RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 THBS3P49746 956 aa12.03□□□□□ -0.48
CLK4-201ENST00000316308 ACOT6Q3I5F7 207 aaPredicted RBP12.03□□□□□ -0.48
CLK4-201ENST00000316308 C10orf55Q5SWW7 151 aa12.03□□□□□ -0.48
CLK4-201ENST00000316308 LINC01560Q8TB33 94 aa12.03□□□□□ -0.48
CLK4-201ENST00000316308 SIRT7Q9NRC8 400 aa12.03□□□□□ -0.48
CLK4-201ENST00000316308 NAT8Q9UHE5 227 aa12.03□□□□□ -0.48
CLK4-201ENST00000316308 SSUH2Q9Y2M2 353 aa12.03□□□□□ -0.48
CLK4-201ENST00000316308 TRBV20OR9-2A0A075B6H5 130 aa12.02□□□□□ -0.48
CLK4-201ENST00000316308 FAM90A9PA6NNJ1 464 aa12.02□□□□□ -0.48
CLK4-201ENST00000316308 ACTL6BO94805 426 aa12.02□□□□□ -0.48
CLK4-201ENST00000316308 NDUFB4O95168 129 aa12.02□□□□□ -0.48
CLK4-201ENST00000316308 MBP02144 154 aa12.02□□□□□ -0.48
CLK4-201ENST00000316308 TRGC1P0CF51 173 aa12.02□□□□□ -0.48
CLK4-201ENST00000316308 CHRNB4P30926 498 aa12.02□□□□□ -0.48
CLK4-201ENST00000316308 RND2P52198 227 aa12.02□□□□□ -0.48
CLK4-201ENST00000316308 BSXQ3C1V8 233 aa12.02□□□□□ -0.48
CLK4-201ENST00000316308 PDLIM3Q53GG5 364 aaPredicted RBP12.02□□□□□ -0.48
CLK4-201ENST00000316308 DIRC2Q96SL1 478 aa12.02□□□□□ -0.48
CLK4-201ENST00000316308 FOXA2Q9Y261 457 aaPredicted RBP12.02□□□□□ -0.48
CLK4-201ENST00000316308 J3QR06 171 aa12.02□□□□□ -0.49
CLK4-201ENST00000316308 PHOX2AO14813 284 aa12.02□□□□□ -0.49
CLK4-201ENST00000316308 SOD3P08294 240 aa12.02□□□□□ -0.49
CLK4-201ENST00000316308 IL6RP08887 468 aaPredicted RBP12.02□□□□□ -0.49
CLK4-201ENST00000316308 STPG3Q8N7X2 389 aa12.02□□□□□ -0.49
CLK4-201ENST00000316308 CORO2AQ92828 525 aa12.02□□□□□ -0.49
CLK4-201ENST00000316308 RNASE6Q93091 150 aaKnown RBP12.02□□□□□ -0.49
CLK4-201ENST00000316308 LINC00574Q9H8X3 128 aa12.02□□□□□ -0.49
CLK4-201ENST00000316308 GAB2Q9UQC2 676 aa12.02□□□□□ -0.49
CLK4-201ENST00000316308 ZNF835Q9Y2P0 537 aa12.02□□□□□ -0.49
CLK4-201ENST00000316308 PPIAL4EA0A075B759 164 aa12.01□□□□□ -0.49
CLK4-201ENST00000316308 TEX50A0A1B0GTY4 177 aa12.01□□□□□ -0.49
CLK4-201ENST00000316308 A0A1W2PPV4 95 aa12.01□□□□□ -0.49
CLK4-201ENST00000316308 CXorf65A6NEN9 183 aa12.01□□□□□ -0.49
CLK4-201ENST00000316308 SEC14L6B5MCN3 397 aa12.01□□□□□ -0.49
CLK4-201ENST00000316308 PPIAL4DF5H284 164 aa12.01□□□□□ -0.49
CLK4-201ENST00000316308 PPIAL4FP0DN26 164 aa12.01□□□□□ -0.49
CLK4-201ENST00000316308 TNFRSF1AP19438 455 aa12.01□□□□□ -0.49
CLK4-201ENST00000316308 PNRC1Q12796 327 aaPredicted RBP12.01□□□□□ -0.49
CLK4-201ENST00000316308 TMEM106BQ9NUM4 274 aa12.01□□□□□ -0.49
CLK4-201ENST00000316308 PPIAL4AQ9Y536 164 aa12.01□□□□□ -0.49
CLK4-201ENST00000316308 YTHDF2Q9Y5A9 579 aaKnown RBP12.01□□□□□ -0.49
CLK4-201ENST00000316308 LINC00312Q9Y6C7 94 aa12.01□□□□□ -0.49
CLK4-201ENST00000316308 IGHV3-72A0A0B4J1Y9 119 aa12.01□□□□□ -0.49
CLK4-201ENST00000316308 hADV38S2A0JD32 116 aa12.01□□□□□ -0.49
CLK4-201ENST00000316308 ITGB1BP1O14713 200 aa12.01□□□□□ -0.49
CLK4-201ENST00000316308 CHRNA7P36544 502 aa12.01□□□□□ -0.49
CLK4-201ENST00000316308 TMPRSS3P57727 454 aa12.01□□□□□ -0.49
CLK4-201ENST00000316308 B2MP61769 119 aa12.01□□□□□ -0.49
CLK4-201ENST00000316308 PMS2P11Q13670 270 aa12.01□□□□□ -0.49
CLK4-201ENST00000316308 ELOVL5Q9NYP7 299 aa12.01□□□□□ -0.49
CLK4-201ENST00000316308 ITPR1Q14643 2758 aa12.01□□□□□ -0.49
CLK4-201ENST00000316308 TRGV8A0A0C4DH27 118 aa12□□□□□ -0.49
CLK4-201ENST00000316308 B4DEV8 164 aa12□□□□□ -0.49
CLK4-201ENST00000316308 DVL1O14640 695 aa12□□□□□ -0.49
CLK4-201ENST00000316308 PFN1P07737 140 aaKnown RBP12□□□□□ -0.49
CLK4-201ENST00000316308 C1QTNF9P0C862 333 aa12□□□□□ -0.49
CLK4-201ENST00000316308 OPRK1P41145 380 aa12□□□□□ -0.49
CLK4-201ENST00000316308 LGALS4P56470 323 aa12□□□□□ -0.49
CLK4-201ENST00000316308 SSBP2P81877 361 aaPredicted RBP12□□□□□ -0.49
CLK4-201ENST00000316308 FAM216AQ8WUB2 273 aa12□□□□□ -0.49
CLK4-201ENST00000316308 IGFBPL1Q8WX77 278 aa12□□□□□ -0.49
CLK4-201ENST00000316308 ZNF714Q96N38 554 aa12□□□□□ -0.49
CLK4-201ENST00000316308 GPR61Q9BZJ8 451 aa12□□□□□ -0.49
CLK4-201ENST00000316308 NCOR1P1Q9H4R4 102 aa12□□□□□ -0.49
CLK4-201ENST00000316308 NIT2Q9NQR4 276 aa12□□□□□ -0.49
CLK4-201ENST00000316308 TPSG1Q9NRR2 321 aa12□□□□□ -0.49
CLK4-201ENST00000316308 CELSR1Q9NYQ6 3014 aa12□□□□□ -0.49
CLK4-201ENST00000316308 TMEM250H0YL14 139 aa12□□□□□ -0.49
CLK4-201ENST00000316308 K7ENP7 123 aa12□□□□□ -0.49
CLK4-201ENST00000316308 UPK2O00526 184 aa12□□□□□ -0.49
CLK4-201ENST00000316308 KIR2DS2P43631 304 aa12□□□□□ -0.49
CLK4-201ENST00000316308 FAM3BP58499 235 aaPredicted RBP12□□□□□ -0.49
CLK4-201ENST00000316308 EFNB3Q15768 340 aa12□□□□□ -0.49
CLK4-201ENST00000316308 RUSC1-AS1Q66K80 236 aa12□□□□□ -0.49
CLK4-201ENST00000316308 C19orf35Q6ZS72 473 aa12□□□□□ -0.49
CLK4-201ENST00000316308 NEIL1Q96FI4 390 aaPredicted RBP12□□□□□ -0.49
CLK4-201ENST00000316308 NPVFQ9HCQ7 196 aa12□□□□□ -0.49
CLK4-201ENST00000316308 SCO2A0A1W2PP80 73 aa11.99□□□□□ -0.49
CLK4-201ENST00000316308 TNFRSF13BO14836 293 aaPredicted RBP11.99□□□□□ -0.49
CLK4-201ENST00000316308 SIAH2O43255 324 aa11.99□□□□□ -0.49
CLK4-201ENST00000316308 LY6HO94772 140 aa11.99□□□□□ -0.49
CLK4-201ENST00000316308 RD3LP0DJH9 198 aa11.99□□□□□ -0.49
CLK4-201ENST00000316308 HOXA5P20719 270 aa11.99□□□□□ -0.49
CLK4-201ENST00000316308 C1orf87Q8N0U7 546 aa11.99□□□□□ -0.49
CLK4-201ENST00000316308 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.99□□□□□ -0.49
CLK4-201ENST00000316308 PCGF1Q9BSM1 259 aa11.99□□□□□ -0.49
CLK4-201ENST00000316308 MANBALQ9NQG1 85 aa11.99□□□□□ -0.49
CLK4-201ENST00000316308 STAG3L2P0CL84 134 aa11.99□□□□□ -0.49
CLK4-201ENST00000316308 STAG3L3P0CL85 134 aa11.99□□□□□ -0.49
CLK4-201ENST00000316308 APELAP0DMC3 54 aa11.99□□□□□ -0.49
CLK4-201ENST00000316308 LOXP28300 417 aaPredicted RBP11.99□□□□□ -0.49
CLK4-201ENST00000316308 ZNF833PQ6ZTB9 187 aa11.99□□□□□ -0.49
CLK4-201ENST00000316308 MIR17HGQ75NE6 70 aa11.99□□□□□ -0.49
CLK4-201ENST00000316308 OR9G1Q8NH87 305 aa11.99□□□□□ -0.49
CLK4-201ENST00000316308 HARBI1Q96MB7 349 aa11.99□□□□□ -0.49
CLK4-201ENST00000316308 MAP1AP78559 2803 aaPredicted RBP11.98□□□□□ -0.49
CLK4-201ENST00000316308 A0A1W2PPQ1 181 aa11.98□□□□□ -0.49
CLK4-201ENST00000316308 H0YJW9 148 aa11.98□□□□□ -0.49
CLK4-201ENST00000316308 SNRPCP09234 159 aaKnown RBP11.98□□□□□ -0.49
CLK4-201ENST00000316308 TEPPQ6URK8 271 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms