN9O75954 239 aa11.3□□□□□ -0.6
VAMP2-201ENST00000316509 IGLV1-47P01700 117 aa11.3□□□□□ -0.6
VAMP2-201ENST00000316509 PPIAL4GP0DN37 164 aa11.3□□□□□ -0.6
VAMP2-201ENST00000316509 CEBPGP53567 150 aa11.3□□□□□ -0.6
VAMP2-201ENST00000316509 RAB5BP61020 215 aa11.3□□□□□ -0.6
VAMP2-201ENST00000316509 HNF4GQ14541 408 aa11.3□□□□□ -0.6
VAMP2-201ENST00000316509 ARSJQ5FYB0 599 aaPredicted RBP11.3□□□□□ -0.6
VAMP2-201ENST00000316509 DTX2Q86UW9 622 aa11.3□□□□□ -0.6
VAMP2-201ENST00000316509 CLEC7AQ9BXN2 247 aa11.3□□□□□ -0.6
VAMP2-201ENST00000316509 CTDSP1Q9GZU7 261 aa11.3□□□□□ -0.6
VAMP2-201ENST00000316509 ANKRD11Q6UB99 2663 aaPredicted RBP11.3□□□□□ -0.6
VAMP2-201ENST00000316509 C1orf196B1AJZ1 125 aa11.3□□□□□ -0.6
VAMP2-201ENST00000316509 YIF1AO95070 293 aa11.3□□□□□ -0.6
VAMP2-201ENST00000316509 CD81P60033 236 aa11.3□□□□□ -0.6
VAMP2-201ENST00000316509 HLA-DRB5Q30154 266 aa11.3□□□□□ -0.6
VAMP2-201ENST00000316509 WDR25Q64LD2 544 aaPredicted RBP11.3□□□□□ -0.6
VAMP2-201ENST00000316509 RNASEH2CQ8TDP1 164 aaKnown RBP11.3□□□□□ -0.6
VAMP2-201ENST00000316509 SLC35E1Q96K37 410 aa11.3□□□□□ -0.6
VAMP2-201ENST00000316509 NAT8Q9UHE5 227 aa11.3□□□□□ -0.6
VAMP2-201ENST00000316509 HCFC1P51610 2035 aa11.29□□□□□ -0.6
VAMP2-201ENST00000316509 IGHV2-26A0A0B4J1V2 119 aa11.29□□□□□ -0.6
VAMP2-201ENST00000316509 ZNF727A8MUV8 499 aa11.29□□□□□ -0.6
VAMP2-201ENST00000316509 PDE6DO43924 150 aa11.29□□□□□ -0.6
VAMP2-201ENST00000316509 CXorf1O96002 111 aa11.29□□□□□ -0.6
VAMP2-201ENST00000316509 IGLV2-23P01705 113 aa11.29□□□□□ -0.6
VAMP2-201ENST00000316509 LIPFP07098 398 aa11.29□□□□□ -0.6
VAMP2-201ENST00000316509 STAG3L2P0CL84 134 aa11.29□□□□□ -0.6
VAMP2-201ENST00000316509 STAG3L3P0CL85 134 aa11.29□□□□□ -0.6
VAMP2-201ENST00000316509 RNASE2P10153 161 aaKnown RBP11.29□□□□□ -0.6
VAMP2-201ENST00000316509 AKR1C3P42330 323 aa11.29□□□□□ -0.6
VAMP2-201ENST00000316509 RHOBP62745 196 aa11.29□□□□□ -0.6
VAMP2-201ENST00000316509 CDSNQ15517 529 aa11.29□□□□□ -0.6
VAMP2-201ENST00000316509 PNKDQ8N490 385 aa11.29□□□□□ -0.6
VAMP2-201ENST00000316509 BIN3Q9NQY0 253 aa11.29□□□□□ -0.6
VAMP2-201ENST00000316509 MT-CO2P00403 227 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 B2MP61769 119 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 PRR20EP86478 221 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 PRR20CP86479 221 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 PRR20DP86480 221 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 PRR20BP86481 221 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 PRR20AP86496 221 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 TMEM241Q24JQ0 296 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 C4orf17Q53FE4 359 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 C1orf159Q96HA4 380 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 YPEL4Q96NS1 127 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 IGF2RP11717 2491 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 F6UZH7 168 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 BUB1B-PAK6H3BSN5 160 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 RAB5AP20339 215 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 REG1BP48304 166 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 CD69Q07108 199 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 MIC13Q5XKP0 118 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 CYP2G1PQ6ZSU1 146 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 C1QL4Q86Z23 238 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 CHODLQ9H9P2 273 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 SLC45A2Q9UMX9 530 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 CACNA1AO00555 2505 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 SPENQ96T58 3664 aaKnown RBP11.28□□□□□ -0.6
VAMP2-201ENST00000316509 CFAP47Q6ZTR5 3102 aa11.28□□□□□ -0.6
VAMP2-201ENST00000316509 LYNX1G3V0Z9 82 aa11.27□□□□□ -0.6
VAMP2-201ENST00000316509 LYNX1P0DP58 116 aa11.27□□□□□ -0.6
VAMP2-201ENST00000316509 MMD2Q8IY49 270 aa11.27□□□□□ -0.6
VAMP2-201ENST00000316509 TMPRSS5Q9H3S3 457 aa11.27□□□□□ -0.6
VAMP2-201ENST00000316509 PATZ1Q9HBE1 687 aaKnown RBP11.27□□□□□ -0.6
VAMP2-201ENST00000316509 INSIG2Q9Y5U4 225 aa11.27□□□□□ -0.6
VAMP2-201ENST00000316509 PRRC2CQ9Y520 2896 aaKnown RBP11.27□□□□□ -0.6
VAMP2-201ENST00000316509 POLEQ07864 2286 aa11.27□□□□□ -0.6
VAMP2-201ENST00000316509 MGAQ8IWI9 3026 aa11.27□□□□□ -0.61
VAMP2-201ENST00000316509 M0R1W7 72 aa11.27□□□□□ -0.61
VAMP2-201ENST00000316509 VENTXO95231 258 aa11.27□□□□□ -0.61
VAMP2-201ENST00000316509 MYOD1P15172 320 aa11.27□□□□□ -0.61
VAMP2-201ENST00000316509 STPG3Q8N7X2 389 aa11.27□□□□□ -0.61
VAMP2-201ENST00000316509 RNF2Q99496 336 aa11.27□□□□□ -0.61
VAMP2-201ENST00000316509 ARL2-SNX15V9GYD0 113 aa11.27□□□□□ -0.61
VAMP2-201ENST00000316509 ICE1Q9Y2F5 2266 aa11.26□□□□□ -0.61
VAMP2-201ENST00000316509 TGOLN2O43493 480 aa11.26□□□□□ -0.61
VAMP2-201ENST00000316509 PAGE4O60829 102 aa11.26□□□□□ -0.61
VAMP2-201ENST00000316509 CLN5O75503 358 aa11.26□□□□□ -0.61
VAMP2-201ENST00000316509 COMPP49747 757 aaPredicted RBP11.26□□□□□ -0.61
VAMP2-201ENST00000316509 LY6DQ14210 128 aa11.26□□□□□ -0.61
VAMP2-201ENST00000316509 DIAPH2-AS1Q14236 149 aa11.26□□□□□ -0.61
VAMP2-201ENST00000316509 C1orf122Q6ZSJ8 110 aa11.26□□□□□ -0.61
VAMP2-201ENST00000316509 FAM24BQ8N5W8 94 aa11.26□□□□□ -0.61
VAMP2-201ENST00000316509 OR4F5Q8NH21 305 aa11.26□□□□□ -0.61
VAMP2-201ENST00000316509 OR4F4Q96R69 305 aa11.26□□□□□ -0.61
VAMP2-201ENST00000316509 SMIM7Q9BQ49 75 aa11.26□□□□□ -0.61
VAMP2-201ENST00000316509 ARFGEF3Q5TH69 2177 aa11.26□□□□□ -0.61
VAMP2-201ENST00000316509 CLDN34H7C241 214 aa11.26□□□□□ -0.61
VAMP2-201ENST00000316509 HMGB3O15347 200 aaKnown RBP11.26□□□□□ -0.61
VAMP2-201ENST00000316509 CRYGBP07316 175 aa11.26□□□□□ -0.61
VAMP2-201ENST00000316509 RND2P52198 227 aa11.26□□□□□ -0.61
VAMP2-201ENST00000316509 ZNF430Q9H8G1 570 aaPredicted RBP11.26□□□□□ -0.61
VAMP2-201ENST00000316509 DMXL2Q8TDJ6 3036 aa11.25□□□□□ -0.61
VAMP2-201ENST00000316509 BSNQ9UPA5 3926 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms