RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 FAM58AQ8N1B3 248 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 OR10A7Q8NGE5 316 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 FGFBP3Q8TAT2 258 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 OR5P3Q8WZ94 311 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 ACY3Q96HD9 319 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 RAX2Q96IS3 184 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 POM121L2Q96KW2 1035 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 ALKBH3Q96Q83 286 aaPredicted RBP4.02□□□□□ -1.77
CKS1B-201ENST00000308987 TXNDC17Q9BRA2 123 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 MRPL37Q9BZE1 423 aaKnown RBP4.02□□□□□ -1.77
CKS1B-201ENST00000308987 WDR61Q9GZS3 305 aaKnown RBP4.02□□□□□ -1.77
CKS1B-201ENST00000308987 CHODLQ9H9P2 273 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 CDH20Q9HBT6 801 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 MANBALQ9NQG1 85 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 RPRMQ9NS64 109 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 UFSP2Q9NUQ7 469 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 PSENENQ9NZ42 101 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 MTCH1Q9NZJ7 389 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 WIPI2Q9Y4P8 454 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 KMT2CQ8NEZ4 4911 aaKnown RBP4.02□□□□□ -1.77
CKS1B-201ENST00000308987 TRAV24A0A0B4J272 114 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 CTXND1A0A1B0GTU2 59 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 SMCO3A2RU48 225 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 ANKRD30BLA7E2S9 258 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 ZNF727A8MUV8 499 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 TSTD3H0UI37 97 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 CYB5BO43169 146 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 LYZL6O75951 148 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 KBTBD11O94819 623 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 GCGP01275 180 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 TRGC2P03986 189 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 TYMSP04818 313 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 IGKV2-30P06310 120 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 PFN1P07737 140 aaKnown RBP4.01□□□□□ -1.77
CKS1B-201ENST00000308987 TRGC1P0CF51 173 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 TUBG1P23258 451 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 CEACAM6P40199 344 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 PSMB3P49720 205 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 GPM6AP51674 278 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 RAB11AP62491 216 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 RUNX1Q01196 453 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 JOSD1Q15040 202 aaPredicted RBP4.01□□□□□ -1.77
CKS1B-201ENST00000308987 PDCD1Q15116 288 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 TMEM241Q24JQ0 296 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 WDR25Q64LD2 544 aaPredicted RBP4.01□□□□□ -1.77
CKS1B-201ENST00000308987 OR2T2Q6IF00 324 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 Q6P435 159 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 TMEM14EPQ6UXP3 125 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 ZNF497Q6ZNH5 498 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 BHLHA15Q7RTS1 189 aaPredicted RBP4.01□□□□□ -1.77
CKS1B-201ENST00000308987 TMEM217Q8N7C4 229 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 WDR31Q8NA23 367 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 ZNF383Q8NA42 475 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 OR10D4PQ8NGN7 298 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 NEK7Q8TDX7 302 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 C10orf105Q8TEF2 133 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 ABHD5Q8WTS1 349 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 TAF15Q92804 592 aaKnown RBP eCLIP4.01□□□□□ -1.77
CKS1B-201ENST00000308987 RAB24Q969Q5 203 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 NOL4LQ96MY1 436 aaPredicted RBP4.01□□□□□ -1.77
CKS1B-201ENST00000308987 CIB3Q96Q77 187 aaPredicted RBP4.01□□□□□ -1.77
CKS1B-201ENST00000308987 IMMP2LQ96T52 175 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 TMEM147Q9BVK8 224 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 PRRG4Q9BZD6 226 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 BCL2L14Q9BZR8 327 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 ACTR3CQ9C0K3 210 aaPredicted RBP4.01□□□□□ -1.77
CKS1B-201ENST00000308987 FGF23Q9GZV9 251 aaPredicted RBP4.01□□□□□ -1.77
CKS1B-201ENST00000308987 OR51I2Q9H344 312 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 TUBG2Q9NRH3 451 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 SLC39A9Q9NUM3 307 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 TMEM160Q9NX00 188 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 GNG13Q9P2W3 67 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 HSPB7Q9UBY9 170 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 OR14J1Q9UGF5 321 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 POLDIP2Q9Y2S7 368 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 NBEAL2Q6ZNJ1 2754 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 DOCK11Q5JSL3 2073 aa4.01□□□□□ -1.77
CKS1B-201ENST00000308987 DNAH9Q9NYC9 4486 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 TGIF2-C20orf24A0A0A6YYL0 155 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 IGHV4-61A0A0C4DH41 118 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 A0A0G2JRQ6 117 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 A0A1B0GV50 99 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 A0A1W2PR80 420 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 C5orf49A4QMS7 147 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 MAP1LC3B2A6NCE7 125 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 FAM90A9PA6NNJ1 464 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 CEBPZOSA8MTT3 80 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 VWC2LB2RUY7 222 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 H7BYZ3 331 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 SH2D1BO14796 132 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 GGCTO75223 188 aaKnown RBP4□□□□□ -1.77
CKS1B-201ENST00000308987 ZNF737O75373 536 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 IGKV1-39P01597 117 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 IGKV1-5P01602 117 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 IGKV1D-39P04432 117 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 METTL15P1P0C7V9 234 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 P0C879 139 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 PATE4P0C8F1 98 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 PSG2P11465 335 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 SELEP16581 610 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms