RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 OR10G9Q8NGN4 311 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 OR10G7Q8NGN6 311 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 TMEM68Q96MH6 324 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 MGST2Q99735 147 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 TMPRSS5Q9H3S3 457 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 SLC25A22Q9H936 323 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 LSM4Q9Y4Z0 139 aaKnown RBP5.3□□□□□ -1.56
USP47-201ENST00000305481 PPIAL4CA0A0B4J2A2 164 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 C7orf77A4D0Y5 90 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 ZFP92A6NM28 416 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 YIF1AO95070 293 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 IFNA4P05014 189 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 PPIAL4GP0DN37 164 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 TMEM11P17152 192 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 DLK1P80370 383 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 BSXQ3C1V8 233 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 KHDC3LQ587J8 217 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 SOHLH1Q5JUK2 328 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 PDPNQ86YL7 162 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 LY6G5BQ8NDX9 201 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 OR4C13Q8NGP0 309 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 PCGF1Q9BSM1 259 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 ARHGAP32A7KAX9 2087 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 VPS13CQ709C8 3753 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 IGHV3-72A0A0B4J1Y9 119 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 SMCO3A2RU48 225 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 NDUFS7O75251 213 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 BCL2P10415 239 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 PMS2P11Q13670 270 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 AKIRIN2Q53H80 203 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 LDLRAD2Q5SZI1 272 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 TGIF2LXQ8IUE1 241 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 ZNF709Q8N972 641 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 RAB24Q969Q5 203 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 NEIL1Q96FI4 390 aaPredicted RBP5.29□□□□□ -1.56
USP47-201ENST00000305481 NDUFA4L2Q9NRX3 87 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 SLC39A9Q9NUM3 307 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 MIOXQ9UGB7 285 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 WASHC3Q9Y3C0 194 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 CSMD1Q96PZ7 3565 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 FLNCQ14315 2725 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 SNRNP70P08621 437 aaKnown RBP5.29□□□□□ -1.56
USP47-201ENST00000305481 RAB11AP62491 216 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 HLA-DRB5Q30154 266 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 MOB3BQ86TA1 216 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 OR8B3Q8NGG8 313 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 OR5B3Q8NH48 314 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 TMEM167AQ8TBQ9 72 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 NEU4Q8WWR8 484 aaPredicted RBP5.29□□□□□ -1.56
USP47-201ENST00000305481 OR8B2Q96RD0 313 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 GGTLC1Q9BX51 225 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 PLEKHA3Q9HB20 300 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 TPSG1Q9NRR2 321 aa5.29□□□□□ -1.56
USP47-201ENST00000305481 CTXND1A0A1B0GTU2 59 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 C17orf112F2Z3M2 114 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 BUB1B-PAK6H3BSN5 160 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 MPDU1O75352 247 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 MBP02144 154 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 AGAP20933 346 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 CDKN1AP38936 164 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 CEBPGP53567 150 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 SSTP61278 116 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 RPL8P62917 257 aaKnown RBP5.28□□□□□ -1.56
USP47-201ENST00000305481 MLANAQ16655 118 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 C10orf55Q5SWW7 151 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 GATAD1Q8WUU5 269 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 TNFRSF14Q92956 283 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 FAM122AQ96E09 287 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 ENY2Q9NPA8 101 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 RPS10P5Q9NQ39 176 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 FKBP11Q9NYL4 201 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 PUS1Q9Y606 427 aaKnown RBP eCLIP5.28□□□□□ -1.56
USP47-201ENST00000305481 COLCA2A8K830 154 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 H3BQ15 152 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 LY6LH3BQJ8 138 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 M0R036 132 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 RBP4P02753 201 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 RNASE2P10153 161 aaKnown RBP5.28□□□□□ -1.56
USP47-201ENST00000305481 OPRK1P41145 380 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 FAM90A2PQ658T7 463 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 BEND2Q8NDZ0 799 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 OR4P4Q8NGL7 312 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 RAB1CQ92928 201 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 CLEC7AQ9BXN2 247 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 ZNF430Q9H8G1 570 aaPredicted RBP5.28□□□□□ -1.56
USP47-201ENST00000305481 NPVFQ9HCQ7 196 aa5.28□□□□□ -1.56
USP47-201ENST00000305481 IGKV1OR2-108A0A075B7D4 117 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 SEC14L6B5MCN3 397 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 PLXNB1O43157 2135 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 IGFBP2P18065 325 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 USF1P22415 310 aaPredicted RBP5.27□□□□□ -1.57
USP47-201ENST00000305481 COX7A1P24310 79 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 CNTFRP26992 372 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 MC5RP33032 325 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 PRRX1P54821 245 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 CD81P60033 236 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 WT1-ASQ06250 92 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 C2orf83Q53S99 150 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 MIC13Q5XKP0 118 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 ACTR3CQ9C0K3 210 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms