RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 OR4F17Q8NGA8 305 aa16.71■□□□□ 0.27
SMCO4-201ENST00000298966 HARBI1Q96MB7 349 aa16.71■□□□□ 0.27
SMCO4-201ENST00000298966 OR4F4Q96R69 305 aa16.71■□□□□ 0.27
SMCO4-201ENST00000298966 SSX3Q99909 188 aa16.71■□□□□ 0.27
SMCO4-201ENST00000298966 FBXO24O75426 580 aa16.7■□□□□ 0.26
SMCO4-201ENST00000298966 DIAPH2-AS1Q14236 149 aa16.7■□□□□ 0.26
SMCO4-201ENST00000298966 ZNF429Q86V71 674 aa16.7■□□□□ 0.26
SMCO4-201ENST00000298966 OR52E5Q8NH55 327 aa16.7■□□□□ 0.26
SMCO4-201ENST00000298966 OR4A16Q8NH70 328 aa16.7■□□□□ 0.26
SMCO4-201ENST00000298966 RAB40CQ96S21 281 aa16.7■□□□□ 0.26
SMCO4-201ENST00000298966 TSNAXQ99598 290 aaKnown RBP16.7■□□□□ 0.26
SMCO4-201ENST00000298966 ARL6Q9H0F7 186 aa16.7■□□□□ 0.26
SMCO4-201ENST00000298966 C11orf1Q9H5F2 150 aa16.7■□□□□ 0.26
SMCO4-201ENST00000298966 TMEM140Q9NV12 185 aa16.7■□□□□ 0.26
SMCO4-201ENST00000298966 FKBP11Q9NYL4 201 aa16.7■□□□□ 0.26
SMCO4-201ENST00000298966 RCL1Q9Y2P8 373 aaKnown RBP16.7■□□□□ 0.26
SMCO4-201ENST00000298966 SPDEFO95238 335 aa16.69■□□□□ 0.26
SMCO4-201ENST00000298966 VMA21Q3ZAQ7 101 aa16.69■□□□□ 0.26
SMCO4-201ENST00000298966 CXorf66Q5JRM2 361 aaPredicted RBP16.69■□□□□ 0.26
SMCO4-201ENST00000298966 Q6ZRM9 215 aa16.69■□□□□ 0.26
SMCO4-201ENST00000298966 NPFFR1Q9GZQ6 430 aa16.69■□□□□ 0.26
SMCO4-201ENST00000298966 HSPB7Q9UBY9 170 aa16.69■□□□□ 0.26
SMCO4-201ENST00000298966 PRNDQ9UKY0 176 aa16.69■□□□□ 0.26
SMCO4-201ENST00000298966 DNAH9Q9NYC9 4486 aa16.68■□□□□ 0.26
SMCO4-201ENST00000298966 IGKV1-16P04430 117 aa16.68■□□□□ 0.26
SMCO4-201ENST00000298966 IL6RP08887 468 aaPredicted RBP16.68■□□□□ 0.26
SMCO4-201ENST00000298966 BRS3P32247 399 aa16.68■□□□□ 0.26
SMCO4-201ENST00000298966 P2RY1P47900 373 aa16.68■□□□□ 0.26
SMCO4-201ENST00000298966 TAS2R30P59541 319 aa16.68■□□□□ 0.26
SMCO4-201ENST00000298966 UBE2KP61086 200 aa16.68■□□□□ 0.26
SMCO4-201ENST00000298966 RPS16P62249 146 aaKnown RBP16.68■□□□□ 0.26
SMCO4-201ENST00000298966 OR4A47Q6IF82 309 aa16.68■□□□□ 0.26
SMCO4-201ENST00000298966 PUSL1Q8N0Z8 303 aaKnown RBP16.68■□□□□ 0.26
SMCO4-201ENST00000298966 BCL2L11O43521 198 aa16.67■□□□□ 0.26
SMCO4-201ENST00000298966 VAMP2P63027 116 aa16.67■□□□□ 0.26
SMCO4-201ENST00000298966 LRRC75BQ2VPJ9 315 aa16.67■□□□□ 0.26
SMCO4-201ENST00000298966 NDUFA11Q86Y39 141 aa16.67■□□□□ 0.26
SMCO4-201ENST00000298966 TEX45Q8NA69 505 aa16.67■□□□□ 0.26
SMCO4-201ENST00000298966 CIB3Q96Q77 187 aaPredicted RBP16.67■□□□□ 0.26
SMCO4-201ENST00000298966 FOXA2Q9Y261 457 aaPredicted RBP16.67■□□□□ 0.26
SMCO4-201ENST00000298966 ZNF257Q9Y2Q1 563 aa16.67■□□□□ 0.26
SMCO4-201ENST00000298966 KANTRA0A1W2PQU2 76 aa16.66■□□□□ 0.26
SMCO4-201ENST00000298966 C15orf61A6NNL5 157 aa16.66■□□□□ 0.26
SMCO4-201ENST00000298966 SYNGR2O43760 224 aa16.66■□□□□ 0.26
SMCO4-201ENST00000298966 TSC22D2O75157 780 aa16.66■□□□□ 0.26
SMCO4-201ENST00000298966 RBMXL2O75526 392 aaKnown RBP16.66■□□□□ 0.26
SMCO4-201ENST00000298966 SCAF4O95104 1147 aaKnown RBP16.66■□□□□ 0.26
SMCO4-201ENST00000298966 POLR2GP62487 172 aaKnown RBP eCLIP16.66■□□□□ 0.26
SMCO4-201ENST00000298966 TNFRSF9Q07011 255 aa16.66■□□□□ 0.26
SMCO4-201ENST00000298966 IZUMO4Q1ZYL8 232 aa16.66■□□□□ 0.26
SMCO4-201ENST00000298966 LHFPL4Q7Z7J7 247 aa16.66■□□□□ 0.26
SMCO4-201ENST00000298966 THNSL2Q86YJ6 484 aa16.66■□□□□ 0.26
SMCO4-201ENST00000298966 TMEM167AQ8TBQ9 72 aa16.66■□□□□ 0.26
SMCO4-201ENST00000298966 WWC2-AS2Q96NR7 200 aa16.66■□□□□ 0.26
SMCO4-201ENST00000298966 WSB1Q9Y6I7 421 aa16.66■□□□□ 0.26
SMCO4-201ENST00000298966 K7EIL1 84 aa16.65■□□□□ 0.26
SMCO4-201ENST00000298966 UPK2O00526 184 aa16.65■□□□□ 0.26
SMCO4-201ENST00000298966 KBTBD11O94819 623 aa16.65■□□□□ 0.26
SMCO4-201ENST00000298966 SAA1P0DJI8 122 aaPredicted RBP16.65■□□□□ 0.26
SMCO4-201ENST00000298966 CD28P10747 220 aa16.65■□□□□ 0.26
SMCO4-201ENST00000298966 CD33P20138 364 aa16.65■□□□□ 0.26
SMCO4-201ENST00000298966 RPL12P30050 165 aaKnown RBP16.65■□□□□ 0.26
SMCO4-201ENST00000298966 AP2S1P53680 142 aaPredicted RBP16.65■□□□□ 0.26
SMCO4-201ENST00000298966 SPCS3P61009 180 aa16.65■□□□□ 0.26
SMCO4-201ENST00000298966 RPL23AP62750 156 aaKnown RBP16.65■□□□□ 0.26
SMCO4-201ENST00000298966 SSX2Q16385 188 aa16.65■□□□□ 0.26
SMCO4-201ENST00000298966 LDLRAD2Q5SZI1 272 aa16.65■□□□□ 0.26
SMCO4-201ENST00000298966 ZNF767PQ75MW2 155 aa16.65■□□□□ 0.26
SMCO4-201ENST00000298966 SSX9Q7RTT3 188 aa16.65■□□□□ 0.26
SMCO4-201ENST00000298966 SLC51BQ86UW2 128 aa16.65■□□□□ 0.26
SMCO4-201ENST00000298966 OR2T10Q8NGZ9 312 aa16.65■□□□□ 0.26
SMCO4-201ENST00000298966 ARPC5LQ9BPX5 153 aa16.65■□□□□ 0.26
SMCO4-201ENST00000298966 HILPDAQ9Y5L2 63 aa16.65■□□□□ 0.26
SMCO4-201ENST00000298966 MSGN1A6NI15 193 aa16.64■□□□□ 0.25
SMCO4-201ENST00000298966 SSSCA1O60232 199 aa16.64■□□□□ 0.25
SMCO4-201ENST00000298966 OR9G9P0C7N8 305 aa16.64■□□□□ 0.25
SMCO4-201ENST00000298966 DYNLT3P51808 116 aa16.64■□□□□ 0.25
SMCO4-201ENST00000298966 EBI3Q14213 229 aa16.64■□□□□ 0.25
SMCO4-201ENST00000298966 AANATQ16613 207 aa16.64■□□□□ 0.25
SMCO4-201ENST00000298966 DEFB121Q5J5C9 76 aa16.64■□□□□ 0.25
SMCO4-201ENST00000298966 OR5B3Q8NH48 314 aa16.64■□□□□ 0.25
SMCO4-201ENST00000298966 C17orf50Q8WW18 174 aa16.64■□□□□ 0.25
SMCO4-201ENST00000298966 SMIM8Q96KF7 97 aa16.64■□□□□ 0.25
SMCO4-201ENST00000298966 CLCC1Q96S66 551 aa16.64■□□□□ 0.25
SMCO4-201ENST00000298966 SLC25A31Q9H0C2 315 aa16.64■□□□□ 0.25
SMCO4-201ENST00000298966 MEGF9Q9H1U4 602 aa16.64■□□□□ 0.25
SMCO4-201ENST00000298966 TMEM14BQ9NUH8 114 aa16.64■□□□□ 0.25
SMCO4-201ENST00000298966 TAAR5O14804 337 aa16.63■□□□□ 0.25
SMCO4-201ENST00000298966 MOSP00540 346 aa16.63■□□□□ 0.25
SMCO4-201ENST00000298966 IGLL1P15814 213 aa16.63■□□□□ 0.25
SMCO4-201ENST00000298966 MAS1LP35410 378 aa16.63■□□□□ 0.25
SMCO4-201ENST00000298966 HSPE1P61604 102 aaKnown RBP16.63■□□□□ 0.25
SMCO4-201ENST00000298966 TEX261Q6UWH6 196 aa16.63■□□□□ 0.25
SMCO4-201ENST00000298966 OR8H1Q8NGG4 311 aa16.63■□□□□ 0.25
SMCO4-201ENST00000298966 MAGT1Q9H0U3 335 aa16.63■□□□□ 0.25
SMCO4-201ENST00000298966 LYRM2Q9NU23 88 aaPredicted RBP16.63■□□□□ 0.25
SMCO4-201ENST00000298966 U3KQ87 197 aa16.63■□□□□ 0.25
SMCO4-201ENST00000298966 SRRM4A7MD48 611 aaKnown RBP16.62■□□□□ 0.25
SMCO4-201ENST00000298966 CHST1O43916 411 aa16.62■□□□□ 0.25
SMCO4-201ENST00000298966 IGLV2-23P01705 113 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms