RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 EVI2AP22794 236 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 GCSAMQ8N6F7 178 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 FMC1Q96HJ9 113 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 GTSF1LQ9H1H1 148 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 RPP21Q9H633 154 aaKnown RBP11.48□□□□□ -0.57
TRIM56-201ENST00000306085 PLSCR4Q9NRQ2 329 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 COL16A1Q07092 1604 aaPredicted RBP11.48□□□□□ -0.57
TRIM56-201ENST00000306085 LRP10Q7Z4F1 713 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 UBE2DNLQ8IWF7 75 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 RASL10BQ96S79 203 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 LAMTOR2Q9Y2Q5 125 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 HIGD1CA8MV81 97 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 NPIPB11E5RHQ5 1161 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 LINC01565O15544 149 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 NMBP08949 121 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 ATP5J2P56134 94 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 APCDD1LQ8NCL9 501 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 GLMPQ8WWB7 406 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 CD7P09564 240 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 ZNF79Q15937 498 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 Q6ZS52 159 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 OR10W1Q8NGF6 305 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 OR4X2Q8NGF9 303 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 USF3Q68DE3 2245 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 GTF3AQ92664 365 aaKnown RBP11.48□□□□□ -0.57
TRIM56-201ENST00000306085 C19orf24Q9BVV8 132 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 SELENOKQ9Y6D0 94 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 TSC2P49815 1807 aa11.47□□□□□ -0.57
TRIM56-201ENST00000306085 IGKV1D-42A0A075B6H8 117 aa11.47□□□□□ -0.57
TRIM56-201ENST00000306085 CEACAM21Q3KPI0 293 aa11.47□□□□□ -0.57
TRIM56-201ENST00000306085 FGFRL1Q8N441 504 aa11.47□□□□□ -0.57
TRIM56-201ENST00000306085 MARS2Q96GW9 593 aaKnown RBP11.47□□□□□ -0.57
TRIM56-201ENST00000306085 PGFP49763 221 aa11.47□□□□□ -0.57
TRIM56-201ENST00000306085 GAGE2AQ6NT46 116 aa11.47□□□□□ -0.57
TRIM56-201ENST00000306085 MPV17P39210 176 aa11.47□□□□□ -0.57
TRIM56-201ENST00000306085 EGR1P18146 543 aa11.47□□□□□ -0.57
TRIM56-201ENST00000306085 EFNB1P98172 346 aa11.47□□□□□ -0.57
TRIM56-201ENST00000306085 ZNF660Q6AZW8 331 aaPredicted RBP11.47□□□□□ -0.57
TRIM56-201ENST00000306085 DNM1P46Q6ZS02 220 aa11.47□□□□□ -0.57
TRIM56-201ENST00000306085 HIST1H2BAQ96A08 127 aa11.47□□□□□ -0.57
TRIM56-201ENST00000306085 PCSK4Q6UW60 755 aa11.47□□□□□ -0.57
TRIM56-201ENST00000306085 TMEM30AQ9NV96 361 aa11.47□□□□□ -0.57
TRIM56-201ENST00000306085 TRBV5-4A0A0C4DH59 114 aa11.47□□□□□ -0.57
TRIM56-201ENST00000306085 A0A1B0GW15 77 aa11.47□□□□□ -0.57
TRIM56-201ENST00000306085 FAM208BQ5VWN6 2430 aa11.47□□□□□ -0.57
TRIM56-201ENST00000306085 PAX4O43316 350 aa11.47□□□□□ -0.57
TRIM56-201ENST00000306085 ST20Q9HBF5 79 aa11.47□□□□□ -0.57
TRIM56-201ENST00000306085 CCL3P10147 92 aa11.47□□□□□ -0.57
TRIM56-201ENST00000306085 ESDP10768 282 aa11.47□□□□□ -0.57
TRIM56-201ENST00000306085 SCN7AQ01118 1682 aa11.46□□□□□ -0.57
TRIM56-201ENST00000306085 RBMY1FQ15415 496 aaKnown RBP11.46□□□□□ -0.57
TRIM56-201ENST00000306085 OR9G4Q8NGQ1 327 aa11.46□□□□□ -0.57
TRIM56-201ENST00000306085 CHTOPQ9Y3Y2 248 aaKnown RBP11.46□□□□□ -0.57
TRIM56-201ENST00000306085 SELENOHQ8IZQ5 122 aaKnown RBP11.46□□□□□ -0.57
TRIM56-201ENST00000306085 FER1L6-AS1Q8NA97 138 aa11.46□□□□□ -0.57
TRIM56-201ENST00000306085 PNKDQ8N490 385 aa11.46□□□□□ -0.57
TRIM56-201ENST00000306085 RGPD3A6NKT7 1758 aaPredicted RBP11.46□□□□□ -0.57
TRIM56-201ENST00000306085 CA7P43166 264 aa11.46□□□□□ -0.57
TRIM56-201ENST00000306085 ERG28Q9UKR5 140 aa11.46□□□□□ -0.57
TRIM56-201ENST00000306085 IGHV3OR16-8A0A075B7F1 116 aa11.46□□□□□ -0.57
TRIM56-201ENST00000306085 SCO2A0A1W2PP80 73 aa11.46□□□□□ -0.57
TRIM56-201ENST00000306085 GFRA3O60609 400 aa11.46□□□□□ -0.57
TRIM56-201ENST00000306085 HSPE1P61604 102 aaKnown RBP11.46□□□□□ -0.57
TRIM56-201ENST00000306085 ZNF826PQ6ZT77 177 aa11.46□□□□□ -0.58
TRIM56-201ENST00000306085 ITLN1Q8WWA0 313 aa11.46□□□□□ -0.58
TRIM56-201ENST00000306085 ZNF479Q96JC4 524 aa11.46□□□□□ -0.58
TRIM56-201ENST00000306085 LOC105371242A0A075B767 164 aa11.46□□□□□ -0.58
TRIM56-201ENST00000306085 A6NNC1 897 aa11.46□□□□□ -0.58
TRIM56-201ENST00000306085 MPTX1A8MV57 137 aa11.46□□□□□ -0.58
TRIM56-201ENST00000306085 BTAF1O14981 1849 aa11.46□□□□□ -0.58
TRIM56-201ENST00000306085 DANCRP0C864 163 aa11.46□□□□□ -0.58
TRIM56-201ENST00000306085 LOXL4Q96JB6 756 aa11.46□□□□□ -0.58
TRIM56-201ENST00000306085 MGST3O14880 152 aa11.45□□□□□ -0.58
TRIM56-201ENST00000306085 IL36BQ9NZH7 164 aa11.45□□□□□ -0.58
TRIM56-201ENST00000306085 TMEM196Q5HYL7 178 aa11.45□□□□□ -0.58
TRIM56-201ENST00000306085 IGHV1OR21-1A0A087WYE8 117 aa11.45□□□□□ -0.58
TRIM56-201ENST00000306085 PGLYRP1O75594 196 aaPredicted RBP11.45□□□□□ -0.58
TRIM56-201ENST00000306085 CGAP01215 116 aa11.45□□□□□ -0.58
TRIM56-201ENST00000306085 GPX4P36969 197 aaPredicted RBP11.45□□□□□ -0.58
TRIM56-201ENST00000306085 TMPRSS3P57727 454 aa11.45□□□□□ -0.58
TRIM56-201ENST00000306085 ABHD12Q8N2K0 398 aa11.45□□□□□ -0.58
TRIM56-201ENST00000306085 GLRXP35754 106 aa11.45□□□□□ -0.58
TRIM56-201ENST00000306085 ZNF146Q15072 292 aa11.45□□□□□ -0.58
TRIM56-201ENST00000306085 C9orf153Q5TBE3 101 aa11.45□□□□□ -0.58
TRIM56-201ENST00000306085 PLA2G10O15496 165 aa11.45□□□□□ -0.58
TRIM56-201ENST00000306085 PTPRFP10586 1907 aa11.45□□□□□ -0.58
TRIM56-201ENST00000306085 EDIL3O43854 480 aa11.45□□□□□ -0.58
TRIM56-201ENST00000306085 CELA2BP08218 269 aaPredicted RBP11.45□□□□□ -0.58
TRIM56-201ENST00000306085 TEX45Q8NA69 505 aa11.45□□□□□ -0.58
TRIM56-201ENST00000306085 IDI2-AS1Q9NZ38 188 aa11.45□□□□□ -0.58
TRIM56-201ENST00000306085 FOXA2Q9Y261 457 aaPredicted RBP11.45□□□□□ -0.58
TRIM56-201ENST00000306085 DSCAML1Q8TD84 2053 aa11.45□□□□□ -0.58
TRIM56-201ENST00000306085 ATG4DQ86TL0 474 aaPredicted RBP11.45□□□□□ -0.58
TRIM56-201ENST00000306085 NPIPB3Q92617 1050 aa11.45□□□□□ -0.58
TRIM56-201ENST00000306085 FGF12P61328 243 aa11.45□□□□□ -0.58
TRIM56-201ENST00000306085 CRYGNQ8WXF5 182 aa11.45□□□□□ -0.58
TRIM56-201ENST00000306085 PAX1P15863 534 aa11.44□□□□□ -0.58
TRIM56-201ENST00000306085 C2orf82Q6UX34 121 aa11.44□□□□□ -0.58
TRIM56-201ENST00000306085 ZNF729A6NN14 1252 aaPredicted RBP11.44□□□□□ -0.58
TRIM56-201ENST00000306085 PRDM13Q9H4Q3 707 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms