RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 F5H697 171 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 RAB5BP61020 215 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 TMEM187Q14656 261 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 DEFB121Q5J5C9 76 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 TEX45Q8NA69 505 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 FAM216AQ8WUB2 273 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 C18orf12Q96KH6 178 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 IGHV3OR16-12A0A075B7B8 117 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 IGHV3OR16-13A0A075B7E8 117 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 IGHV3-74A0A0B4J1X5 117 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 HELTA6NFD8 242 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 IL4P05112 153 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 UBE2E1P51965 193 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 DHRS11Q6UWP2 260 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 TMEM252Q8N6L7 170 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 PAXXQ9BUH6 204 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 RSPO3Q9BXY4 272 aaPredicted RBP7.64□□□□□ -1.19
PTPRE-202ENST00000306042 WNT10AQ9GZT5 417 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 PXMP4Q9Y6I8 212 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 TRAV41A0A0B4J266 112 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 ZNF737O75373 536 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 RPL7P18124 248 aaKnown RBP7.64□□□□□ -1.19
PTPRE-202ENST00000306042 M6PRP20645 277 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 FGF8P55075 233 aaPredicted RBP7.64□□□□□ -1.19
PTPRE-202ENST00000306042 RND3P61587 244 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 ZNF90Q03938 601 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 RUSC1-AS1Q66K80 236 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 NAV2Q8IVL1 2488 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 IGHV1-69DA0A0B4J2H0 117 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 BUB1B-PAK6H3BSN5 160 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 IGHV1-69P01742 117 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 CTRB1P17538 263 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 ZP3P21754 424 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 CTRB2Q6GPI1 263 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 GNG4P50150 75 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 ERVFC1-1P60608 527 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 KIAA0141Q14154 515 aaPredicted RBP7.63□□□□□ -1.19
PTPRE-202ENST00000306042 HMSDA8MTL9 139 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 MYOD1P15172 320 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 TMEM177Q53S58 311 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 TMEM78Q5T7P6 136 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 ZNF324BQ6AW86 544 aaPredicted RBP7.63□□□□□ -1.19
PTPRE-202ENST00000306042 DDB2Q92466 427 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 SOSTQ9BQB4 213 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 IGKV1D-13A0A0B4J2D9 117 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 S100A8P05109 93 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 OR9G9P0C7N8 305 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 IGKV1-13P0DP09 117 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 CXCL3P19876 107 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 UCP1P25874 307 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 RANP62826 216 aaKnown RBP7.63□□□□□ -1.19
PTPRE-202ENST00000306042 RHOGP84095 191 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 Q6P435 159 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 COQ2Q96H96 371 aa7.63□□□□□ -1.19
PTPRE-202ENST00000306042 FOXA2Q9Y261 457 aaPredicted RBP7.63□□□□□ -1.19
PTPRE-202ENST00000306042 UPK2O00526 184 aa7.62□□□□□ -1.19
PTPRE-202ENST00000306042 RBFOX2O43251 390 aaKnown RBP eCLIP7.62□□□□□ -1.19
PTPRE-202ENST00000306042 ZNF207O43670 478 aaKnown RBP7.62□□□□□ -1.19
PTPRE-202ENST00000306042 SNRPCP09234 159 aaKnown RBP7.62□□□□□ -1.19
PTPRE-202ENST00000306042 DUTP33316 252 aaKnown RBP7.62□□□□□ -1.19
PTPRE-202ENST00000306042 NHLH2Q02577 135 aa7.62□□□□□ -1.19
PTPRE-202ENST00000306042 IGHV3-49A0A0A0MS15 119 aa7.62□□□□□ -1.19
PTPRE-202ENST00000306042 C1orf196B1AJZ1 125 aa7.62□□□□□ -1.19
PTPRE-202ENST00000306042 RRN3P1Q2M238 152 aa7.62□□□□□ -1.19
PTPRE-202ENST00000306042 TUSC1Q2TAM9 212 aa7.62□□□□□ -1.19
PTPRE-202ENST00000306042 SLC25A48Q6ZT89 311 aaKnown RBP7.62□□□□□ -1.19
PTPRE-202ENST00000306042 IL17RELQ6ZVW7 336 aa7.62□□□□□ -1.19
PTPRE-202ENST00000306042 PLCE1Q9P212 2302 aa7.62□□□□□ -1.19
PTPRE-202ENST00000306042 KRBOX1C9JBD0 128 aa7.62□□□□□ -1.19
PTPRE-202ENST00000306042 CXorf1O96002 111 aa7.62□□□□□ -1.19
PTPRE-202ENST00000306042 CD5P06127 495 aa7.62□□□□□ -1.19
PTPRE-202ENST00000306042 CFHR2P36980 270 aa7.62□□□□□ -1.19
PTPRE-202ENST00000306042 RPS10P46783 165 aaKnown RBP7.62□□□□□ -1.19
PTPRE-202ENST00000306042 COMMD1Q8N668 190 aa7.62□□□□□ -1.19
PTPRE-202ENST00000306042 RNF166Q96A37 237 aaPredicted RBP7.62□□□□□ -1.19
PTPRE-202ENST00000306042 A0A0A6YYD4 124 aa7.62□□□□□ -1.19
PTPRE-202ENST00000306042 PITX3O75364 302 aa7.62□□□□□ -1.19
PTPRE-202ENST00000306042 IGHV4-39P01824 125 aa7.62□□□□□ -1.19
PTPRE-202ENST00000306042 TMEM41BQ5BJD5 291 aa7.62□□□□□ -1.19
PTPRE-202ENST00000306042 RNF5Q99942 180 aa7.62□□□□□ -1.19
PTPRE-202ENST00000306042 SRSF10O75494 262 aaKnown RBP7.61□□□□□ -1.19
PTPRE-202ENST00000306042 DEDDO75618 318 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 ORM1P02763 201 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 NR2C2APQ86WQ0 139 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 SAMD10Q9BYL1 202 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 IGHV4-30-2A0A087WSY4 118 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 SIAH2O43255 324 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 RAB4AP20338 218 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 TMEM249Q2WGJ8 235 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 SMIM8Q96KF7 97 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 DNAJC4Q9NNZ3 241 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 ZNF735P0CB33 412 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 ZNF343Q6P1L6 599 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 TEX38Q6PEX7 206 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 LDLRAD3Q86YD5 345 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 OR5AU1Q8NGC0 362 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 OR51G1Q8NGK1 321 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 IL17DQ8TAD2 202 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 GALNT14Q96FL9 552 aa7.61□□□□□ -1.19
PTPRE-202ENST00000306042 IFI27L2Q9H2X8 130 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms