RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 TIMM8AO60220 97 aaPredicted RBP11.08□□□□□ -0.64
SKA3-202ENST00000314759 IGLC2P0DOY2 106 aa11.08□□□□□ -0.64
SKA3-202ENST00000314759 IGLC3P0DOY3 106 aa11.08□□□□□ -0.64
SKA3-202ENST00000314759 ERVK-16P61578 105 aa11.08□□□□□ -0.64
SKA3-202ENST00000314759 ARG2P78540 354 aa11.08□□□□□ -0.64
SKA3-202ENST00000314759 INO80CQ6PI98 192 aaPredicted RBP11.08□□□□□ -0.64
SKA3-202ENST00000314759 ATOH7Q8N100 152 aa11.08□□□□□ -0.64
SKA3-202ENST00000314759 STARD4Q96DR4 205 aa11.08□□□□□ -0.64
SKA3-202ENST00000314759 V9GYV3 84 aa11.08□□□□□ -0.64
SKA3-202ENST00000314759 PRDX2P32119 198 aa11.08□□□□□ -0.64
SKA3-202ENST00000314759 AMTP48728 403 aa11.08□□□□□ -0.64
SKA3-202ENST00000314759 FABP6P51161 128 aa11.08□□□□□ -0.64
SKA3-202ENST00000314759 PTTG1IPP53801 180 aa11.08□□□□□ -0.64
SKA3-202ENST00000314759 RHOBP62745 196 aa11.08□□□□□ -0.64
SKA3-202ENST00000314759 TEPPQ6URK8 271 aa11.08□□□□□ -0.64
SKA3-202ENST00000314759 C1orf229Q6ZS94 237 aaPredicted RBP11.08□□□□□ -0.64
SKA3-202ENST00000314759 OR4P4Q8NGL7 312 aa11.08□□□□□ -0.64
SKA3-202ENST00000314759 TXN2Q99757 166 aa11.08□□□□□ -0.64
SKA3-202ENST00000314759 TUBG2Q9NRH3 451 aa11.08□□□□□ -0.64
SKA3-202ENST00000314759 ZNF586Q9NXT0 402 aa11.08□□□□□ -0.64
SKA3-202ENST00000314759 LAMTOR2Q9Y2Q5 125 aa11.08□□□□□ -0.64
SKA3-202ENST00000314759 A8MXE2 369 aa11.07□□□□□ -0.64
SKA3-202ENST00000314759 CGAP01215 116 aa11.07□□□□□ -0.64
SKA3-202ENST00000314759 RPEL1Q2QD12 228 aa11.07□□□□□ -0.64
SKA3-202ENST00000314759 TRAT1Q6PIZ9 186 aa11.07□□□□□ -0.64
SKA3-202ENST00000314759 UHRF2Q96PU4 802 aa11.07□□□□□ -0.64
SKA3-202ENST00000314759 LY96Q9Y6Y9 160 aa11.07□□□□□ -0.64
SKA3-202ENST00000314759 DSPP15924 2871 aaKnown RBP11.07□□□□□ -0.64
SKA3-202ENST00000314759 A0A1W2PS18 150 aa11.07□□□□□ -0.64
SKA3-202ENST00000314759 C21orf140B9A014 251 aa11.07□□□□□ -0.64
SKA3-202ENST00000314759 ZNF83P51522 516 aa11.07□□□□□ -0.64
SKA3-202ENST00000314759 UTF1Q5T230 341 aa11.07□□□□□ -0.64
SKA3-202ENST00000314759 FAM19A2Q8N3H0 131 aa11.07□□□□□ -0.64
SKA3-202ENST00000314759 LRRC29Q8WV35 223 aa11.07□□□□□ -0.64
SKA3-202ENST00000314759 S1PR3Q99500 378 aa11.07□□□□□ -0.64
SKA3-202ENST00000314759 IFI27L2Q9H2X8 130 aa11.07□□□□□ -0.64
SKA3-202ENST00000314759 YLPM1P49750 1951 aaKnown RBP11.06□□□□□ -0.64
SKA3-202ENST00000314759 LOXL3P58215 753 aa11.06□□□□□ -0.64
SKA3-202ENST00000314759 UNQ5815/PRO19632Q6UWF5 114 aa11.06□□□□□ -0.64
SKA3-202ENST00000314759 UQCR10Q9UDW1 63 aa11.06□□□□□ -0.64
SKA3-202ENST00000314759 NAT8BQ9UHF3 227 aa11.06□□□□□ -0.64
SKA3-202ENST00000314759 JPT1Q9UK76 154 aa11.06□□□□□ -0.64
SKA3-202ENST00000314759 TRGV8A0A0C4DH27 118 aa11.06□□□□□ -0.64
SKA3-202ENST00000314759 AHRRA9YTQ3 701 aa11.06□□□□□ -0.64
SKA3-202ENST00000314759 LAMTOR5O43504 91 aa11.06□□□□□ -0.64
SKA3-202ENST00000314759 IGKV3-15P01624 115 aa11.06□□□□□ -0.64
SKA3-202ENST00000314759 HINT1P49773 126 aaPredicted RBP11.06□□□□□ -0.64
SKA3-202ENST00000314759 HNRNPA3P51991 378 aaKnown RBP11.06□□□□□ -0.64
SKA3-202ENST00000314759 SFXN3Q9BWM7 321 aa11.06□□□□□ -0.64
SKA3-202ENST00000314759 GNB1LQ9BYB4 327 aa11.06□□□□□ -0.64
SKA3-202ENST00000314759 IGKV1D-17A0A075B6S4 117 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 MT-CO2P00403 227 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 C3orf79P0CE67 100 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 CD46P15529 392 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 Q6ZT83 130 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 MIR17HGQ75NE6 70 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 UBALD2Q8IYN6 164 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 DUSP13Q9UII6 198 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 LOC400499M0QZD8 3231 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 C15orf61A6NNL5 157 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 ZNF253O75346 499 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 ACTL6BO94805 426 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 IGFBP2P18065 325 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 NPY1RP25929 384 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 TCL1AP56279 114 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 PRR20EP86478 221 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 PRR20CP86479 221 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 PRR20DP86480 221 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 PRR20BP86481 221 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 PRR20AP86496 221 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 CENPWQ5EE01 88 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 LCN12Q6JVE5 192 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 SLC24A4Q8NFF2 622 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 DDB2Q92466 427 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 CA2P00918 260 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 LINC00869P0C866 280 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 AREGP15514 252 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 CRYBB3P26998 211 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 FXYD3Q14802 87 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 ASPHD1Q5U4P2 390 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 NIT1Q86X76 327 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 DOLPP1Q86YN1 238 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 ARL6IP6Q8N6S5 226 aa11.05□□□□□ -0.64
SKA3-202ENST00000314759 RNASE7Q9H1E1 156 aaKnown RBP11.05□□□□□ -0.64
SKA3-202ENST00000314759 GPR179Q6PRD1 2367 aa11.04□□□□□ -0.64
SKA3-202ENST00000314759 TRBV9A0A0B4J1U6 114 aa11.04□□□□□ -0.64
SKA3-202ENST00000314759 HELTA6NFD8 242 aa11.04□□□□□ -0.64
SKA3-202ENST00000314759 NKX6-3A6NJ46 265 aa11.04□□□□□ -0.64
SKA3-202ENST00000314759 GNG4P50150 75 aa11.04□□□□□ -0.64
SKA3-202ENST00000314759 LEMD1Q68G75 181 aa11.04□□□□□ -0.64
SKA3-202ENST00000314759 PQLC2Q6ZP29 291 aa11.04□□□□□ -0.64
SKA3-202ENST00000314759 LYG1Q8N1E2 194 aa11.04□□□□□ -0.64
SKA3-202ENST00000314759 LEAP2Q969E1 77 aa11.04□□□□□ -0.64
SKA3-202ENST00000314759 MYOD1P15172 320 aa11.04□□□□□ -0.64
SKA3-202ENST00000314759 CEACAM8P31997 349 aaPredicted RBP11.04□□□□□ -0.64
SKA3-202ENST00000314759 CX3CL1P78423 397 aa11.04□□□□□ -0.64
SKA3-202ENST00000314759 RAB31Q13636 194 aa11.04□□□□□ -0.64
SKA3-202ENST00000314759 PSG5Q15238 335 aa11.04□□□□□ -0.64
SKA3-202ENST00000314759 TMEM136Q6ZRR5 245 aa11.04□□□□□ -0.64
SKA3-202ENST00000314759 FAM214BQ7L5A3 538 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms