RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 DUSP13Q9UII6 198 aa11.42□□□□□ -0.58
MKS1-201ENST00000313863 PRNDQ9UKY0 176 aa11.42□□□□□ -0.58
MKS1-201ENST00000313863 TRAV3A0A0B4J244 114 aa11.41□□□□□ -0.58
MKS1-201ENST00000313863 IGHG3P01860 377 aa11.41□□□□□ -0.58
MKS1-201ENST00000313863 G0S2P27469 103 aa11.41□□□□□ -0.58
MKS1-201ENST00000313863 LRP11Q86VZ4 500 aa11.41□□□□□ -0.58
MKS1-201ENST00000313863 PNKDQ8N490 385 aa11.41□□□□□ -0.58
MKS1-201ENST00000313863 C1orf159Q96HA4 380 aa11.41□□□□□ -0.58
MKS1-201ENST00000313863 CALYQ9NYX4 217 aa11.41□□□□□ -0.58
MKS1-201ENST00000313863 IGKV1D-17A0A075B6S4 117 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 CA2P00918 260 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 LINC00310P59036 64 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 CX3CL1P78423 397 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 KRTCAP3Q53RY4 240 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 CENPWQ5EE01 88 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 SPATA31B1PQ5VZV4 182 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 OR4A47Q6IF82 309 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 RNF2Q99496 336 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 LRFN3Q9BTN0 628 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 TMEM208Q9BTX3 173 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 ZNF257Q9Y2Q1 563 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 ISLRO14498 428 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 MMP23AO75900 390 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 CGAP01215 116 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 IGLV1-44P01699 117 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 PSG5Q15238 335 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 POU2AF1Q16633 256 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 OR8I2Q8N0Y5 310 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 OR2Z1Q8NG97 314 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 VN1R17PQ8TDU5 208 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 NAT8BQ9UHF3 227 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 GOLT1BQ9Y3E0 138 aa11.4□□□□□ -0.58
MKS1-201ENST00000313863 HEATR1Q9H583 2144 aaKnown RBP11.4□□□□□ -0.59
MKS1-201ENST00000313863 IGHV2OR16-5A0A0B4J2B6 119 aa11.39□□□□□ -0.59
MKS1-201ENST00000313863 A0A1W2PNU3 283 aaPredicted RBP11.39□□□□□ -0.59
MKS1-201ENST00000313863 HLA-DQA1P01909 254 aa11.39□□□□□ -0.59
MKS1-201ENST00000313863 GPX1P07203 203 aa11.39□□□□□ -0.59
MKS1-201ENST00000313863 IGFBP2P18065 325 aa11.39□□□□□ -0.59
MKS1-201ENST00000313863 TMEM30BQ3MIR4 351 aa11.39□□□□□ -0.59
MKS1-201ENST00000313863 FAM169BQ8N8A8 192 aa11.39□□□□□ -0.59
MKS1-201ENST00000313863 PLEKHA3Q9HB20 300 aa11.39□□□□□ -0.59
MKS1-201ENST00000313863 FZR1Q9UM11 496 aa11.39□□□□□ -0.59
MKS1-201ENST00000313863 OR51B2Q9Y5P1 312 aa11.39□□□□□ -0.59
MKS1-201ENST00000313863 FOXH1O75593 365 aa11.39□□□□□ -0.59
MKS1-201ENST00000313863 AMY1AP04745 511 aa11.39□□□□□ -0.59
MKS1-201ENST00000313863 REG1AP05451 166 aa11.39□□□□□ -0.59
MKS1-201ENST00000313863 LINC00869P0C866 280 aa11.39□□□□□ -0.59
MKS1-201ENST00000313863 ZNF134P52741 427 aa11.39□□□□□ -0.59
MKS1-201ENST00000313863 HOXA4Q00056 320 aaPredicted RBP11.39□□□□□ -0.59
MKS1-201ENST00000313863 LPAL2Q16609 132 aa11.39□□□□□ -0.59
MKS1-201ENST00000313863 MIR17HGQ75NE6 70 aa11.39□□□□□ -0.59
MKS1-201ENST00000313863 PLPPR2Q96GM1 343 aa11.39□□□□□ -0.59
MKS1-201ENST00000313863 NABP2Q9BQ15 211 aa11.39□□□□□ -0.59
MKS1-201ENST00000313863 PAM16Q9Y3D7 125 aa11.39□□□□□ -0.59
MKS1-201ENST00000313863 YLPM1P49750 1951 aaKnown RBP11.38□□□□□ -0.59
MKS1-201ENST00000313863 TANC2Q9HCD6 1990 aa11.38□□□□□ -0.59
MKS1-201ENST00000313863 TRIOBPQ9H2D6 2365 aa11.38□□□□□ -0.59
MKS1-201ENST00000313863 KCNS1Q96KK3 526 aa11.38□□□□□ -0.59
MKS1-201ENST00000313863 GNB4Q9HAV0 340 aa11.38□□□□□ -0.59
MKS1-201ENST00000313863 IDI2-AS1Q9NZ38 188 aa11.38□□□□□ -0.59
MKS1-201ENST00000313863 CACNA1GO43497 2377 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 A0A1W2PRE2 83 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 DIRC3C9JPN6 131 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 CRYBB3P26998 211 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 CDKN1AP38936 164 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 KIR2DL2P43627 348 aaPredicted RBP11.37□□□□□ -0.59
MKS1-201ENST00000313863 PRCDQ00LT1 54 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 ANKRD39Q53RE8 183 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 MRPL32Q9BYC8 188 aaKnown RBP11.37□□□□□ -0.59
MKS1-201ENST00000313863 DSCAML1Q8TD84 2053 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 PRR33A8MZF0 331 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 J3QR06 171 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 ZNF253O75346 499 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 ACTL6BO94805 426 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 SAA2P0DJI9 122 aaPredicted RBP11.37□□□□□ -0.59
MKS1-201ENST00000313863 CGB3P0DN86 165 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 CGB7P0DN87 165 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 IRF2P14316 349 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 KRTDAPP60985 99 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 SUMO1P63165 101 aaKnown RBP11.37□□□□□ -0.59
MKS1-201ENST00000313863 MRPS11P82912 194 aaKnown RBP11.37□□□□□ -0.59
MKS1-201ENST00000313863 OR5I1Q13606 314 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 COL5A1-AS1Q5SY13 56 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 RASL11AQ6T310 242 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 TMEM136Q6ZRR5 245 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 ST6GALNAC3Q8NDV1 305 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 HINT2Q9BX68 163 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 COMMD5Q9GZQ3 224 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 PLSCR4Q9NRQ2 329 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 KNTC1P50748 2209 aa11.37□□□□□ -0.59
MKS1-201ENST00000313863 IGHV1-18A0A0C4DH31 117 aa11.36□□□□□ -0.59
MKS1-201ENST00000313863 KBTBD11-OT1A0A1B0GTJ5 212 aa11.36□□□□□ -0.59
MKS1-201ENST00000313863 OR7C2O60412 319 aa11.36□□□□□ -0.59
MKS1-201ENST00000313863 AMTP48728 403 aa11.36□□□□□ -0.59
MKS1-201ENST00000313863 C2orf83Q53S99 150 aa11.36□□□□□ -0.59
MKS1-201ENST00000313863 CT45A1Q5HYN5 189 aa11.36□□□□□ -0.59
MKS1-201ENST00000313863 C19orf35Q6ZS72 473 aa11.36□□□□□ -0.59
MKS1-201ENST00000313863 CT45A3Q8NHU0 189 aa11.36□□□□□ -0.59
MKS1-201ENST00000313863 SARAFQ96BY9 339 aa11.36□□□□□ -0.59
MKS1-201ENST00000313863 ARRDC1-AS1Q9H2J1 176 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms