RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 TMEM14BQ9NUH8 114 aa11.17□□□□□ -0.62
CDH8-201ENST00000299345 LOC400499M0QZD8 3231 aa11.17□□□□□ -0.62
CDH8-201ENST00000299345 UPK2O00526 184 aa11.17□□□□□ -0.62
CDH8-201ENST00000299345 IGKV1-16P04430 117 aa11.17□□□□□ -0.62
CDH8-201ENST00000299345 IGFBP2P18065 325 aa11.17□□□□□ -0.62
CDH8-201ENST00000299345 ZCCHC14Q8WYQ9 949 aaKnown RBP11.17□□□□□ -0.62
CDH8-201ENST00000299345 BTF3L4Q96K17 158 aa11.17□□□□□ -0.62
CDH8-201ENST00000299345 OR7C2O60412 319 aa11.16□□□□□ -0.62
CDH8-201ENST00000299345 GCHFRP30047 84 aa11.16□□□□□ -0.62
CDH8-201ENST00000299345 ARSJQ5FYB0 599 aaPredicted RBP11.16□□□□□ -0.62
CDH8-201ENST00000299345 SLC25A48Q6ZT89 311 aaKnown RBP11.16□□□□□ -0.62
CDH8-201ENST00000299345 SOD3P08294 240 aa11.16□□□□□ -0.62
CDH8-201ENST00000299345 CT45A6P0DMU7 189 aa11.16□□□□□ -0.62
CDH8-201ENST00000299345 CT45A5P0DMU8 189 aa11.16□□□□□ -0.62
CDH8-201ENST00000299345 CT45A7P0DMV0 189 aa11.16□□□□□ -0.62
CDH8-201ENST00000299345 FLYWCH2Q96CP2 140 aaKnown RBP11.16□□□□□ -0.62
CDH8-201ENST00000299345 DERL1Q9BUN8 251 aa11.16□□□□□ -0.62
CDH8-201ENST00000299345 FUT9Q9Y231 359 aa11.16□□□□□ -0.62
CDH8-201ENST00000299345 HCFC1P51610 2035 aa11.16□□□□□ -0.62
CDH8-201ENST00000299345 XKRY2A2RUG3 117 aa11.16□□□□□ -0.62
CDH8-201ENST00000299345 LINC00587B1AMM8 73 aa11.16□□□□□ -0.62
CDH8-201ENST00000299345 CCKARP32238 428 aa11.16□□□□□ -0.62
CDH8-201ENST00000299345 SRP14P37108 136 aaKnown RBP11.16□□□□□ -0.62
CDH8-201ENST00000299345 TMPRSS3P57727 454 aa11.16□□□□□ -0.62
CDH8-201ENST00000299345 MEF2CQ06413 473 aaPredicted RBP11.16□□□□□ -0.62
CDH8-201ENST00000299345 EFNB3Q15768 340 aa11.16□□□□□ -0.62
CDH8-201ENST00000299345 ACY3Q96HD9 319 aa11.16□□□□□ -0.62
CDH8-201ENST00000299345 SLC35E1Q96K37 410 aa11.16□□□□□ -0.62
CDH8-201ENST00000299345 MRPL20Q9BYC9 149 aaKnown RBP11.16□□□□□ -0.62
CDH8-201ENST00000299345 ENSAO43768 121 aaKnown RBP11.15□□□□□ -0.62
CDH8-201ENST00000299345 SEPSECSQ9HD40 501 aaKnown RBP11.15□□□□□ -0.62
CDH8-201ENST00000299345 SLC45A2Q9UMX9 530 aa11.15□□□□□ -0.62
CDH8-201ENST00000299345 PGPEP1LA6NFU8 196 aa11.15□□□□□ -0.62
CDH8-201ENST00000299345 SAA1P0DJI8 122 aaPredicted RBP11.15□□□□□ -0.62
CDH8-201ENST00000299345 CHRNB4P30926 498 aa11.15□□□□□ -0.62
CDH8-201ENST00000299345 OR10J1P30954 320 aa11.15□□□□□ -0.62
CDH8-201ENST00000299345 PRCDQ00LT1 54 aa11.15□□□□□ -0.62
CDH8-201ENST00000299345 PSG5Q15238 335 aa11.15□□□□□ -0.62
CDH8-201ENST00000299345 LINC01551Q86U37 167 aa11.15□□□□□ -0.62
CDH8-201ENST00000299345 HIST3H2BBQ8N257 126 aa11.15□□□□□ -0.62
CDH8-201ENST00000299345 RPL29P47914 159 aaKnown RBP11.14□□□□□ -0.63
CDH8-201ENST00000299345 TEX36Q5VZQ5 186 aa11.14□□□□□ -0.63
CDH8-201ENST00000299345 PRSS33Q8NF86 280 aa11.14□□□□□ -0.63
CDH8-201ENST00000299345 OR1L8Q8NGR8 309 aa11.14□□□□□ -0.63
CDH8-201ENST00000299345 OR5B3Q8NH48 314 aa11.14□□□□□ -0.63
CDH8-201ENST00000299345 FAM122AQ96E09 287 aa11.14□□□□□ -0.63
CDH8-201ENST00000299345 PACRGQ96M98 296 aaPredicted RBP11.14□□□□□ -0.63
CDH8-201ENST00000299345 TRAV20A0A0B4J274 112 aa11.14□□□□□ -0.63
CDH8-201ENST00000299345 SCO2A0A1W2PP80 73 aa11.14□□□□□ -0.63
CDH8-201ENST00000299345 NPPCP23582 126 aa11.14□□□□□ -0.63
CDH8-201ENST00000299345 TAS2R45P59539 299 aa11.14□□□□□ -0.63
CDH8-201ENST00000299345 SPATA31B1PQ5VZV4 182 aa11.14□□□□□ -0.63
CDH8-201ENST00000299345 ZNF439Q8NDP4 499 aa11.14□□□□□ -0.63
CDH8-201ENST00000299345 SGMS2Q8NHU3 365 aa11.14□□□□□ -0.63
CDH8-201ENST00000299345 OSR1Q8TAX0 266 aaPredicted RBP11.14□□□□□ -0.63
CDH8-201ENST00000299345 TMEM170AQ8WVE7 144 aa11.14□□□□□ -0.63
CDH8-201ENST00000299345 TMEM106BQ9NUM4 274 aa11.14□□□□□ -0.63
CDH8-201ENST00000299345 ZNF257Q9Y2Q1 563 aa11.14□□□□□ -0.63
CDH8-201ENST00000299345 TNCP24821 2201 aa11.14□□□□□ -0.63
CDH8-201ENST00000299345 C1QTNF9P0C862 333 aa11.14□□□□□ -0.63
CDH8-201ENST00000299345 RPL8P62917 257 aaKnown RBP11.14□□□□□ -0.63
CDH8-201ENST00000299345 PYY3Q5JQD4 70 aa11.14□□□□□ -0.63
CDH8-201ENST00000299345 TCF23Q7RTU1 214 aa11.14□□□□□ -0.63
CDH8-201ENST00000299345 NABP2Q9BQ15 211 aa11.14□□□□□ -0.63
CDH8-201ENST00000299345 OR10G8Q8NGN5 311 aa11.13□□□□□ -0.63
CDH8-201ENST00000299345 TECRQ9NZ01 308 aaKnown RBP11.13□□□□□ -0.63
CDH8-201ENST00000299345 DSCAMO60469 2012 aa11.13□□□□□ -0.63
CDH8-201ENST00000299345 TEX50A0A1B0GTY4 177 aa11.13□□□□□ -0.63
CDH8-201ENST00000299345 POU2AF1Q16633 256 aa11.13□□□□□ -0.63
CDH8-201ENST00000299345 SSX8Q7RTT4 187 aa11.13□□□□□ -0.63
CDH8-201ENST00000299345 TMEM144Q7Z5S9 345 aa11.13□□□□□ -0.63
CDH8-201ENST00000299345 Q8N7P7 452 aa11.13□□□□□ -0.63
CDH8-201ENST00000299345 VSTM2AQ8TAG5 236 aa11.13□□□□□ -0.63
CDH8-201ENST00000299345 ZNF90Q03938 601 aa11.13□□□□□ -0.63
CDH8-201ENST00000299345 TMEM249Q2WGJ8 235 aa11.13□□□□□ -0.63
CDH8-201ENST00000299345 TMEM200BQ69YZ2 307 aa11.13□□□□□ -0.63
CDH8-201ENST00000299345 TMEM167BQ9NRX6 74 aa11.13□□□□□ -0.63
CDH8-201ENST00000299345 LSM4Q9Y4Z0 139 aaKnown RBP11.13□□□□□ -0.63
CDH8-201ENST00000299345 POLEQ07864 2286 aa11.13□□□□□ -0.63
CDH8-201ENST00000299345 SRRM4A7MD48 611 aaKnown RBP11.12□□□□□ -0.63
CDH8-201ENST00000299345 GATA2P23769 480 aaPredicted RBP11.12□□□□□ -0.63
CDH8-201ENST00000299345 SUB1P53999 127 aaKnown RBP eCLIP11.12□□□□□ -0.63
CDH8-201ENST00000299345 CASP6P55212 293 aa11.12□□□□□ -0.63
CDH8-201ENST00000299345 MIR17HGQ75NE6 70 aa11.12□□□□□ -0.63
CDH8-201ENST00000299345 TGIF2LXQ8IUE1 241 aa11.12□□□□□ -0.63
CDH8-201ENST00000299345 SFRP2Q96HF1 295 aa11.12□□□□□ -0.63
CDH8-201ENST00000299345 TRAPPC1Q9Y5R8 145 aa11.12□□□□□ -0.63
CDH8-201ENST00000299345 PRSS46E5RG02 174 aa11.12□□□□□ -0.63
CDH8-201ENST00000299345 TMEM178BH3BS89 294 aa11.12□□□□□ -0.63
CDH8-201ENST00000299345 ATP5IP56385 69 aaPredicted RBP11.12□□□□□ -0.63
CDH8-201ENST00000299345 OR10W1Q8NGF6 305 aa11.12□□□□□ -0.63
CDH8-201ENST00000299345 OR1P1Q8NH06 330 aa11.12□□□□□ -0.63
CDH8-201ENST00000299345 BET1LQ9NYM9 111 aa11.12□□□□□ -0.63
CDH8-201ENST00000299345 NBEAQ8NFP9 2946 aa11.12□□□□□ -0.63
CDH8-201ENST00000299345 NDUFS6O75380 124 aaKnown RBP11.12□□□□□ -0.63
CDH8-201ENST00000299345 IL3RAP26951 378 aa11.12□□□□□ -0.63
CDH8-201ENST00000299345 ASCL5Q7RTU5 278 aa11.12□□□□□ -0.63
CDH8-201ENST00000299345 MOB3BQ86TA1 216 aa11.12□□□□□ -0.63
CDH8-201ENST00000299345 OR4C13Q8NGP0 309 aa11.12□□□□□ -0.63
CDH8-201ENST00000299345 IFITM10A6NMD0 228 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms