RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 ATXN7L3Q14CW9 347 aaPredicted RBP6.68□□□□□ -1.34
CHD6-201ENST00000309279 OXA1LQ15070 435 aa6.68□□□□□ -1.34
CHD6-201ENST00000309279 OR10J3Q5JRS4 329 aa6.68□□□□□ -1.34
CHD6-201ENST00000309279 SLC35E4Q6ICL7 350 aa6.68□□□□□ -1.34
CHD6-201ENST00000309279 C9orf62Q8N4C0 152 aa6.68□□□□□ -1.34
CHD6-201ENST00000309279 PIP4P2Q8N4L2 257 aa6.68□□□□□ -1.34
CHD6-201ENST00000309279 TEX29Q8N6K0 151 aa6.68□□□□□ -1.34
CHD6-201ENST00000309279 TPRX1Q8N7U7 411 aa6.68□□□□□ -1.34
CHD6-201ENST00000309279 OR51S1Q8NGJ8 323 aa6.68□□□□□ -1.34
CHD6-201ENST00000309279 Q8WTZ3 238 aa6.68□□□□□ -1.34
CHD6-201ENST00000309279 TMEM170AQ8WVE7 144 aa6.68□□□□□ -1.34
CHD6-201ENST00000309279 TMEM37Q8WXS4 190 aa6.68□□□□□ -1.34
CHD6-201ENST00000309279 UPRTQ96BW1 309 aa6.68□□□□□ -1.34
CHD6-201ENST00000309279 ISOC1Q96CN7 298 aa6.68□□□□□ -1.34
CHD6-201ENST00000309279 KCTD12Q96CX2 325 aaKnown RBP6.68□□□□□ -1.34
CHD6-201ENST00000309279 UHRF2Q96PU4 802 aa6.68□□□□□ -1.34
CHD6-201ENST00000309279 NEDD4LQ96PU5 975 aa6.68□□□□□ -1.34
CHD6-201ENST00000309279 PECRQ9BY49 303 aa6.68□□□□□ -1.34
CHD6-201ENST00000309279 RBM38Q9H0Z9 239 aaKnown RBP6.68□□□□□ -1.34
CHD6-201ENST00000309279 DCSTAMPQ9H295 470 aa6.68□□□□□ -1.34
CHD6-201ENST00000309279 PSG8Q9UQ74 426 aa6.68□□□□□ -1.34
CHD6-201ENST00000309279 TCF19Q9Y242 345 aa6.68□□□□□ -1.34
CHD6-201ENST00000309279 FBXO7Q9Y3I1 522 aa6.68□□□□□ -1.34
CHD6-201ENST00000309279 ETV7Q9Y603 341 aa6.68□□□□□ -1.34
CHD6-201ENST00000309279 CENPVL3A0A0U1RRI6 287 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 MEIOCA2RUB1 952 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 C17orf98A8MV24 154 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 MPTX1A8MV57 137 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 H3BMQ9 156 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 SOCS1O15524 211 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 SSNA1O43805 119 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 FSHBP01225 129 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 RBP4P02753 201 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 ZNF728P0DKX0 622 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 PRTN3P24158 256 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 KIR2DS4P43632 304 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 RORCP51449 518 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 TCL1AP56279 114 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 RAB25P57735 213 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 ZNF415Q09FC8 603 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 FFAR4Q5NUL3 377 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 ZNF497Q6ZNH5 498 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 C6orf201Q7Z4U5 140 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 CCDC190Q86UF4 302 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 COMMD7Q86VX2 200 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 CMTM4Q8IZR5 234 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 TBX15Q96SF7 602 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 ATP5SQ99766 215 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 SULT4A1Q9BR01 284 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 FAAP24Q9BTP7 215 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 LINC00574Q9H8X3 128 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 RETNQ9HD89 108 aa6.67□□□□□ -1.34
CHD6-201ENST00000309279 MEIKINA0A087WXM9 373 aa6.66□□□□□ -1.34
CHD6-201ENST00000309279 TRGV10A0A0A0MS01 117 aa6.66□□□□□ -1.34
CHD6-201ENST00000309279 TMEM30CPA0ZSE6 113 aa6.66□□□□□ -1.34
CHD6-201ENST00000309279 H3BTX0 84 aa6.66□□□□□ -1.34
CHD6-201ENST00000309279 AP4M1O00189 453 aa6.66□□□□□ -1.34
CHD6-201ENST00000309279 ARPC1BO15143 372 aaKnown RBP6.66□□□□□ -1.34
CHD6-201ENST00000309279 CRLF1O75462 422 aa6.66□□□□□ -1.34
CHD6-201ENST00000309279 CCL3L1P16619 93 aa6.66□□□□□ -1.34
CHD6-201ENST00000309279 SNRPEP62304 92 aaKnown RBP6.66□□□□□ -1.34
CHD6-201ENST00000309279 TMEM128Q5BJH2 165 aa6.66□□□□□ -1.34
CHD6-201ENST00000309279 KLF17Q5JT82 389 aaPredicted RBP6.66□□□□□ -1.34
CHD6-201ENST00000309279 Q6ZTK2 550 aa6.66□□□□□ -1.34
CHD6-201ENST00000309279 MOB3BQ86TA1 216 aa6.66□□□□□ -1.34
CHD6-201ENST00000309279 C12orf45Q8N5I9 185 aaPredicted RBP6.66□□□□□ -1.34
CHD6-201ENST00000309279 GDPD1Q8N9F7 314 aa6.66□□□□□ -1.34
CHD6-201ENST00000309279 OR10R2Q8NGX6 335 aa6.66□□□□□ -1.34
CHD6-201ENST00000309279 DYRK2Q92630 601 aa6.66□□□□□ -1.34
CHD6-201ENST00000309279 SLC25A38Q96DW6 304 aa6.66□□□□□ -1.34
CHD6-201ENST00000309279 ARHGAP5-AS1Q96IT6 56 aa6.66□□□□□ -1.34
CHD6-201ENST00000309279 CYYR1Q96J86 154 aa6.66□□□□□ -1.34
CHD6-201ENST00000309279 ZNF714Q96N38 554 aa6.66□□□□□ -1.34
CHD6-201ENST00000309279 ABCG5Q9H222 651 aa6.66□□□□□ -1.34
CHD6-201ENST00000309279 TRBV6-6A0A0A6YYG2 114 aa6.65□□□□□ -1.34
CHD6-201ENST00000309279 UBE2QL1A1L167 161 aa6.65□□□□□ -1.34
CHD6-201ENST00000309279 SLC17A3O00476 420 aa6.65□□□□□ -1.34
CHD6-201ENST00000309279 NAPSAO96009 420 aa6.65□□□□□ -1.34
CHD6-201ENST00000309279 IFNA17P01571 189 aa6.65□□□□□ -1.34
CHD6-201ENST00000309279 GIPP09681 153 aaPredicted RBP6.65□□□□□ -1.34
CHD6-201ENST00000309279 HOXB4P17483 251 aaPredicted RBP6.65□□□□□ -1.34
CHD6-201ENST00000309279 RPL13AP40429 203 aaKnown RBP6.65□□□□□ -1.34
CHD6-201ENST00000309279 OR2F1Q13607 317 aa6.65□□□□□ -1.34
CHD6-201ENST00000309279 C17orf58Q2M2W7 97 aa6.65□□□□□ -1.34
CHD6-201ENST00000309279 C2orf68Q2NKX9 166 aa6.65□□□□□ -1.34
CHD6-201ENST00000309279 HEPN1Q6WQI6 88 aa6.65□□□□□ -1.34
CHD6-201ENST00000309279 PQLC2Q6ZP29 291 aa6.65□□□□□ -1.34
CHD6-201ENST00000309279 VMO1Q7Z5L0 202 aa6.65□□□□□ -1.34
CHD6-201ENST00000309279 OR10G9Q8NGN4 311 aa6.65□□□□□ -1.34
CHD6-201ENST00000309279 OR13A1Q8NGR1 328 aa6.65□□□□□ -1.34
CHD6-201ENST00000309279 KIRREL1Q96J84 757 aa6.65□□□□□ -1.34
CHD6-201ENST00000309279 P2RX4Q99571 388 aa6.65□□□□□ -1.34
CHD6-201ENST00000309279 ATG5Q9H1Y0 275 aa6.65□□□□□ -1.34
CHD6-201ENST00000309279 SPANXA1Q9NS26 97 aa6.65□□□□□ -1.34
CHD6-201ENST00000309279 MBNL3Q9NUK0 354 aaKnown RBP6.65□□□□□ -1.34
CHD6-201ENST00000309279 SIGLEC9Q9Y336 463 aa6.65□□□□□ -1.34
CHD6-201ENST00000309279 K7ERU9 68 aa6.65□□□□□ -1.35
CHD6-201ENST00000309279 MFNGO00587 321 aa6.65□□□□□ -1.35
CHD6-201ENST00000309279 ORC5O43913 435 aa6.65□□□□□ -1.35
CHD6-201ENST00000309279 IGHV1-8P0DP01 117 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms