RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 LOC285556D6RIA3 1793 aa10.83□□□□□ -0.68
COL3A1-201ENST00000304636 TNS1Q9HBL0 1735 aaKnown RBP10.83□□□□□ -0.68
COL3A1-201ENST00000304636 HIST1H1AQ02539 215 aaPredicted RBP10.83□□□□□ -0.68
COL3A1-201ENST00000304636 ZNF837Q96EG3 531 aaPredicted RBP10.83□□□□□ -0.68
COL3A1-201ENST00000304636 ZNF71Q9NQZ8 489 aaPredicted RBP10.83□□□□□ -0.68
COL3A1-201ENST00000304636 TRAV9-2A0A087WT02 112 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 RFPL3SP0C7P2 107 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 LGALS3P17931 250 aaKnown RBP10.82□□□□□ -0.68
COL3A1-201ENST00000304636 SRSF7Q16629 238 aaKnown RBP eCLIP10.82□□□□□ -0.68
COL3A1-201ENST00000304636 SYT8Q8NBV8 401 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 OR13A1Q8NGR1 328 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 NEUROG1Q92886 237 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 EAF1Q96JC9 268 aaPredicted RBP10.82□□□□□ -0.68
COL3A1-201ENST00000304636 HTN1P15515 57 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 Q6AWC8 147 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 FAM53AQ6NSI3 398 aaPredicted RBP10.82□□□□□ -0.68
COL3A1-201ENST00000304636 ST6GALNAC3Q8NDV1 305 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 CHD5Q8TDI0 1954 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 FAM106CPP0CH98 169 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 TTC32Q5I0X7 151 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 ZNRF1Q8ND25 227 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 PHLDA3Q9Y5J5 127 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 A0A1W2PS18 150 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 OR11H12B2RN74 326 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 TNFSF13O75888 250 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 GPR6P46095 362 aaPredicted RBP10.82□□□□□ -0.68
COL3A1-201ENST00000304636 LOXL3P58215 753 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 SMAGPQ0VAQ4 97 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 Q6ZT83 130 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 BEND2Q8NDZ0 799 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 OR11H1Q8NG94 326 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 OR11H2Q8NH07 326 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 GDF15Q99988 308 aa10.82□□□□□ -0.68
COL3A1-201ENST00000304636 MAP1BP46821 2468 aaKnown RBP10.81□□□□□ -0.68
COL3A1-201ENST00000304636 C19orf67A6NJJ6 358 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 IGHV3-48P01763 117 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 NUTF2P61970 127 aaKnown RBP10.81□□□□□ -0.68
COL3A1-201ENST00000304636 ADIPOQQ15848 244 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 IGLV3-32A0A0A0MS00 114 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 HIGD1CA8MV81 97 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 NAPSAO96009 420 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 LYL1P12980 280 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 TMEM144Q7Z5S9 345 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 LURAP1LQ8IV03 231 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 TTC9CQ8N5M4 171 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 PLPPR1Q8TBJ4 325 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 RNASE7Q9H1E1 156 aaKnown RBP10.81□□□□□ -0.68
COL3A1-201ENST00000304636 ZNF703Q9H7S9 590 aaPredicted RBP10.81□□□□□ -0.68
COL3A1-201ENST00000304636 SPCS1Q9Y6A9 102 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 FBLN7Q53RD9 439 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 PYY3Q5JQD4 70 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 PEAR1Q5VY43 1037 aaPredicted RBP10.81□□□□□ -0.68
COL3A1-201ENST00000304636 SHISA5Q8N114 240 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 TRBV20OR9-2A0A075B6H5 130 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 ADCYAP1P18509 176 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 DNM1P46Q6ZS02 220 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 OR52E5Q8NH55 327 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 WBP1Q96G27 269 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 TIMP4Q99727 224 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 VSIRQ9H7M9 311 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 DOCK4Q8N1I0 1966 aa10.81□□□□□ -0.68
COL3A1-201ENST00000304636 TM4SF5O14894 197 aa10.8□□□□□ -0.68
COL3A1-201ENST00000304636 GPR183P32249 361 aa10.8□□□□□ -0.68
COL3A1-201ENST00000304636 AMMECR1LQ6DCA0 310 aa10.8□□□□□ -0.68
COL3A1-201ENST00000304636 TEX38Q6PEX7 206 aa10.8□□□□□ -0.68
COL3A1-201ENST00000304636 PPP1R32Q7Z5V6 425 aa10.8□□□□□ -0.68
COL3A1-201ENST00000304636 RNASEH2CQ8TDP1 164 aaKnown RBP10.8□□□□□ -0.68
COL3A1-201ENST00000304636 MTCL1Q9Y4B5 1905 aaKnown RBP10.8□□□□□ -0.68
COL3A1-201ENST00000304636 UNC13CQ8NB66 2214 aa10.8□□□□□ -0.68
COL3A1-201ENST00000304636 ACSF3Q4G176 576 aaPredicted RBP10.8□□□□□ -0.68
COL3A1-201ENST00000304636 C1orf194Q5T5A4 169 aa10.8□□□□□ -0.68
COL3A1-201ENST00000304636 WFDC3Q8IUB2 231 aa10.8□□□□□ -0.68
COL3A1-201ENST00000304636 OCC1Q8TAD7 63 aa10.8□□□□□ -0.68
COL3A1-201ENST00000304636 TMEM160Q9NX00 188 aa10.8□□□□□ -0.68
COL3A1-201ENST00000304636 CGB1A6NKQ9 187 aa10.8□□□□□ -0.68
COL3A1-201ENST00000304636 CD55P08174 381 aa10.8□□□□□ -0.68
COL3A1-201ENST00000304636 ZNF497Q6ZNH5 498 aa10.8□□□□□ -0.68
COL3A1-201ENST00000304636 GPR82Q96P67 336 aa10.8□□□□□ -0.68
COL3A1-201ENST00000304636 SNAI2O43623 268 aa10.8□□□□□ -0.68
COL3A1-201ENST00000304636 DLX6P56179 175 aa10.8□□□□□ -0.68
COL3A1-201ENST00000304636 FOXL1Q12952 345 aa10.8□□□□□ -0.68
COL3A1-201ENST00000304636 PILRBQ9UKJ0 227 aa10.8□□□□□ -0.68
COL3A1-201ENST00000304636 GFRA1P56159 465 aa10.8□□□□□ -0.68
COL3A1-201ENST00000304636 SS18L1O75177 396 aaPredicted RBP10.79□□□□□ -0.68
COL3A1-201ENST00000304636 ATP5LO75964 103 aa10.79□□□□□ -0.68
COL3A1-201ENST00000304636 EMP1P54849 157 aa10.79□□□□□ -0.68
COL3A1-201ENST00000304636 FAM90A1Q86YD7 464 aa10.79□□□□□ -0.68
COL3A1-201ENST00000304636 MRPS18CQ9Y3D5 142 aaKnown RBP10.79□□□□□ -0.68
COL3A1-201ENST00000304636 MYOFQ9NZM1 2061 aa10.79□□□□□ -0.68
COL3A1-201ENST00000304636 SCN2AQ99250 2005 aa10.79□□□□□ -0.68
COL3A1-201ENST00000304636 TRAV8-6A0A0B4J262 113 aa10.79□□□□□ -0.68
COL3A1-201ENST00000304636 TM4SF20Q53R12 229 aa10.79□□□□□ -0.68
COL3A1-201ENST00000304636 JKAMPQ9P055 326 aa10.79□□□□□ -0.68
COL3A1-201ENST00000304636 KBTBD11-OT1A0A1B0GTJ5 212 aa10.79□□□□□ -0.68
COL3A1-201ENST00000304636 NPIPB6E9PJ23 425 aa10.79□□□□□ -0.68
COL3A1-201ENST00000304636 UNQ5815/PRO19632Q6UWF5 114 aa10.79□□□□□ -0.68
COL3A1-201ENST00000304636 C2orf88Q9BSF0 95 aa10.79□□□□□ -0.68
COL3A1-201ENST00000304636 CLEC7AQ9BXN2 247 aa10.79□□□□□ -0.68
COL3A1-201ENST00000304636 WDR83OSQ9Y284 106 aa10.79□□□□□ -0.68
COL3A1-201ENST00000304636 IGLV3-12A0A075B6K2 115 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms