RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 DOPEY2Q9Y3R5 2298 aa11.76□□□□□ -0.53
PRKCB-201ENST00000303531 APOBEC3AP31941 199 aaPredicted RBP11.76□□□□□ -0.53
PRKCB-201ENST00000303531 PRSS2P07478 247 aa11.76□□□□□ -0.53
PRKCB-201ENST00000303531 S4R3C0 116 aa11.76□□□□□ -0.53
PRKCB-201ENST00000303531 IGLV3-19P01714 112 aa11.76□□□□□ -0.53
PRKCB-201ENST00000303531 NBEAP1P0C6P0 100 aa11.76□□□□□ -0.53
PRKCB-201ENST00000303531 FBXL15Q9H469 300 aa11.76□□□□□ -0.53
PRKCB-201ENST00000303531 TRBV20OR9-2A0A075B6H5 130 aa11.76□□□□□ -0.53
PRKCB-201ENST00000303531 IGHV2OR16-5A0A0B4J2B6 119 aa11.76□□□□□ -0.53
PRKCB-201ENST00000303531 RAX2Q96IS3 184 aa11.76□□□□□ -0.53
PRKCB-201ENST00000303531 IMMP1LQ96LU5 166 aa11.76□□□□□ -0.53
PRKCB-201ENST00000303531 IL36BQ9NZH7 164 aa11.76□□□□□ -0.53
PRKCB-201ENST00000303531 ATP5G3P48201 142 aa11.75□□□□□ -0.53
PRKCB-201ENST00000303531 PQLC2LA1A4F0 135 aa11.75□□□□□ -0.53
PRKCB-201ENST00000303531 ZNF56Q15929 161 aa11.75□□□□□ -0.53
PRKCB-201ENST00000303531 SAPCD1Q5SSQ6 148 aa11.75□□□□□ -0.53
PRKCB-201ENST00000303531 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.75□□□□□ -0.53
PRKCB-201ENST00000303531 TM4SF5O14894 197 aa11.75□□□□□ -0.53
PRKCB-201ENST00000303531 CELA3BP08861 270 aa11.75□□□□□ -0.53
PRKCB-201ENST00000303531 ERASQ7Z444 233 aa11.75□□□□□ -0.53
PRKCB-201ENST00000303531 CLDND2Q8NHS1 167 aa11.75□□□□□ -0.53
PRKCB-201ENST00000303531 CHD5Q8TDI0 1954 aa11.75□□□□□ -0.53
PRKCB-201ENST00000303531 IGHV1-2P23083 117 aa11.75□□□□□ -0.53
PRKCB-201ENST00000303531 KBTBD11-OT1A0A1B0GTJ5 212 aa11.75□□□□□ -0.53
PRKCB-201ENST00000303531 HIST1H1AQ02539 215 aaPredicted RBP11.75□□□□□ -0.53
PRKCB-201ENST00000303531 IMMP2LQ96T52 175 aa11.75□□□□□ -0.53
PRKCB-201ENST00000303531 TP53BP1Q12888 1972 aaPredicted RBP11.75□□□□□ -0.53
PRKCB-201ENST00000303531 DPRXA6NFQ7 191 aa11.74□□□□□ -0.53
PRKCB-201ENST00000303531 ATRAIDQ6UW56 229 aa11.74□□□□□ -0.53
PRKCB-201ENST00000303531 RALGAPA2Q2PPJ7 1873 aa11.74□□□□□ -0.53
PRKCB-201ENST00000303531 WDYHV1Q96HA8 205 aa11.74□□□□□ -0.53
PRKCB-201ENST00000303531 MRPL13Q9BYD1 178 aaKnown RBP11.74□□□□□ -0.53
PRKCB-201ENST00000303531 MRPL14Q6P1L8 145 aaKnown RBP11.74□□□□□ -0.53
PRKCB-201ENST00000303531 C1orf162Q8NEQ5 155 aaPredicted RBP11.74□□□□□ -0.53
PRKCB-201ENST00000303531 DUX5Q96PT3 197 aa11.74□□□□□ -0.53
PRKCB-201ENST00000303531 PRR32B1ATL7 298 aa11.74□□□□□ -0.53
PRKCB-201ENST00000303531 UMODP07911 640 aa11.74□□□□□ -0.53
PRKCB-201ENST00000303531 PDLIM4P50479 330 aa11.74□□□□□ -0.53
PRKCB-201ENST00000303531 ZNF525Q8N782 197 aa11.74□□□□□ -0.53
PRKCB-201ENST00000303531 LYPD3O95274 346 aa11.74□□□□□ -0.53
PRKCB-201ENST00000303531 PEX7O00628 323 aa11.74□□□□□ -0.53
PRKCB-201ENST00000303531 FOXA2Q9Y261 457 aaPredicted RBP11.74□□□□□ -0.53
PRKCB-201ENST00000303531 IGHV3-66A0A0C4DH42 116 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 TSPOP30536 169 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 PLPPR1Q8TBJ4 325 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 KCNS1Q96KK3 526 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 RNF126Q9BV68 326 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 WNK3Q9BYP7 1800 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 IGHV3-49A0A0A0MS15 119 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 IGKV3-20P01619 116 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 C18orf12Q96KH6 178 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 KIR2DL4Q99706 377 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 TET1Q8NFU7 2136 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 WNT10AQ9GZT5 417 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 TBR1Q16650 682 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 FAM159AQ6UWV7 190 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 TMEM136Q6ZRR5 245 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 MRPL20Q9BYC9 149 aaKnown RBP11.73□□□□□ -0.53
PRKCB-201ENST00000303531 A0A1B0GV90 55 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 BSPH1Q075Z2 132 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 TEX45Q8NA69 505 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 SLC25A28Q96A46 364 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 LYZL4Q96KX0 146 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 FOXH1O75593 365 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 REC114Q7Z4M0 266 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 FLVCR1-AS1Q8TAF5 88 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 CNOT1A5YKK6 2376 aaKnown RBP11.73□□□□□ -0.53
PRKCB-201ENST00000303531 IQCF6A8MYZ5 107 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 CTAG1AP78358 180 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 MIR17HGQ75NE6 70 aa11.73□□□□□ -0.53
PRKCB-201ENST00000303531 IGKV1D-33P01593 117 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 IGKV1-33P01594 117 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 SNRPD3P62318 126 aaKnown RBP11.72□□□□□ -0.53
PRKCB-201ENST00000303531 IGKV1D-13A0A0B4J2D9 117 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 IGKV1-9A0A0C4DH69 117 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 J3QRE1 110 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 TRGV3P03979 118 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 IGKV1-13P0DP09 117 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 DPM3Q9P2X0 92 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 TBL2Q9Y4P3 447 aaKnown RBP11.72□□□□□ -0.53
PRKCB-201ENST00000303531 PDCD11Q14690 1871 aaKnown RBP11.72□□□□□ -0.53
PRKCB-201ENST00000303531 TRBV6-7A0A0A0MS04 114 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 LTBRP36941 435 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 WBP1Q96G27 269 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 CCL19Q99731 98 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 SDF2L1Q9HCN8 221 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 GATA2P23769 480 aaPredicted RBP11.72□□□□□ -0.53
PRKCB-201ENST00000303531 TNFSF10P50591 281 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 LY6G6FQ5SQ64 297 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 ZNF414Q96IQ9 312 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 SDK2Q58EX2 2172 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 TRAV24A0A0B4J272 114 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 ZNF883P0CG24 379 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 OR52E5Q8NH55 327 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 PMCHL2Q9BQD1 86 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 WDR82Q6UXN9 313 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 C18orf15Q96N68 181 aa11.72□□□□□ -0.53
PRKCB-201ENST00000303531 HAX1O00165 279 aa11.71□□□□□ -0.53
PRKCB-201ENST00000303531 TMEM160Q9NX00 188 aa11.71□□□□□ -0.53
PRKCB-201ENST00000303531 SCN8AQ9UQD0 1980 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms