RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 MDFIC2A0A1B0GVS7 189 aa12.42□□□□□ -0.42
CSDC2-201ENST00000306149 ACTL6BO94805 426 aa12.42□□□□□ -0.42
CSDC2-201ENST00000306149 CA2P00918 260 aa12.42□□□□□ -0.42
CSDC2-201ENST00000306149 LHBP01229 141 aa12.42□□□□□ -0.42
CSDC2-201ENST00000306149 IL6RP08887 468 aaPredicted RBP12.42□□□□□ -0.42
CSDC2-201ENST00000306149 CGB3P0DN86 165 aa12.42□□□□□ -0.42
CSDC2-201ENST00000306149 CGB7P0DN87 165 aa12.42□□□□□ -0.42
CSDC2-201ENST00000306149 FAM216BQ8N7L0 139 aa12.42□□□□□ -0.42
CSDC2-201ENST00000306149 OR4S2Q8NH73 311 aa12.42□□□□□ -0.42
CSDC2-201ENST00000306149 FAM215AQ9Y5M1 114 aa12.42□□□□□ -0.42
CSDC2-201ENST00000306149 MBD3L4A6NDZ8 208 aaPredicted RBP12.42□□□□□ -0.42
CSDC2-201ENST00000306149 MBD3L3A6NE82 208 aaPredicted RBP12.42□□□□□ -0.42
CSDC2-201ENST00000306149 MBD3L5A6NJ08 208 aaPredicted RBP12.42□□□□□ -0.42
CSDC2-201ENST00000306149 CASP6P55212 293 aa12.42□□□□□ -0.42
CSDC2-201ENST00000306149 MRPS11P82912 194 aaKnown RBP12.42□□□□□ -0.42
CSDC2-201ENST00000306149 TCF23Q7RTU1 214 aa12.42□□□□□ -0.42
CSDC2-201ENST00000306149 SGMS2Q8NHU3 365 aa12.42□□□□□ -0.42
CSDC2-201ENST00000306149 MBD3L2Q8NHZ7 208 aaPredicted RBP12.42□□□□□ -0.42
CSDC2-201ENST00000306149 MISP3Q96FF7 219 aa12.42□□□□□ -0.42
CSDC2-201ENST00000306149 C15orf61A6NNL5 157 aa12.41□□□□□ -0.42
CSDC2-201ENST00000306149 NPY1RP25929 384 aa12.41□□□□□ -0.42
CSDC2-201ENST00000306149 GLRXP35754 106 aa12.41□□□□□ -0.42
CSDC2-201ENST00000306149 CFHR2P36980 270 aa12.41□□□□□ -0.42
CSDC2-201ENST00000306149 FAM27E3Q08E93 113 aa12.41□□□□□ -0.42
CSDC2-201ENST00000306149 EFNB3Q15768 340 aa12.41□□□□□ -0.42
CSDC2-201ENST00000306149 STPG3Q8N7X2 389 aa12.41□□□□□ -0.42
CSDC2-201ENST00000306149 OCC1Q8TAD7 63 aa12.41□□□□□ -0.42
CSDC2-201ENST00000306149 NPVFQ9HCQ7 196 aa12.41□□□□□ -0.42
CSDC2-201ENST00000306149 GCM1Q9NP62 436 aa12.41□□□□□ -0.42
CSDC2-201ENST00000306149 ZGRF1Q86YA3 2104 aa12.41□□□□□ -0.42
CSDC2-201ENST00000306149 TRGV8A0A0C4DH27 118 aa12.41□□□□□ -0.42
CSDC2-201ENST00000306149 KBTBD11-OT1A0A1B0GTJ5 212 aa12.41□□□□□ -0.42
CSDC2-201ENST00000306149 IGFBP2P18065 325 aa12.41□□□□□ -0.42
CSDC2-201ENST00000306149 ZADH2Q8N4Q0 377 aa12.41□□□□□ -0.42
CSDC2-201ENST00000306149 SLC24A4Q8NFF2 622 aa12.41□□□□□ -0.42
CSDC2-201ENST00000306149 LSM4Q9Y4Z0 139 aaKnown RBP12.41□□□□□ -0.42
CSDC2-201ENST00000306149 TANC2Q9HCD6 1990 aa12.41□□□□□ -0.42
CSDC2-201ENST00000306149 IGKV1-16P04430 117 aa12.41□□□□□ -0.42
CSDC2-201ENST00000306149 SNRPCP09234 159 aaKnown RBP12.41□□□□□ -0.42
CSDC2-201ENST00000306149 OR4A8P0C604 315 aa12.41□□□□□ -0.42
CSDC2-201ENST00000306149 KIR2DS2P43631 304 aa12.41□□□□□ -0.42
CSDC2-201ENST00000306149 TIMM23BQ5SRD1 257 aa12.41□□□□□ -0.42
CSDC2-201ENST00000306149 ZCCHC24Q8N2G6 241 aaKnown RBP12.41□□□□□ -0.42
CSDC2-201ENST00000306149 RAI1Q7Z5J4 1906 aaPredicted RBP12.4□□□□□ -0.42
CSDC2-201ENST00000306149 K7EM74 188 aa12.4□□□□□ -0.42
CSDC2-201ENST00000306149 GATA2P23769 480 aaPredicted RBP12.4□□□□□ -0.42
CSDC2-201ENST00000306149 TIMP3P35625 211 aa12.4□□□□□ -0.42
CSDC2-201ENST00000306149 RAB4BP61018 213 aa12.4□□□□□ -0.42
CSDC2-201ENST00000306149 YPEL3P61236 119 aaPredicted RBP12.4□□□□□ -0.42
CSDC2-201ENST00000306149 HSPE1P61604 102 aaKnown RBP12.4□□□□□ -0.42
CSDC2-201ENST00000306149 TEPPQ6URK8 271 aa12.4□□□□□ -0.42
CSDC2-201ENST00000306149 OR4P4Q8NGL7 312 aa12.4□□□□□ -0.42
CSDC2-201ENST00000306149 IDI2-AS1Q9NZ38 188 aa12.4□□□□□ -0.42
CSDC2-201ENST00000306149 DYSFO75923 2080 aa12.4□□□□□ -0.42
CSDC2-201ENST00000306149 TRAV9-1A0A075B6T8 112 aa12.4□□□□□ -0.43
CSDC2-201ENST00000306149 TNFAIP6P98066 277 aaPredicted RBP12.4□□□□□ -0.43
CSDC2-201ENST00000306149 MLANAQ16655 118 aa12.4□□□□□ -0.43
CSDC2-201ENST00000306149 TEX38Q6PEX7 206 aa12.4□□□□□ -0.43
CSDC2-201ENST00000306149 ZCCHC14Q8WYQ9 949 aaKnown RBP12.4□□□□□ -0.43
CSDC2-201ENST00000306149 RND1Q92730 232 aa12.4□□□□□ -0.43
CSDC2-201ENST00000306149 FKBP11Q9NYL4 201 aa12.4□□□□□ -0.43
CSDC2-201ENST00000306149 TPRP12270 2363 aaKnown RBP12.39□□□□□ -0.43
CSDC2-201ENST00000306149 PLXNB1O43157 2135 aa12.39□□□□□ -0.43
CSDC2-201ENST00000306149 TRGV10A0A0A0MS01 117 aa12.39□□□□□ -0.43
CSDC2-201ENST00000306149 IGHV1-46P01743 117 aa12.39□□□□□ -0.43
CSDC2-201ENST00000306149 GCHFRP30047 84 aa12.39□□□□□ -0.43
CSDC2-201ENST00000306149 RPL31P62899 125 aaKnown RBP12.39□□□□□ -0.43
CSDC2-201ENST00000306149 LRFN3Q9BTN0 628 aa12.39□□□□□ -0.43
CSDC2-201ENST00000306149 ENY2Q9NPA8 101 aa12.39□□□□□ -0.43
CSDC2-201ENST00000306149 TMEM14BQ9NUH8 114 aa12.39□□□□□ -0.43
CSDC2-201ENST00000306149 RNF7Q9UBF6 113 aa12.39□□□□□ -0.43
CSDC2-201ENST00000306149 POLEQ07864 2286 aa12.39□□□□□ -0.43
CSDC2-201ENST00000306149 SRRM4A7MD48 611 aaKnown RBP12.39□□□□□ -0.43
CSDC2-201ENST00000306149 SLC17A3O00476 420 aa12.39□□□□□ -0.43
CSDC2-201ENST00000306149 RAB7AP51149 207 aa12.39□□□□□ -0.43
CSDC2-201ENST00000306149 HLA-DRB5Q30154 266 aa12.39□□□□□ -0.43
CSDC2-201ENST00000306149 TMEM256Q8N2U0 113 aa12.39□□□□□ -0.43
CSDC2-201ENST00000306149 OR10G8Q8NGN5 311 aa12.39□□□□□ -0.43
CSDC2-201ENST00000306149 OR51B2Q9Y5P1 312 aa12.39□□□□□ -0.43
CSDC2-201ENST00000306149 BSNQ9UPA5 3926 aa12.38□□□□□ -0.43
CSDC2-201ENST00000306149 ADMP35318 185 aa12.38□□□□□ -0.43
CSDC2-201ENST00000306149 CCL8P80075 99 aa12.38□□□□□ -0.43
CSDC2-201ENST00000306149 MIR17HGQ75NE6 70 aa12.38□□□□□ -0.43
CSDC2-201ENST00000306149 C1orf174Q8IYL3 243 aa12.38□□□□□ -0.43
CSDC2-201ENST00000306149 FAM169BQ8N8A8 192 aa12.38□□□□□ -0.43
CSDC2-201ENST00000306149 C11orf52Q96A22 123 aa12.38□□□□□ -0.43
CSDC2-201ENST00000306149 GAFA1Q96PS6 74 aa12.38□□□□□ -0.43
CSDC2-201ENST00000306149 NAV3Q8IVL0 2385 aa12.38□□□□□ -0.43
CSDC2-201ENST00000306149 KIR2DL5BA0A0G2JN68 375 aa12.38□□□□□ -0.43
CSDC2-201ENST00000306149 KIR2DL5BA0A0G2JPC4 375 aa12.38□□□□□ -0.43
CSDC2-201ENST00000306149 NUPR1O60356 82 aa12.38□□□□□ -0.43
CSDC2-201ENST00000306149 SELENOTP62341 195 aa12.38□□□□□ -0.43
CSDC2-201ENST00000306149 USF2Q15853 346 aaPredicted RBP12.38□□□□□ -0.43
CSDC2-201ENST00000306149 KIR2DL5AQ8N109 375 aa12.38□□□□□ -0.43
CSDC2-201ENST00000306149 IGLV3-9A0A075B6K5 115 aa12.37□□□□□ -0.43
CSDC2-201ENST00000306149 J3QR06 171 aa12.37□□□□□ -0.43
CSDC2-201ENST00000306149 FOXA2Q9Y261 457 aaPredicted RBP12.37□□□□□ -0.43
CSDC2-201ENST00000306149 LY96Q9Y6Y9 160 aa12.37□□□□□ -0.43
CSDC2-201ENST00000306149 K7EN84 100 aa12.37□□□□□ -0.43
CSDC2-201ENST00000306149 RHOBP62745 196 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms