RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 TRAV8-2A0A0B4J237 113 aa11.58□□□□□ -0.55
CLCN6-201ENST00000312413 HIGD1CA8MV81 97 aa11.58□□□□□ -0.55
CLCN6-201ENST00000312413 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.58□□□□□ -0.55
CLCN6-201ENST00000312413 DNASE2BQ8WZ79 361 aa11.58□□□□□ -0.55
CLCN6-201ENST00000312413 C11orf68Q9H3H3 251 aaKnown RBP11.58□□□□□ -0.55
CLCN6-201ENST00000312413 ARAP2Q8WZ64 1704 aa11.58□□□□□ -0.56
CLCN6-201ENST00000312413 PGPEP1LA6NFU8 196 aa11.58□□□□□ -0.56
CLCN6-201ENST00000312413 FADS6Q8N9I5 356 aa11.58□□□□□ -0.56
CLCN6-201ENST00000312413 TRAV9-2A0A087WT02 112 aa11.58□□□□□ -0.56
CLCN6-201ENST00000312413 SPAARA0A1B0GVQ0 90 aa11.58□□□□□ -0.56
CLCN6-201ENST00000312413 SYNGR3O43761 229 aa11.58□□□□□ -0.56
CLCN6-201ENST00000312413 TGFAP01135 160 aa11.58□□□□□ -0.56
CLCN6-201ENST00000312413 RNF126Q9BV68 326 aa11.58□□□□□ -0.56
CLCN6-201ENST00000312413 ATG2BQ96BY7 2078 aa11.58□□□□□ -0.56
CLCN6-201ENST00000312413 C17orf98A8MV24 154 aa11.58□□□□□ -0.56
CLCN6-201ENST00000312413 ZXDCQ2QGD7 858 aaPredicted RBP11.58□□□□□ -0.56
CLCN6-201ENST00000312413 OR4X2Q8NGF9 303 aa11.58□□□□□ -0.56
CLCN6-201ENST00000312413 BTCP35070 178 aa11.58□□□□□ -0.56
CLCN6-201ENST00000312413 ADMP35318 185 aa11.58□□□□□ -0.56
CLCN6-201ENST00000312413 TNFRSF18Q9Y5U5 241 aa11.58□□□□□ -0.56
CLCN6-201ENST00000312413 C9orf172C9J069 976 aa11.57□□□□□ -0.56
CLCN6-201ENST00000312413 CTSSP25774 331 aa11.57□□□□□ -0.56
CLCN6-201ENST00000312413 SRSF3P84103 164 aaKnown RBP11.57□□□□□ -0.56
CLCN6-201ENST00000312413 OR5A1Q8NGJ0 315 aa11.57□□□□□ -0.56
CLCN6-201ENST00000312413 SVILO95425 2214 aa11.57□□□□□ -0.56
CLCN6-201ENST00000312413 PROB1E7EW31 1015 aa11.57□□□□□ -0.56
CLCN6-201ENST00000312413 MIR17HGQ75NE6 70 aa11.57□□□□□ -0.56
CLCN6-201ENST00000312413 ZNRF1Q8ND25 227 aa11.57□□□□□ -0.56
CLCN6-201ENST00000312413 NHP2Q9NX24 153 aaKnown RBP11.57□□□□□ -0.56
CLCN6-201ENST00000312413 SNRNP200O75643 2136 aaKnown RBP11.57□□□□□ -0.56
CLCN6-201ENST00000312413 DOCK1Q14185 1865 aa11.57□□□□□ -0.56
CLCN6-201ENST00000312413 MUC21A0A0G2JKD1 596 aa11.57□□□□□ -0.56
CLCN6-201ENST00000312413 MUC21A0A140T8X8 626 aa11.57□□□□□ -0.56
CLCN6-201ENST00000312413 MUC21Q5SSG8 566 aa11.57□□□□□ -0.56
CLCN6-201ENST00000312413 FER1L6-AS1Q8NA97 138 aa11.57□□□□□ -0.56
CLCN6-201ENST00000312413 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.57□□□□□ -0.56
CLCN6-201ENST00000312413 DUX5Q96PT3 197 aa11.57□□□□□ -0.56
CLCN6-201ENST00000312413 FNDC4Q9H6D8 234 aaPredicted RBP11.57□□□□□ -0.56
CLCN6-201ENST00000312413 PGPEP1Q9NXJ5 209 aa11.57□□□□□ -0.56
CLCN6-201ENST00000312413 SPTA1P02549 2419 aa11.57□□□□□ -0.56
CLCN6-201ENST00000312413 IGHV3OR16-13A0A075B7E8 117 aa11.57□□□□□ -0.56
CLCN6-201ENST00000312413 IGHV3-74A0A0B4J1X5 117 aa11.57□□□□□ -0.56
CLCN6-201ENST00000312413 H3BRM9 83 aa11.57□□□□□ -0.56
CLCN6-201ENST00000312413 CCL20P78556 96 aa11.57□□□□□ -0.56
CLCN6-201ENST00000312413 PNKDQ8N490 385 aa11.57□□□□□ -0.56
CLCN6-201ENST00000312413 CACNG8Q8WXS5 425 aa11.57□□□□□ -0.56
CLCN6-201ENST00000312413 C2orf88Q9BSF0 95 aa11.57□□□□□ -0.56
CLCN6-201ENST00000312413 ZNF646O15015 1829 aaPredicted RBP11.56□□□□□ -0.56
CLCN6-201ENST00000312413 NDUFA3O95167 84 aa11.56□□□□□ -0.56
CLCN6-201ENST00000312413 CFHR5Q9BXR6 569 aa11.56□□□□□ -0.56
CLCN6-201ENST00000312413 ZNFX1Q9P2E3 1918 aaKnown RBP11.56□□□□□ -0.56
CLCN6-201ENST00000312413 F8VVB4 439 aa11.56□□□□□ -0.56
CLCN6-201ENST00000312413 F8VWA3 439 aa11.56□□□□□ -0.56
CLCN6-201ENST00000312413 SMRP1Q8NCR6 262 aa11.56□□□□□ -0.56
CLCN6-201ENST00000312413 LDLRAD2Q5SZI1 272 aa11.56□□□□□ -0.56
CLCN6-201ENST00000312413 ADAMTS7Q9UKP4 1686 aa11.56□□□□□ -0.56
CLCN6-201ENST00000312413 FGF16O43320 207 aa11.56□□□□□ -0.56
CLCN6-201ENST00000312413 TEX29Q8N6K0 151 aa11.56□□□□□ -0.56
CLCN6-201ENST00000312413 TMEM101Q96IK0 257 aa11.56□□□□□ -0.56
CLCN6-201ENST00000312413 LOC105371242A0A075B767 164 aa11.56□□□□□ -0.56
CLCN6-201ENST00000312413 IGKV3-20P01619 116 aa11.56□□□□□ -0.56
CLCN6-201ENST00000312413 C1QTNF9P0C862 333 aa11.56□□□□□ -0.56
CLCN6-201ENST00000312413 SCARF2Q96GP6 870 aaPredicted RBP11.56□□□□□ -0.56
CLCN6-201ENST00000312413 OR5AN1Q8NGI8 311 aa11.55□□□□□ -0.56
CLCN6-201ENST00000312413 SIGMAR1Q99720 223 aa11.55□□□□□ -0.56
CLCN6-201ENST00000312413 ZNF815PA8K554 130 aa11.55□□□□□ -0.56
CLCN6-201ENST00000312413 LY6G6FQ5SQ64 297 aa11.55□□□□□ -0.56
CLCN6-201ENST00000312413 ACP7Q6ZNF0 438 aa11.55□□□□□ -0.56
CLCN6-201ENST00000312413 GDF15Q99988 308 aa11.55□□□□□ -0.56
CLCN6-201ENST00000312413 RNASE7Q9H1E1 156 aaKnown RBP11.55□□□□□ -0.56
CLCN6-201ENST00000312413 COX6A1P12074 109 aa11.55□□□□□ -0.56
CLCN6-201ENST00000312413 HIST1H2BLQ99880 126 aa11.55□□□□□ -0.56
CLCN6-201ENST00000312413 UNC13CQ8NB66 2214 aa11.55□□□□□ -0.56
CLCN6-201ENST00000312413 LAMB2P55268 1798 aa11.55□□□□□ -0.56
CLCN6-201ENST00000312413 A0A1W2PRS3 328 aa11.55□□□□□ -0.56
CLCN6-201ENST00000312413 NDUFS8O00217 210 aa11.55□□□□□ -0.56
CLCN6-201ENST00000312413 HEPN1Q6WQI6 88 aa11.55□□□□□ -0.56
CLCN6-201ENST00000312413 CTSBP07858 339 aa11.54□□□□□ -0.56
CLCN6-201ENST00000312413 LEPP41159 167 aa11.54□□□□□ -0.56
CLCN6-201ENST00000312413 ANAPC13Q9BS18 74 aa11.54□□□□□ -0.56
CLCN6-201ENST00000312413 FOXD3Q9UJU5 478 aaPredicted RBP11.54□□□□□ -0.56
CLCN6-201ENST00000312413 MIA3Q5JRA6 1907 aa11.54□□□□□ -0.56
CLCN6-201ENST00000312413 RNASEH2CQ8TDP1 164 aaKnown RBP11.54□□□□□ -0.56
CLCN6-201ENST00000312413 Q9H3A6 140 aa11.54□□□□□ -0.56
CLCN6-201ENST00000312413 TRBV7-9A0A0J9YWB2 115 aa11.54□□□□□ -0.56
CLCN6-201ENST00000312413 GREM1O60565 184 aa11.54□□□□□ -0.56
CLCN6-201ENST00000312413 OSTCQ9NRP0 149 aa11.54□□□□□ -0.56
CLCN6-201ENST00000312413 FOXA2Q9Y261 457 aaPredicted RBP11.54□□□□□ -0.56
CLCN6-201ENST00000312413 SIPA1L3O60292 1781 aaPredicted RBP11.54□□□□□ -0.56
CLCN6-201ENST00000312413 IGHV1-69-2A0A0G2JMI3 117 aa11.54□□□□□ -0.56
CLCN6-201ENST00000312413 TIMM23BQ5SRD1 257 aa11.54□□□□□ -0.56
CLCN6-201ENST00000312413 ORAOV1Q8WV07 137 aa11.54□□□□□ -0.56
CLCN6-201ENST00000312413 C18orf12Q96KH6 178 aa11.54□□□□□ -0.56
CLCN6-201ENST00000312413 RNF115Q9Y4L5 304 aa11.54□□□□□ -0.56
CLCN6-201ENST00000312413 TMEM262E9PQX1 116 aa11.54□□□□□ -0.56
CLCN6-201ENST00000312413 PCOLCEQ15113 449 aa11.54□□□□□ -0.56
CLCN6-201ENST00000312413 CDCP2Q5VXM1 449 aa11.54□□□□□ -0.56
CLCN6-201ENST00000312413 NR2C2APQ86WQ0 139 aa11.54□□□□□ -0.56
CLCN6-201ENST00000312413 OR2K2Q8NGT1 345 aa11.54□□□□□ -0.56
CLCN6-201ENST00000312413 IGFBP3P17936 291 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms