RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 TMEM45BQ96B21 275 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 FAM122AQ96E09 287 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 C12orf49Q9H741 205 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 WDR54Q9H977 334 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 CLEC5AQ9NY25 188 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 LY96Q9Y6Y9 160 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 FAM181BA6NEQ2 426 aa10.77□□□□□ -0.68
TVP23A-201ENST00000299866 OOEPA6NGQ2 149 aa10.77□□□□□ -0.68
TVP23A-201ENST00000299866 OR7C2O60412 319 aa10.77□□□□□ -0.68
TVP23A-201ENST00000299866 IGFBP2P18065 325 aa10.77□□□□□ -0.68
TVP23A-201ENST00000299866 SELENOVP59797 346 aa10.77□□□□□ -0.68
TVP23A-201ENST00000299866 ZNF784Q8NCA9 323 aaPredicted RBP10.77□□□□□ -0.68
TVP23A-201ENST00000299866 NEUROG1Q92886 237 aa10.77□□□□□ -0.68
TVP23A-201ENST00000299866 PLEKHA3Q9HB20 300 aa10.77□□□□□ -0.68
TVP23A-201ENST00000299866 IL19Q9UHD0 177 aa10.77□□□□□ -0.68
TVP23A-201ENST00000299866 KMT2EQ8IZD2 1858 aa10.77□□□□□ -0.69
TVP23A-201ENST00000299866 TRAV30A0A087WSZ9 112 aa10.77□□□□□ -0.69
TVP23A-201ENST00000299866 GFRA3O60609 400 aa10.77□□□□□ -0.69
TVP23A-201ENST00000299866 RPL8P62917 257 aaKnown RBP10.77□□□□□ -0.69
TVP23A-201ENST00000299866 TEPPQ6URK8 271 aa10.77□□□□□ -0.69
TVP23A-201ENST00000299866 Q8IYB0 196 aa10.77□□□□□ -0.69
TVP23A-201ENST00000299866 GP6Q9HCN6 339 aa10.77□□□□□ -0.69
TVP23A-201ENST00000299866 OSTCQ9NRP0 149 aa10.77□□□□□ -0.69
TVP23A-201ENST00000299866 TECRQ9NZ01 308 aaKnown RBP10.77□□□□□ -0.69
TVP23A-201ENST00000299866 VPS13AQ96RL7 3174 aa10.77□□□□□ -0.69
TVP23A-201ENST00000299866 ZNF891A8MT65 544 aaPredicted RBP10.77□□□□□ -0.69
TVP23A-201ENST00000299866 REG1AP05451 166 aa10.77□□□□□ -0.69
TVP23A-201ENST00000299866 ZNF146Q15072 292 aa10.77□□□□□ -0.69
TVP23A-201ENST00000299866 OR1C1Q15619 314 aa10.77□□□□□ -0.69
TVP23A-201ENST00000299866 C3AR1Q16581 482 aa10.77□□□□□ -0.69
TVP23A-201ENST00000299866 OR4A47Q6IF82 309 aa10.77□□□□□ -0.69
TVP23A-201ENST00000299866 VHLLQ6RSH7 139 aa10.77□□□□□ -0.69
TVP23A-201ENST00000299866 MUC15Q8N387 334 aa10.77□□□□□ -0.69
TVP23A-201ENST00000299866 CDX2Q99626 313 aaPredicted RBP10.77□□□□□ -0.69
TVP23A-201ENST00000299866 SSBP4Q9BWG4 385 aaPredicted RBP10.77□□□□□ -0.69
TVP23A-201ENST00000299866 GATA2P23769 480 aaPredicted RBP10.76□□□□□ -0.69
TVP23A-201ENST00000299866 VDAC2P45880 294 aaPredicted RBP10.76□□□□□ -0.69
TVP23A-201ENST00000299866 GPR12P47775 334 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 MFAP2P55001 183 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 UBE2G1P62253 170 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 SPINK14Q6IE38 97 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 Q6ZR03 302 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 SPATA12Q7Z6I5 190 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 OR13A1Q8NGR1 328 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 LINC00470Q9BZP3 86 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 CST9LQ9H4G1 147 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 HES4Q9HCC6 221 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 ARL2-SNX15V9GYD0 113 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 OR2T8A6NH00 312 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 NUDT3O95989 172 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 CAMPP49913 170 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 EDDM3AQ14507 147 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 COX19Q49B96 90 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 PNKDQ8N490 385 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 COQ2Q96H96 371 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 GSX1Q9H4S2 264 aaPredicted RBP10.76□□□□□ -0.69
TVP23A-201ENST00000299866 SH2D7A6NKC9 451 aaPredicted RBP10.76□□□□□ -0.69
TVP23A-201ENST00000299866 PRSS46E5RG02 174 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 M0R1X1 148 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 LINC00869P0C866 280 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 RAB31Q13636 194 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 SMIM15Q7Z3B0 74 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 MDP1Q86V88 176 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 SPACA3Q8IXA5 215 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 Q8TCH9 128 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 OR8B2Q96RD0 313 aa10.76□□□□□ -0.69
TVP23A-201ENST00000299866 KNTC1P50748 2209 aa10.75□□□□□ -0.69
TVP23A-201ENST00000299866 A0A1W2PN81 502 aa10.75□□□□□ -0.69
TVP23A-201ENST00000299866 CA7P43166 264 aa10.75□□□□□ -0.69
TVP23A-201ENST00000299866 ERVK-16P61578 105 aa10.75□□□□□ -0.69
TVP23A-201ENST00000299866 OCIAD2Q56VL3 154 aa10.75□□□□□ -0.69
TVP23A-201ENST00000299866 SMRP1Q8NCR6 262 aa10.75□□□□□ -0.69
TVP23A-201ENST00000299866 LINC00479Q96M42 142 aa10.75□□□□□ -0.69
TVP23A-201ENST00000299866 METRNQ9UJH8 293 aa10.75□□□□□ -0.69
TVP23A-201ENST00000299866 TCF19Q9Y242 345 aa10.75□□□□□ -0.69
TVP23A-201ENST00000299866 HCFC1P51610 2035 aa10.75□□□□□ -0.69
TVP23A-201ENST00000299866 NBEAQ8NFP9 2946 aa10.75□□□□□ -0.69
TVP23A-201ENST00000299866 IZUMO1RA6ND01 250 aa10.75□□□□□ -0.69
TVP23A-201ENST00000299866 AREGP15514 252 aa10.75□□□□□ -0.69
TVP23A-201ENST00000299866 FOLR3P41439 243 aa10.75□□□□□ -0.69
TVP23A-201ENST00000299866 DUSP3P51452 185 aaPredicted RBP10.75□□□□□ -0.69
TVP23A-201ENST00000299866 AMMECR1LQ6DCA0 310 aa10.75□□□□□ -0.69
TVP23A-201ENST00000299866 ZNF355PQ9NSJ1 428 aa10.75□□□□□ -0.69
TVP23A-201ENST00000299866 LSM4Q9Y4Z0 139 aaKnown RBP10.75□□□□□ -0.69
TVP23A-201ENST00000299866 ISLRO14498 428 aa10.74□□□□□ -0.69
TVP23A-201ENST00000299866 CELA3BP08861 270 aa10.74□□□□□ -0.69
TVP23A-201ENST00000299866 RPL39P5Q59GN2 51 aa10.74□□□□□ -0.69
TVP23A-201ENST00000299866 OR2Y1Q8NGV0 311 aa10.74□□□□□ -0.69
TVP23A-201ENST00000299866 OBP2BQ9NPH6 170 aa10.74□□□□□ -0.69
TVP23A-201ENST00000299866 IGKV3D-15A0A087WSY6 115 aa10.74□□□□□ -0.69
TVP23A-201ENST00000299866 LY6G6EA0A0G2JKS1 128 aa10.74□□□□□ -0.69
TVP23A-201ENST00000299866 SMIM27A0A1W2PRY6 76 aa10.74□□□□□ -0.69
TVP23A-201ENST00000299866 hDV102S1A0JD36 115 aa10.74□□□□□ -0.69
TVP23A-201ENST00000299866 GGTLC3B5MD39 225 aa10.74□□□□□ -0.69
TVP23A-201ENST00000299866 H0YJW9 148 aa10.74□□□□□ -0.69
TVP23A-201ENST00000299866 PROP1O75360 226 aa10.74□□□□□ -0.69
TVP23A-201ENST00000299866 MYOD1P15172 320 aa10.74□□□□□ -0.69
TVP23A-201ENST00000299866 DUTP33316 252 aaKnown RBP10.74□□□□□ -0.69
TVP23A-201ENST00000299866 Q0VFX4 171 aa10.74□□□□□ -0.69
TVP23A-201ENST00000299866 PRR27Q6MZM9 219 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms