RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 RAB24Q969Q5 203 aa15.72■□□□□ 0.11
HOXC4-201ENST00000303406 HINT2Q9BX68 163 aa15.72■□□□□ 0.11
HOXC4-201ENST00000303406 ZFP92A6NM28 416 aa15.71■□□□□ 0.11
HOXC4-201ENST00000303406 M0R036 132 aa15.71■□□□□ 0.11
HOXC4-201ENST00000303406 GOSR1O95249 250 aa15.71■□□□□ 0.11
HOXC4-201ENST00000303406 RNASE2P10153 161 aaKnown RBP15.71■□□□□ 0.11
HOXC4-201ENST00000303406 IGFBP2P18065 325 aa15.71■□□□□ 0.11
HOXC4-201ENST00000303406 ERHP84090 104 aaKnown RBP15.71■□□□□ 0.11
HOXC4-201ENST00000303406 SLC35E3Q7Z769 313 aa15.71■□□□□ 0.11
HOXC4-201ENST00000303406 C15orf54Q8N8G6 183 aa15.71■□□□□ 0.11
HOXC4-201ENST00000303406 CYB561D1Q8N8Q1 229 aa15.71■□□□□ 0.11
HOXC4-201ENST00000303406 SLC25A22Q9H936 323 aa15.71■□□□□ 0.11
HOXC4-201ENST00000303406 A6NNC1 897 aa15.7■□□□□ 0.1
HOXC4-201ENST00000303406 ATF4P18848 351 aaPredicted RBP15.7■□□□□ 0.1
HOXC4-201ENST00000303406 RPL29P47914 159 aaKnown RBP15.7■□□□□ 0.1
HOXC4-201ENST00000303406 UQCRFS1P47985 274 aa15.7■□□□□ 0.1
HOXC4-201ENST00000303406 C1orf159Q96HA4 380 aa15.7■□□□□ 0.1
HOXC4-201ENST00000303406 RNF5Q99942 180 aa15.7■□□□□ 0.1
HOXC4-201ENST00000303406 RPS10P5Q9NQ39 176 aa15.7■□□□□ 0.1
HOXC4-201ENST00000303406 PXMP4Q9Y6I8 212 aa15.7■□□□□ 0.1
HOXC4-201ENST00000303406 C22orf46C9J442 243 aa15.69■□□□□ 0.1
HOXC4-201ENST00000303406 YIF1AO95070 293 aa15.69■□□□□ 0.1
HOXC4-201ENST00000303406 SNRNP70P08621 437 aaKnown RBP15.69■□□□□ 0.1
HOXC4-201ENST00000303406 GPX4P36969 197 aaPredicted RBP15.69■□□□□ 0.1
HOXC4-201ENST00000303406 PSMB3P49720 205 aa15.69■□□□□ 0.1
HOXC4-201ENST00000303406 TMEM144Q7Z5S9 345 aa15.69■□□□□ 0.1
HOXC4-201ENST00000303406 OR4P4Q8NGL7 312 aa15.69■□□□□ 0.1
HOXC4-201ENST00000303406 CACNG8Q8WXS5 425 aa15.69■□□□□ 0.1
HOXC4-201ENST00000303406 IGHV1-3A0A0C4DH29 117 aa15.68■□□□□ 0.1
HOXC4-201ENST00000303406 A0A1W2PPR1 153 aa15.68■□□□□ 0.1
HOXC4-201ENST00000303406 H3BQ15 152 aa15.68■□□□□ 0.1
HOXC4-201ENST00000303406 LY6LH3BQJ8 138 aa15.68■□□□□ 0.1
HOXC4-201ENST00000303406 MAS1LP35410 378 aa15.68■□□□□ 0.1
HOXC4-201ENST00000303406 FAM90A2PQ658T7 463 aa15.68■□□□□ 0.1
HOXC4-201ENST00000303406 MRPL41Q8IXM3 137 aaKnown RBP15.68■□□□□ 0.1
HOXC4-201ENST00000303406 OR11H6Q8NGC7 330 aa15.68■□□□□ 0.1
HOXC4-201ENST00000303406 TVP23CQ96ET8 276 aa15.68■□□□□ 0.1
HOXC4-201ENST00000303406 NIPSNAP3BQ9BS92 247 aa15.68■□□□□ 0.1
HOXC4-201ENST00000303406 SSBP3Q9BWW4 388 aaPredicted RBP15.68■□□□□ 0.1
HOXC4-201ENST00000303406 ZNF430Q9H8G1 570 aaPredicted RBP15.68■□□□□ 0.1
HOXC4-201ENST00000303406 INSIG2Q9Y5U4 225 aa15.68■□□□□ 0.1
HOXC4-201ENST00000303406 A0A087WWC5 75 aa15.68■□□□□ 0.1
HOXC4-201ENST00000303406 TMEM250H0YL14 139 aa15.68■□□□□ 0.1
HOXC4-201ENST00000303406 CRYGBP07316 175 aa15.68■□□□□ 0.1
HOXC4-201ENST00000303406 MEF2BQ02080 365 aaPredicted RBP15.68■□□□□ 0.1
HOXC4-201ENST00000303406 PNRC1Q12796 327 aaPredicted RBP15.68■□□□□ 0.1
HOXC4-201ENST00000303406 HNF4GQ14541 408 aa15.68■□□□□ 0.1
HOXC4-201ENST00000303406 C1orf122Q6ZSJ8 110 aa15.68■□□□□ 0.1
HOXC4-201ENST00000303406 MMD2Q8IY49 270 aa15.68■□□□□ 0.1
HOXC4-201ENST00000303406 KIR3DL3Q8N743 410 aa15.68■□□□□ 0.1
HOXC4-201ENST00000303406 RNASEH2CQ8TDP1 164 aaKnown RBP15.68■□□□□ 0.1
HOXC4-201ENST00000303406 PUS1Q9Y606 427 aaKnown RBP eCLIP15.68■□□□□ 0.1
HOXC4-201ENST00000303406 LOC105371242A0A075B767 164 aa15.67■□□□□ 0.1
HOXC4-201ENST00000303406 LY6HO94772 140 aa15.67■□□□□ 0.1
HOXC4-201ENST00000303406 GPR6P46095 362 aaPredicted RBP15.67■□□□□ 0.1
HOXC4-201ENST00000303406 SUB1P53999 127 aaKnown RBP eCLIP15.67■□□□□ 0.1
HOXC4-201ENST00000303406 CD69Q07108 199 aa15.67■□□□□ 0.1
HOXC4-201ENST00000303406 ONECUT1Q9UBC0 465 aa15.67■□□□□ 0.1
HOXC4-201ENST00000303406 CACNA1AO00555 2505 aa15.67■□□□□ 0.1
HOXC4-201ENST00000303406 ATRXP46100 2492 aa15.66■□□□□ 0.1
HOXC4-201ENST00000303406 A0A1W2PPV4 95 aa15.66■□□□□ 0.1
HOXC4-201ENST00000303406 COLCA2A8K830 154 aa15.66■□□□□ 0.1
HOXC4-201ENST00000303406 B4DEV8 164 aa15.66■□□□□ 0.1
HOXC4-201ENST00000303406 OPN1MWP04001 364 aa15.66■□□□□ 0.1
HOXC4-201ENST00000303406 FBP1P09467 338 aa15.66■□□□□ 0.1
HOXC4-201ENST00000303406 OPN1MW2P0DN77 364 aa15.66■□□□□ 0.1
HOXC4-201ENST00000303406 OPN1MW3P0DN78 364 aa15.66■□□□□ 0.1
HOXC4-201ENST00000303406 EFNA4P52798 201 aa15.66■□□□□ 0.1
HOXC4-201ENST00000303406 B2MP61769 119 aa15.66■□□□□ 0.1
HOXC4-201ENST00000303406 PRR20EP86478 221 aa15.66■□□□□ 0.1
HOXC4-201ENST00000303406 PRR20CP86479 221 aa15.66■□□□□ 0.1
HOXC4-201ENST00000303406 PRR20DP86480 221 aa15.66■□□□□ 0.1
HOXC4-201ENST00000303406 PRR20BP86481 221 aa15.66■□□□□ 0.1
HOXC4-201ENST00000303406 PRR20AP86496 221 aa15.66■□□□□ 0.1
HOXC4-201ENST00000303406 MRGPRG-AS1Q2M3A8 158 aa15.66■□□□□ 0.1
HOXC4-201ENST00000303406 MIC13Q5XKP0 118 aa15.66■□□□□ 0.1
HOXC4-201ENST00000303406 RPEQ96AT9 228 aa15.66■□□□□ 0.1
HOXC4-201ENST00000303406 NCOR2Q9Y618 2525 aa15.66■□□□□ 0.1
HOXC4-201ENST00000303406 CGB1A6NKQ9 187 aa15.65■□□□□ 0.1
HOXC4-201ENST00000303406 SLC25A17O43808 307 aa15.65■□□□□ 0.1
HOXC4-201ENST00000303406 STAG3L2P0CL84 134 aa15.65■□□□□ 0.1
HOXC4-201ENST00000303406 STAG3L3P0CL85 134 aa15.65■□□□□ 0.1
HOXC4-201ENST00000303406 FOLR2P14207 255 aa15.65■□□□□ 0.1
HOXC4-201ENST00000303406 PRTN3P24158 256 aa15.65■□□□□ 0.1
HOXC4-201ENST00000303406 CD81P60033 236 aa15.65■□□□□ 0.1
HOXC4-201ENST00000303406 PRSS8Q16651 343 aa15.65■□□□□ 0.1
HOXC4-201ENST00000303406 PVRIGQ6DKI7 326 aa15.65■□□□□ 0.1
HOXC4-201ENST00000303406 PNKDQ8N490 385 aa15.65■□□□□ 0.1
HOXC4-201ENST00000303406 SLC35E1Q96K37 410 aa15.65■□□□□ 0.1
HOXC4-201ENST00000303406 TXNDC17Q9BRA2 123 aa15.65■□□□□ 0.1
HOXC4-201ENST00000303406 SLC45A2Q9UMX9 530 aa15.65■□□□□ 0.1
HOXC4-201ENST00000303406 ENSAO43768 121 aaKnown RBP15.64■□□□□ 0.09
HOXC4-201ENST00000303406 COX7A1P24310 79 aa15.64■□□□□ 0.09
HOXC4-201ENST00000303406 TPTE2P1Q5T6R2 138 aa15.64■□□□□ 0.09
HOXC4-201ENST00000303406 STPG3Q8N7X2 389 aa15.64■□□□□ 0.09
HOXC4-201ENST00000303406 ZNF114Q8NC26 417 aa15.64■□□□□ 0.09
HOXC4-201ENST00000303406 OR10W1Q8NGF6 305 aa15.64■□□□□ 0.09
HOXC4-201ENST00000303406 C20orf24Q9BUV8 137 aa15.64■□□□□ 0.09
HOXC4-201ENST00000303406 UBTD1Q9HAC8 227 aa15.64■□□□□ 0.09
HOXC4-201ENST00000303406 ODF3BA8MYP8 253 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms