RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 APOA1P02647 267 aa12.56□□□□□ -0.4
TRAPPC1-201ENST00000303731 PMP2P02689 132 aa12.56□□□□□ -0.4
TRAPPC1-201ENST00000303731 CLEC3BP05452 202 aa12.56□□□□□ -0.4
TRAPPC1-201ENST00000303731 LSM3P62310 102 aaKnown RBP12.56□□□□□ -0.4
TRAPPC1-201ENST00000303731 OR1L6Q8NGR2 347 aa12.56□□□□□ -0.4
TRAPPC1-201ENST00000303731 ZNF502Q8TBZ5 544 aa12.56□□□□□ -0.4
TRAPPC1-201ENST00000303731 LSM10Q969L4 123 aaKnown RBP12.56□□□□□ -0.4
TRAPPC1-201ENST00000303731 DGCR14Q96DF8 476 aaKnown RBP12.56□□□□□ -0.4
TRAPPC1-201ENST00000303731 SCPEP1Q9HB40 452 aa12.56□□□□□ -0.4
TRAPPC1-201ENST00000303731 FKBP11Q9NYL4 201 aa12.56□□□□□ -0.4
TRAPPC1-201ENST00000303731 UFC1Q9Y3C8 167 aa12.56□□□□□ -0.4
TRAPPC1-201ENST00000303731 CSMD3Q7Z407 3707 aa12.55□□□□□ -0.4
TRAPPC1-201ENST00000303731 TRAV25A0A0B4J276 109 aa12.55□□□□□ -0.4
TRAPPC1-201ENST00000303731 SNAPC5O75971 98 aa12.55□□□□□ -0.4
TRAPPC1-201ENST00000303731 SERPINE2P07093 398 aa12.55□□□□□ -0.4
TRAPPC1-201ENST00000303731 CD7P09564 240 aa12.55□□□□□ -0.4
TRAPPC1-201ENST00000303731 GPR183P32249 361 aa12.55□□□□□ -0.4
TRAPPC1-201ENST00000303731 HRH1P35367 487 aa12.55□□□□□ -0.4
TRAPPC1-201ENST00000303731 PLET1Q6UQ28 207 aa12.55□□□□□ -0.4
TRAPPC1-201ENST00000303731 IL17DQ8TAD2 202 aa12.55□□□□□ -0.4
TRAPPC1-201ENST00000303731 TSC22D3Q99576 134 aa12.55□□□□□ -0.4
TRAPPC1-201ENST00000303731 MRPL27Q9P0M9 148 aaKnown RBP12.55□□□□□ -0.4
TRAPPC1-201ENST00000303731 PRNDQ9UKY0 176 aa12.55□□□□□ -0.4
TRAPPC1-201ENST00000303731 S4R3C0 116 aa12.55□□□□□ -0.4
TRAPPC1-201ENST00000303731 TEX50A0A1B0GTY4 177 aa12.54□□□□□ -0.4
TRAPPC1-201ENST00000303731 OR13C7P0DN81 318 aa12.54□□□□□ -0.4
TRAPPC1-201ENST00000303731 LPAR6P43657 344 aa12.54□□□□□ -0.4
TRAPPC1-201ENST00000303731 TSPAN5P62079 268 aa12.54□□□□□ -0.4
TRAPPC1-201ENST00000303731 SPSB3Q6PJ21 355 aa12.54□□□□□ -0.4
TRAPPC1-201ENST00000303731 TMEM61Q8N0U2 210 aa12.54□□□□□ -0.4
TRAPPC1-201ENST00000303731 DEFB125Q8N687 156 aa12.54□□□□□ -0.4
TRAPPC1-201ENST00000303731 UXS1Q8NBZ7 420 aa12.54□□□□□ -0.4
TRAPPC1-201ENST00000303731 OR5B3Q8NH48 314 aa12.54□□□□□ -0.4
TRAPPC1-201ENST00000303731 GPX8Q8TED1 209 aa12.54□□□□□ -0.4
TRAPPC1-201ENST00000303731 FCAMRQ8WWV6 532 aa12.54□□□□□ -0.4
TRAPPC1-201ENST00000303731 WDR89Q96FK6 387 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC1-201ENST00000303731 TMEM56Q96MV1 263 aa12.54□□□□□ -0.4
TRAPPC1-201ENST00000303731 ZNF436Q9C0F3 470 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC1-201ENST00000303731 FXYD6Q9H0Q3 95 aa12.54□□□□□ -0.4
TRAPPC1-201ENST00000303731 HIPK2Q9H2X6 1198 aa12.54□□□□□ -0.4
TRAPPC1-201ENST00000303731 SRD5A3Q9H8P0 318 aa12.54□□□□□ -0.4
TRAPPC1-201ENST00000303731 NDUFA4L2Q9NRX3 87 aa12.54□□□□□ -0.4
TRAPPC1-201ENST00000303731 TGOLN2O43493 480 aa12.53□□□□□ -0.4
TRAPPC1-201ENST00000303731 KRASP01116 189 aa12.53□□□□□ -0.4
TRAPPC1-201ENST00000303731 C8orf88P0DMB2 117 aa12.53□□□□□ -0.4
TRAPPC1-201ENST00000303731 RCVRNP35243 200 aa12.53□□□□□ -0.4
TRAPPC1-201ENST00000303731 RBPMS2Q6ZRY4 209 aaKnown RBP12.53□□□□□ -0.4
TRAPPC1-201ENST00000303731 LYSMD2Q8IV50 215 aa12.53□□□□□ -0.4
TRAPPC1-201ENST00000303731 OR10W1Q8NGF6 305 aa12.53□□□□□ -0.4
TRAPPC1-201ENST00000303731 OR52B4Q8NGK2 314 aa12.53□□□□□ -0.4
TRAPPC1-201ENST00000303731 CACNG8Q8WXS5 425 aa12.53□□□□□ -0.4
TRAPPC1-201ENST00000303731 BSCL2Q96G97 398 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC1-201ENST00000303731 COMMD3Q9UBI1 195 aa12.53□□□□□ -0.4
TRAPPC1-201ENST00000303731 MLXQ9UH92 298 aa12.53□□□□□ -0.4
TRAPPC1-201ENST00000303731 OR51B2Q9Y5P1 312 aa12.53□□□□□ -0.4
TRAPPC1-201ENST00000303731 F11RQ9Y624 299 aaKnown RBP12.53□□□□□ -0.4
TRAPPC1-201ENST00000303731 EIF4EP06730 217 aaKnown RBP12.52□□□□□ -0.41
TRAPPC1-201ENST00000303731 RPA2P15927 270 aa12.52□□□□□ -0.41
TRAPPC1-201ENST00000303731 EDN2P20800 178 aa12.52□□□□□ -0.41
TRAPPC1-201ENST00000303731 HLA-DMAP28067 261 aa12.52□□□□□ -0.41
TRAPPC1-201ENST00000303731 WT1-ASQ06250 92 aa12.52□□□□□ -0.41
TRAPPC1-201ENST00000303731 SLC25A24Q6NUK1 477 aa12.52□□□□□ -0.41
TRAPPC1-201ENST00000303731 FUNDC2Q9BWH2 189 aa12.52□□□□□ -0.41
TRAPPC1-201ENST00000303731 GAR1Q9NY12 217 aaKnown RBP12.52□□□□□ -0.41
TRAPPC1-201ENST00000303731 TENM2Q9NT68 2774 aa12.52□□□□□ -0.41
TRAPPC1-201ENST00000303731 RBMY1BA6NDE4 496 aaKnown RBP12.51□□□□□ -0.41
TRAPPC1-201ENST00000303731 RBMY1EA6NEQ0 496 aaKnown RBP12.51□□□□□ -0.41
TRAPPC1-201ENST00000303731 RBMY1DP0C7P1 496 aaKnown RBP12.51□□□□□ -0.41
TRAPPC1-201ENST00000303731 G6PCP35575 357 aa12.51□□□□□ -0.41
TRAPPC1-201ENST00000303731 RORCP51449 518 aa12.51□□□□□ -0.41
TRAPPC1-201ENST00000303731 UCP3P55916 312 aa12.51□□□□□ -0.41
TRAPPC1-201ENST00000303731 ZNF585BQ52M93 769 aa12.51□□□□□ -0.41
TRAPPC1-201ENST00000303731 TM4SF20Q53R12 229 aa12.51□□□□□ -0.41
TRAPPC1-201ENST00000303731 ZFAND6Q6FIF0 208 aa12.51□□□□□ -0.41
TRAPPC1-201ENST00000303731 MZT2AQ6P582 158 aa12.51□□□□□ -0.41
TRAPPC1-201ENST00000303731 BTNL8Q6UX41 500 aa12.51□□□□□ -0.41
TRAPPC1-201ENST00000303731 UNQ9165/PRO28630Q6UXU0 137 aa12.51□□□□□ -0.41
TRAPPC1-201ENST00000303731 SLC38A6Q8IZM9 456 aa12.51□□□□□ -0.41
TRAPPC1-201ENST00000303731 TMEM190Q8WZ59 177 aa12.51□□□□□ -0.41
TRAPPC1-201ENST00000303731 AP3S1Q92572 193 aa12.51□□□□□ -0.41
TRAPPC1-201ENST00000303731 HINT2Q9BX68 163 aa12.51□□□□□ -0.41
TRAPPC1-201ENST00000303731 C5orf66Q9H5L9 145 aa12.51□□□□□ -0.41
TRAPPC1-201ENST00000303731 DAZ1Q9NQZ3 744 aaKnown RBP12.51□□□□□ -0.41
TRAPPC1-201ENST00000303731 TMEM14BQ9NUH8 114 aa12.51□□□□□ -0.41
TRAPPC1-201ENST00000303731 STARD9Q9P2P6 4700 aa12.5□□□□□ -0.41
TRAPPC1-201ENST00000303731 LCE6AA0A183 80 aa12.5□□□□□ -0.41
TRAPPC1-201ENST00000303731 C15orf61A6NNL5 157 aa12.5□□□□□ -0.41
TRAPPC1-201ENST00000303731 NDUFA4O00483 81 aa12.5□□□□□ -0.41
TRAPPC1-201ENST00000303731 VBP1P61758 197 aa12.5□□□□□ -0.41
TRAPPC1-201ENST00000303731 NCS1P62166 190 aa12.5□□□□□ -0.41
TRAPPC1-201ENST00000303731 SPAG8Q99932 426 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC1-201ENST00000303731 C21orf62Q9NYP8 219 aa12.5□□□□□ -0.41
TRAPPC1-201ENST00000303731 SACSQ9NZJ4 4579 aa12.5□□□□□ -0.41
TRAPPC1-201ENST00000303731 LYSTQ99698 3801 aa12.49□□□□□ -0.41
TRAPPC1-201ENST00000303731 OR2T8A6NH00 312 aa12.49□□□□□ -0.41
TRAPPC1-201ENST00000303731 PHLDA2Q53GA4 152 aa12.49□□□□□ -0.41
TRAPPC1-201ENST00000303731 LAMTOR1Q6IAA8 161 aa12.49□□□□□ -0.41
TRAPPC1-201ENST00000303731 TBC1D26Q86UD7 250 aa12.49□□□□□ -0.41
TRAPPC1-201ENST00000303731 SNX29P2Q8IUI4 249 aa12.49□□□□□ -0.41
TRAPPC1-201ENST00000303731 OR1P1Q8NH06 330 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms