RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 ST8SIA3O43173 380 aa11.95□□□□□ -0.5
UBXN1-202ENST00000301935 SIX6O95475 246 aa11.95□□□□□ -0.5
UBXN1-202ENST00000301935 IFNA17P01571 189 aa11.95□□□□□ -0.5
UBXN1-202ENST00000301935 IL15RAQ13261 267 aa11.95□□□□□ -0.5
UBXN1-202ENST00000301935 BEAN1Q3B7T3 259 aa11.95□□□□□ -0.5
UBXN1-202ENST00000301935 HSD17B13Q7Z5P4 300 aaPredicted RBP11.95□□□□□ -0.5
UBXN1-202ENST00000301935 C5orf56Q8N8D9 126 aa11.95□□□□□ -0.5
UBXN1-202ENST00000301935 HSPB7Q9UBY9 170 aa11.95□□□□□ -0.5
UBXN1-202ENST00000301935 TNCP24821 2201 aa11.95□□□□□ -0.5
UBXN1-202ENST00000301935 TRAV3A0A0B4J244 114 aa11.94□□□□□ -0.5
UBXN1-202ENST00000301935 A0A1W2PN81 502 aa11.94□□□□□ -0.5
UBXN1-202ENST00000301935 G3V4G9 280 aa11.94□□□□□ -0.5
UBXN1-202ENST00000301935 WRBO00258 174 aa11.94□□□□□ -0.5
UBXN1-202ENST00000301935 CNIH1O95406 144 aa11.94□□□□□ -0.5
UBXN1-202ENST00000301935 PSMB6P28072 239 aa11.94□□□□□ -0.5
UBXN1-202ENST00000301935 CHRNA7P36544 502 aa11.94□□□□□ -0.5
UBXN1-202ENST00000301935 TNFRSF9Q07011 255 aa11.94□□□□□ -0.5
UBXN1-202ENST00000301935 IZUMO4Q1ZYL8 232 aa11.94□□□□□ -0.5
UBXN1-202ENST00000301935 FBLN7Q53RD9 439 aa11.94□□□□□ -0.5
UBXN1-202ENST00000301935 TMEM219Q86XT9 240 aa11.94□□□□□ -0.5
UBXN1-202ENST00000301935 CIB3Q96Q77 187 aaPredicted RBP11.94□□□□□ -0.5
UBXN1-202ENST00000301935 CLCC1Q96S66 551 aa11.94□□□□□ -0.5
UBXN1-202ENST00000301935 NSG2Q9Y328 171 aa11.94□□□□□ -0.5
UBXN1-202ENST00000301935 TEX50A0A1B0GTY4 177 aa11.93□□□□□ -0.5
UBXN1-202ENST00000301935 PVALBP20472 110 aaPredicted RBP11.93□□□□□ -0.5
UBXN1-202ENST00000301935 RPL27AP46776 148 aaKnown RBP11.93□□□□□ -0.5
UBXN1-202ENST00000301935 ATP5IP56385 69 aaPredicted RBP11.93□□□□□ -0.5
UBXN1-202ENST00000301935 CD83Q01151 205 aa11.93□□□□□ -0.5
UBXN1-202ENST00000301935 TNXAQ16473 311 aa11.93□□□□□ -0.5
UBXN1-202ENST00000301935 PPP1R1CQ8WVI7 109 aa11.93□□□□□ -0.5
UBXN1-202ENST00000301935 TMEM68Q96MH6 324 aa11.93□□□□□ -0.5
UBXN1-202ENST00000301935 RAB40CQ96S21 281 aa11.93□□□□□ -0.5
UBXN1-202ENST00000301935 QTRT1Q9BXR0 403 aaKnown RBP11.93□□□□□ -0.5
UBXN1-202ENST00000301935 NPFFR1Q9GZQ6 430 aa11.93□□□□□ -0.5
UBXN1-202ENST00000301935 ENY2Q9NPA8 101 aa11.93□□□□□ -0.5
UBXN1-202ENST00000301935 INS-IGF2F8WCM5 200 aa11.92□□□□□ -0.5
UBXN1-202ENST00000301935 SYNGR2O43760 224 aa11.92□□□□□ -0.5
UBXN1-202ENST00000301935 CA2P00918 260 aa11.92□□□□□ -0.5
UBXN1-202ENST00000301935 MBPP02686 304 aaPredicted RBP11.92□□□□□ -0.5
UBXN1-202ENST00000301935 TAS2R30P59541 319 aa11.92□□□□□ -0.5
UBXN1-202ENST00000301935 OR2B8PP59922 312 aa11.92□□□□□ -0.5
UBXN1-202ENST00000301935 RPP30P78346 268 aaKnown RBP11.92□□□□□ -0.5
UBXN1-202ENST00000301935 CX3CL1P78423 397 aa11.92□□□□□ -0.5
UBXN1-202ENST00000301935 PRCDQ00LT1 54 aa11.92□□□□□ -0.5
UBXN1-202ENST00000301935 PJVKQ0ZLH3 352 aa11.92□□□□□ -0.5
UBXN1-202ENST00000301935 FXYD3Q14802 87 aa11.92□□□□□ -0.5
UBXN1-202ENST00000301935 MRGPRG-AS1Q2M3A8 158 aa11.92□□□□□ -0.5
UBXN1-202ENST00000301935 CXorf66Q5JRM2 361 aaPredicted RBP11.92□□□□□ -0.5
UBXN1-202ENST00000301935 KPRPQ5T749 579 aaPredicted RBP11.92□□□□□ -0.5
UBXN1-202ENST00000301935 SAMD5Q5TGI4 173 aa11.92□□□□□ -0.5
UBXN1-202ENST00000301935 TCTE3Q8IZS6 198 aa11.92□□□□□ -0.5
UBXN1-202ENST00000301935 PRSS22Q9GZN4 317 aa11.92□□□□□ -0.5
UBXN1-202ENST00000301935 HIPK2Q9H2X6 1198 aa11.92□□□□□ -0.5
UBXN1-202ENST00000301935 TPSG1Q9NRR2 321 aa11.92□□□□□ -0.5
UBXN1-202ENST00000301935 NDUFA4L2Q9NRX3 87 aa11.92□□□□□ -0.5
UBXN1-202ENST00000301935 CEBPZOSA8MTT3 80 aa11.91□□□□□ -0.5
UBXN1-202ENST00000301935 FCN1O00602 326 aa11.91□□□□□ -0.5
UBXN1-202ENST00000301935 PFDN1O60925 122 aa11.91□□□□□ -0.5
UBXN1-202ENST00000301935 OPN1MWP04001 364 aa11.91□□□□□ -0.5
UBXN1-202ENST00000301935 OPN1MW2P0DN77 364 aa11.91□□□□□ -0.5
UBXN1-202ENST00000301935 OPN1MW3P0DN78 364 aa11.91□□□□□ -0.5
UBXN1-202ENST00000301935 GNB1P62873 340 aa11.91□□□□□ -0.5
UBXN1-202ENST00000301935 TMEM267Q0VDI3 215 aaPredicted RBP11.91□□□□□ -0.5
UBXN1-202ENST00000301935 RAB32Q13637 225 aa11.91□□□□□ -0.5
UBXN1-202ENST00000301935 HIST2H2BDQ6DRA6 164 aa11.91□□□□□ -0.5
UBXN1-202ENST00000301935 OR2T35Q8NGX2 323 aa11.91□□□□□ -0.5
UBXN1-202ENST00000301935 THAP6Q8TBB0 222 aa11.91□□□□□ -0.5
UBXN1-202ENST00000301935 RBMXL1Q96E39 390 aaKnown RBP11.91□□□□□ -0.5
UBXN1-202ENST00000301935 ST6GAL2Q96JF0 529 aa11.91□□□□□ -0.5
UBXN1-202ENST00000301935 PLEKHA3Q9HB20 300 aa11.91□□□□□ -0.5
UBXN1-202ENST00000301935 ZNF580Q9UK33 172 aa11.91□□□□□ -0.5
UBXN1-202ENST00000301935 PLXNB1O43157 2135 aa11.9□□□□□ -0.5
UBXN1-202ENST00000301935 IGHV7-81A0A0B4J1V7 117 aa11.9□□□□□ -0.5
UBXN1-202ENST00000301935 CHST1O43916 411 aa11.9□□□□□ -0.5
UBXN1-202ENST00000301935 SCAF4O95104 1147 aaKnown RBP11.9□□□□□ -0.5
UBXN1-202ENST00000301935 MPC2O95563 127 aa11.9□□□□□ -0.5
UBXN1-202ENST00000301935 SCGB1D2O95969 90 aa11.9□□□□□ -0.5
UBXN1-202ENST00000301935 IGHG2P01859 326 aa11.9□□□□□ -0.5
UBXN1-202ENST00000301935 AMY1AP04745 511 aa11.9□□□□□ -0.5
UBXN1-202ENST00000301935 ERHP84090 104 aaKnown RBP11.9□□□□□ -0.5
UBXN1-202ENST00000301935 NOXA1Q86UR1 476 aa11.9□□□□□ -0.5
UBXN1-202ENST00000301935 DTD1Q8TEA8 209 aa11.9□□□□□ -0.5
UBXN1-202ENST00000301935 SRSF12Q8WXF0 261 aaKnown RBP11.9□□□□□ -0.5
UBXN1-202ENST00000301935 ARPC1AQ92747 370 aa11.9□□□□□ -0.5
UBXN1-202ENST00000301935 SMIM8Q96KF7 97 aa11.9□□□□□ -0.5
UBXN1-202ENST00000301935 NEURL2Q9BR09 285 aa11.9□□□□□ -0.5
UBXN1-202ENST00000301935 RBKSQ9H477 322 aa11.9□□□□□ -0.5
UBXN1-202ENST00000301935 RANGRFQ9HD47 186 aaPredicted RBP11.9□□□□□ -0.5
UBXN1-202ENST00000301935 E5RGE8 158 aa11.89□□□□□ -0.51
UBXN1-202ENST00000301935 K7EPK0 472 aa11.89□□□□□ -0.51
UBXN1-202ENST00000301935 L7N2F9 121 aa11.89□□□□□ -0.51
UBXN1-202ENST00000301935 DEDDO75618 318 aa11.89□□□□□ -0.51
UBXN1-202ENST00000301935 SLC25A4P12235 298 aa11.89□□□□□ -0.51
UBXN1-202ENST00000301935 HOXA1P49639 335 aaPredicted RBP11.89□□□□□ -0.51
UBXN1-202ENST00000301935 CRIP2P52943 208 aaPredicted RBP11.89□□□□□ -0.51
UBXN1-202ENST00000301935 S100A10P60903 97 aa11.89□□□□□ -0.51
UBXN1-202ENST00000301935 POLR2GP62487 172 aaKnown RBP eCLIP11.89□□□□□ -0.51
UBXN1-202ENST00000301935 RPL23AP62750 156 aaKnown RBP11.89□□□□□ -0.51
UBXN1-202ENST00000301935 VAMP2P63027 116 aa11.89□□□□□ -0.51
UBXN1-202ENST00000301935 PRSS54Q6PEW0 395 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms