RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 SLC17A3O00476 420 aa11.58□□□□□ -0.56
SPAST-201ENST00000315285 NEU1Q99519 415 aa11.58□□□□□ -0.56
SPAST-201ENST00000315285 THSD7BQ9C0I4 1608 aa11.58□□□□□ -0.56
SPAST-201ENST00000315285 NTN3O00634 580 aaPredicted RBP11.57□□□□□ -0.56
SPAST-201ENST00000315285 GPX4P36969 197 aaPredicted RBP11.57□□□□□ -0.56
SPAST-201ENST00000315285 ZNF841Q6ZN19 808 aa11.57□□□□□ -0.56
SPAST-201ENST00000315285 ZNF738Q8NE65 137 aa11.57□□□□□ -0.56
SPAST-201ENST00000315285 C16orf92Q96LL3 132 aa11.57□□□□□ -0.56
SPAST-201ENST00000315285 ROS1P08922 2347 aa11.57□□□□□ -0.56
SPAST-201ENST00000315285 ID1P41134 155 aa11.57□□□□□ -0.56
SPAST-201ENST00000315285 IL36BQ9NZH7 164 aa11.57□□□□□ -0.56
SPAST-201ENST00000315285 RNF224P0DH78 156 aa11.57□□□□□ -0.56
SPAST-201ENST00000315285 SFTPCP11686 197 aa11.57□□□□□ -0.56
SPAST-201ENST00000315285 FOLR2P14207 255 aa11.57□□□□□ -0.56
SPAST-201ENST00000315285 HOXA5P20719 270 aa11.57□□□□□ -0.56
SPAST-201ENST00000315285 ZNF324BQ6AW86 544 aaPredicted RBP11.57□□□□□ -0.56
SPAST-201ENST00000315285 GGNQ86UU5 652 aa11.57□□□□□ -0.56
SPAST-201ENST00000315285 CYTL1Q9NRR1 136 aa11.57□□□□□ -0.56
SPAST-201ENST00000315285 PTPRDP23468 1912 aa11.57□□□□□ -0.56
SPAST-201ENST00000315285 TSC2P49815 1807 aa11.57□□□□□ -0.56
SPAST-201ENST00000315285 MYLKQ15746 1914 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 IGKV1-27A0A075B6S5 117 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 RPL23P62829 140 aaKnown RBP11.56□□□□□ -0.56
SPAST-201ENST00000315285 FHL1Q13642 323 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 FNDC1Q4ZHG4 1894 aaPredicted RBP11.56□□□□□ -0.56
SPAST-201ENST00000315285 IGKV3D-15A0A087WSY6 115 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 OR4C46A6NHA9 309 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 TMPRSS3P57727 454 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 CCL20P78556 96 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 PSG9Q00887 426 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 CSRP2Q16527 193 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 ATG101Q9BSB4 218 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 PNRC2Q9NPJ4 139 aaKnown RBP11.56□□□□□ -0.56
SPAST-201ENST00000315285 GSN-AS1Q9NRJ2 163 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 MPDZO75970 2070 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 NPIPB11E5RHQ5 1161 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 RAMP3O60896 148 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 IL4P05112 153 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 SOD3P08294 240 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 FOXG1P55316 489 aaPredicted RBP11.56□□□□□ -0.56
SPAST-201ENST00000315285 WDR82Q6UXN9 313 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 MGAMO43451 1857 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 LOC105371242A0A075B767 164 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 CGB1A6NKQ9 187 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 SS18L1O75177 396 aaPredicted RBP11.56□□□□□ -0.56
SPAST-201ENST00000315285 NBEAP1P0C6P0 100 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 OR10J6PQ8NGY7 276 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 COL25A1Q9BXS0 654 aaPredicted RBP11.56□□□□□ -0.56
SPAST-201ENST00000315285 DCAF16Q9NXF7 216 aa11.56□□□□□ -0.56
SPAST-201ENST00000315285 CD55P08174 381 aa11.55□□□□□ -0.56
SPAST-201ENST00000315285 BTF3P20290 206 aaKnown RBP11.55□□□□□ -0.56
SPAST-201ENST00000315285 C5orf63A6NC05 138 aa11.55□□□□□ -0.56
SPAST-201ENST00000315285 CD5P06127 495 aa11.55□□□□□ -0.56
SPAST-201ENST00000315285 PF4V1P10720 104 aa11.55□□□□□ -0.56
SPAST-201ENST00000315285 OTX1P32242 354 aaPredicted RBP11.55□□□□□ -0.56
SPAST-201ENST00000315285 RPS20P60866 119 aaKnown RBP11.55□□□□□ -0.56
SPAST-201ENST00000315285 RNF144BQ7Z419 303 aa11.55□□□□□ -0.56
SPAST-201ENST00000315285 REC114Q7Z4M0 266 aa11.55□□□□□ -0.56
SPAST-201ENST00000315285 AP5S1Q9NUS5 200 aa11.55□□□□□ -0.56
SPAST-201ENST00000315285 YPEL1O60688 119 aa11.55□□□□□ -0.56
SPAST-201ENST00000315285 APOBEC3AP31941 199 aaPredicted RBP11.55□□□□□ -0.56
SPAST-201ENST00000315285 PSMB2P49721 201 aa11.55□□□□□ -0.56
SPAST-201ENST00000315285 HBBP68871 147 aa11.55□□□□□ -0.56
SPAST-201ENST00000315285 C12orf54Q6X4T0 127 aa11.55□□□□□ -0.56
SPAST-201ENST00000315285 YPEL2Q96QA6 119 aa11.55□□□□□ -0.56
SPAST-201ENST00000315285 GFRA1P56159 465 aa11.55□□□□□ -0.56
SPAST-201ENST00000315285 MIR17HGQ75NE6 70 aa11.55□□□□□ -0.56
SPAST-201ENST00000315285 IMMP2LQ96T52 175 aa11.55□□□□□ -0.56
SPAST-201ENST00000315285 MRPL20Q9BYC9 149 aaKnown RBP11.55□□□□□ -0.56
SPAST-201ENST00000315285 CLEC2AQ6UVW9 174 aa11.54□□□□□ -0.56
SPAST-201ENST00000315285 REG4Q9BYZ8 158 aa11.54□□□□□ -0.56
SPAST-201ENST00000315285 C5orf52A6NGY3 159 aa11.54□□□□□ -0.56
SPAST-201ENST00000315285 MEF2CQ06413 473 aaPredicted RBP11.54□□□□□ -0.56
SPAST-201ENST00000315285 SLC25A34Q6PIV7 304 aa11.54□□□□□ -0.56
SPAST-201ENST00000315285 ATOH7Q8N100 152 aa11.54□□□□□ -0.56
SPAST-201ENST00000315285 CACNG8Q8WXS5 425 aa11.54□□□□□ -0.56
SPAST-201ENST00000315285 LINC00312Q9Y6C7 94 aa11.54□□□□□ -0.56
SPAST-201ENST00000315285 ACACAQ13085 2346 aa11.54□□□□□ -0.56
SPAST-201ENST00000315285 A0A1W2PS18 150 aa11.54□□□□□ -0.56
SPAST-201ENST00000315285 CIDEAO60543 219 aa11.54□□□□□ -0.56
SPAST-201ENST00000315285 SNCGO76070 127 aa11.54□□□□□ -0.56
SPAST-201ENST00000315285 GATA2P23769 480 aaPredicted RBP11.54□□□□□ -0.56
SPAST-201ENST00000315285 QRFPP83859 136 aa11.54□□□□□ -0.56
SPAST-201ENST00000315285 LINC01560Q8TB33 94 aa11.54□□□□□ -0.56
SPAST-201ENST00000315285 GPR179Q6PRD1 2367 aa11.54□□□□□ -0.56
SPAST-201ENST00000315285 TFF1P04155 84 aa11.54□□□□□ -0.56
SPAST-201ENST00000315285 ANOS1P23352 680 aa11.54□□□□□ -0.56
SPAST-201ENST00000315285 DLX1P56177 255 aa11.54□□□□□ -0.56
SPAST-201ENST00000315285 OR10AG1Q8NH19 301 aa11.54□□□□□ -0.56
SPAST-201ENST00000315285 RSPO3Q9BXY4 272 aaPredicted RBP11.54□□□□□ -0.56
SPAST-201ENST00000315285 FBXL15Q9H469 300 aa11.54□□□□□ -0.56
SPAST-201ENST00000315285 SAA2-SAA4A0A096LPE2 208 aa11.53□□□□□ -0.56
SPAST-201ENST00000315285 SAA2P0DJI9 122 aaPredicted RBP11.53□□□□□ -0.56
SPAST-201ENST00000315285 FOXA3P55318 350 aaPredicted RBP11.53□□□□□ -0.56
SPAST-201ENST00000315285 BSPH1Q075Z2 132 aa11.53□□□□□ -0.56
SPAST-201ENST00000315285 MORN2Q502X0 79 aa11.53□□□□□ -0.56
SPAST-201ENST00000315285 MAP1LC3AQ9H492 121 aa11.53□□□□□ -0.56
SPAST-201ENST00000315285 PEX7O00628 323 aa11.53□□□□□ -0.56
SPAST-201ENST00000315285 HLA-DRB1P01911 266 aa11.53□□□□□ -0.56
SPAST-201ENST00000315285 TMEM144Q7Z5S9 345 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms