RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 TCF23Q7RTU1 214 aa11.45□□□□□ -0.58
CHRFAM7A-201ENST00000299847 LINC01587Q99440 93 aa11.45□□□□□ -0.58
CHRFAM7A-201ENST00000299847 MRPL32Q9BYC8 188 aaKnown RBP11.45□□□□□ -0.58
CHRFAM7A-201ENST00000299847 DICER1Q9UPY3 1922 aaKnown RBP11.45□□□□□ -0.58
CHRFAM7A-201ENST00000299847 CCL3L1P16619 93 aa11.45□□□□□ -0.58
CHRFAM7A-201ENST00000299847 DNM1P46Q6ZS02 220 aa11.45□□□□□ -0.58
CHRFAM7A-201ENST00000299847 DNASE2BQ8WZ79 361 aa11.45□□□□□ -0.58
CHRFAM7A-201ENST00000299847 ABHD17AQ96GS6 310 aa11.45□□□□□ -0.58
CHRFAM7A-201ENST00000299847 RPRMQ9NS64 109 aa11.45□□□□□ -0.58
CHRFAM7A-201ENST00000299847 CKAP5Q14008 2032 aa11.45□□□□□ -0.58
CHRFAM7A-201ENST00000299847 CLDND2Q8NHS1 167 aa11.45□□□□□ -0.58
CHRFAM7A-201ENST00000299847 SMIM13P0DJ93 91 aa11.45□□□□□ -0.58
CHRFAM7A-201ENST00000299847 SAA1P0DJI8 122 aaPredicted RBP11.45□□□□□ -0.58
CHRFAM7A-201ENST00000299847 RCC1LQ96I51 464 aaKnown RBP11.45□□□□□ -0.58
CHRFAM7A-201ENST00000299847 ZNF414Q96IQ9 312 aa11.45□□□□□ -0.58
CHRFAM7A-201ENST00000299847 PTPRFP10586 1907 aa11.44□□□□□ -0.58
CHRFAM7A-201ENST00000299847 PMCHL2Q9BQD1 86 aa11.44□□□□□ -0.58
CHRFAM7A-201ENST00000299847 IFI27L2Q9H2X8 130 aa11.44□□□□□ -0.58
CHRFAM7A-201ENST00000299847 A0A1W2PR77 199 aa11.44□□□□□ -0.58
CHRFAM7A-201ENST00000299847 ASIPP42127 132 aa11.44□□□□□ -0.58
CHRFAM7A-201ENST00000299847 JOSD1Q15040 202 aaPredicted RBP11.44□□□□□ -0.58
CHRFAM7A-201ENST00000299847 CHRNA10Q9GZZ6 450 aa11.44□□□□□ -0.58
CHRFAM7A-201ENST00000299847 TMEM101Q96IK0 257 aa11.44□□□□□ -0.58
CHRFAM7A-201ENST00000299847 RTBDNQ9BSG5 229 aaPredicted RBP11.44□□□□□ -0.58
CHRFAM7A-201ENST00000299847 FOXH1O75593 365 aa11.44□□□□□ -0.58
CHRFAM7A-201ENST00000299847 TYMSP04818 313 aa11.44□□□□□ -0.58
CHRFAM7A-201ENST00000299847 MDC1Q14676 2089 aaKnown RBP11.44□□□□□ -0.58
CHRFAM7A-201ENST00000299847 IGHV2OR16-5A0A0B4J2B6 119 aa11.44□□□□□ -0.58
CHRFAM7A-201ENST00000299847 NBEAP1P0C6P0 100 aa11.44□□□□□ -0.58
CHRFAM7A-201ENST00000299847 ARPC1AQ92747 370 aa11.44□□□□□ -0.58
CHRFAM7A-201ENST00000299847 C10orf128Q5T292 105 aa11.43□□□□□ -0.58
CHRFAM7A-201ENST00000299847 SCGB3A1Q96QR1 104 aa11.43□□□□□ -0.58
CHRFAM7A-201ENST00000299847 SSBP4Q9BWG4 385 aaPredicted RBP11.43□□□□□ -0.58
CHRFAM7A-201ENST00000299847 ELOVL5Q9NYP7 299 aa11.43□□□□□ -0.58
CHRFAM7A-201ENST00000299847 SOX21Q9Y651 276 aaPredicted RBP11.43□□□□□ -0.58
CHRFAM7A-201ENST00000299847 IFNL4K9M1U5 179 aa11.43□□□□□ -0.58
CHRFAM7A-201ENST00000299847 PPIFP30405 207 aaKnown RBP11.43□□□□□ -0.58
CHRFAM7A-201ENST00000299847 CDX1P47902 265 aaPredicted RBP11.43□□□□□ -0.58
CHRFAM7A-201ENST00000299847 PLSCR2Q9NRY7 297 aa11.43□□□□□ -0.58
CHRFAM7A-201ENST00000299847 DNAL4O96015 105 aa11.43□□□□□ -0.58
CHRFAM7A-201ENST00000299847 NUDT11Q96G61 164 aa11.43□□□□□ -0.58
CHRFAM7A-201ENST00000299847 STRCP1A6NGW2 1772 aa11.43□□□□□ -0.58
CHRFAM7A-201ENST00000299847 TRAV12-3A0A0B4J271 114 aa11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 DPRXA6NFQ7 191 aa11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 COX5BP10606 129 aa11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 RIPPLY2Q5TAB7 128 aa11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 ZNF600Q6ZNG1 722 aa11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 C9orf106Q8NAJ2 232 aa11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 RNASEH2CQ8TDP1 164 aaKnown RBP11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 RNASE7Q9H1E1 156 aaKnown RBP11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 CD55P08174 381 aa11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 MESP1Q9BRJ9 268 aa11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 C7orf69Q9H7B7 122 aa11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 COL24A1Q17RW2 1714 aa11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 APOMO95445 188 aa11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 Q9H3A6 140 aa11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 YAE1D1Q9NRH1 226 aa11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 PDCD11Q14690 1871 aaKnown RBP11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 REC114Q7Z4M0 266 aa11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 PLPPR1Q8TBJ4 325 aa11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 FAM168AQ92567 244 aa11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 SDHCQ99643 169 aaPredicted RBP11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 PGPEP1Q9NXJ5 209 aa11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 SEMA5BQ9P283 1151 aa11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 NPIPB4C9JG80 1138 aa11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 PSG7Q13046 419 aa11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 GATAD1Q8WUU5 269 aa11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 C11orf68Q9H3H3 251 aaKnown RBP11.42□□□□□ -0.58
CHRFAM7A-201ENST00000299847 EFNB1P98172 346 aa11.41□□□□□ -0.58
CHRFAM7A-201ENST00000299847 TBR1Q16650 682 aa11.41□□□□□ -0.58
CHRFAM7A-201ENST00000299847 COLCA1Q6ZS62 124 aa11.41□□□□□ -0.58
CHRFAM7A-201ENST00000299847 JKAMPQ9P055 326 aa11.41□□□□□ -0.58
CHRFAM7A-201ENST00000299847 LINC00527Q9UJ94 153 aa11.41□□□□□ -0.58
CHRFAM7A-201ENST00000299847 A0A1B0GV72 72 aa11.41□□□□□ -0.58
CHRFAM7A-201ENST00000299847 RAMP3O60896 148 aa11.41□□□□□ -0.58
CHRFAM7A-201ENST00000299847 TMEM95Q3KNT9 176 aa11.41□□□□□ -0.58
CHRFAM7A-201ENST00000299847 NPIPB9F8W1W9 429 aa11.41□□□□□ -0.58
CHRFAM7A-201ENST00000299847 NPIPB7O75200 414 aa11.41□□□□□ -0.58
CHRFAM7A-201ENST00000299847 EVI2AP22794 236 aa11.41□□□□□ -0.58
CHRFAM7A-201ENST00000299847 SRSF3P84103 164 aaKnown RBP11.41□□□□□ -0.58
CHRFAM7A-201ENST00000299847 OR52E5Q8NH55 327 aa11.41□□□□□ -0.58
CHRFAM7A-201ENST00000299847 AICDAQ9GZX7 198 aa11.41□□□□□ -0.58
CHRFAM7A-201ENST00000299847 CASP8AP2Q9UKL3 1982 aa11.41□□□□□ -0.58
CHRFAM7A-201ENST00000299847 IGLV3-21P80748 117 aaPredicted RBP11.41□□□□□ -0.58
CHRFAM7A-201ENST00000299847 TXNDC17Q9BRA2 123 aa11.41□□□□□ -0.58
CHRFAM7A-201ENST00000299847 A0A0G2JK05 382 aa11.41□□□□□ -0.58
CHRFAM7A-201ENST00000299847 TIMM23BQ5SRD1 257 aa11.41□□□□□ -0.58
CHRFAM7A-201ENST00000299847 OR5AN1Q8NGI8 311 aa11.41□□□□□ -0.58
CHRFAM7A-201ENST00000299847 IL36BQ9NZH7 164 aa11.41□□□□□ -0.58
CHRFAM7A-201ENST00000299847 MTCL1Q9Y4B5 1905 aaKnown RBP11.4□□□□□ -0.58
CHRFAM7A-201ENST00000299847 EFEMP2O95967 443 aa11.4□□□□□ -0.58
CHRFAM7A-201ENST00000299847 SAA2-SAA4A0A096LPE2 208 aa11.4□□□□□ -0.58
CHRFAM7A-201ENST00000299847 SAA2P0DJI9 122 aaPredicted RBP11.4□□□□□ -0.58
CHRFAM7A-201ENST00000299847 TDGF1P13385 188 aa11.4□□□□□ -0.58
CHRFAM7A-201ENST00000299847 LEPP41159 167 aa11.4□□□□□ -0.58
CHRFAM7A-201ENST00000299847 TNFSF10P50591 281 aa11.4□□□□□ -0.58
CHRFAM7A-201ENST00000299847 UCP3P55916 312 aa11.4□□□□□ -0.58
CHRFAM7A-201ENST00000299847 NSUN5P1Q3KNT7 163 aa11.4□□□□□ -0.58
CHRFAM7A-201ENST00000299847 IGHV3-64A0A075B6Q5 118 aa11.4□□□□□ -0.58
CHRFAM7A-201ENST00000299847 TRGV2A0A075B6R0 118 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms