RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 RBMXL2O75526 392 aaKnown RBP12.93□□□□□ -0.34
UBAP1-201ENST00000297661 KLF14Q8TD94 323 aaPredicted RBP12.93□□□□□ -0.34
UBAP1-201ENST00000297661 WNT10AQ9GZT5 417 aa12.93□□□□□ -0.34
UBAP1-201ENST00000297661 IL36BQ9NZH7 164 aa12.93□□□□□ -0.34
UBAP1-201ENST00000297661 TRAV38-1A0A0B4J264 116 aa12.93□□□□□ -0.34
UBAP1-201ENST00000297661 IGHV2OR16-5A0A0B4J2B6 119 aa12.93□□□□□ -0.34
UBAP1-201ENST00000297661 FAM90A26D6RGX4 464 aa12.93□□□□□ -0.34
UBAP1-201ENST00000297661 PMCHP20382 165 aa12.93□□□□□ -0.34
UBAP1-201ENST00000297661 FABP6P51161 128 aa12.93□□□□□ -0.34
UBAP1-201ENST00000297661 ZNF146Q15072 292 aa12.93□□□□□ -0.34
UBAP1-201ENST00000297661 FBLN7Q53RD9 439 aa12.93□□□□□ -0.34
UBAP1-201ENST00000297661 GCSAMLQ5JQS6 135 aa12.93□□□□□ -0.34
UBAP1-201ENST00000297661 TMEM204Q9BSN7 226 aa12.93□□□□□ -0.34
UBAP1-201ENST00000297661 QTRT1Q9BXR0 403 aaKnown RBP12.93□□□□□ -0.34
UBAP1-201ENST00000297661 MBNL3Q9NUK0 354 aaKnown RBP12.93□□□□□ -0.34
UBAP1-201ENST00000297661 IGHV2-70DA0A0C4DH43 119 aa12.92□□□□□ -0.34
UBAP1-201ENST00000297661 A0A1W2PN81 502 aa12.92□□□□□ -0.34
UBAP1-201ENST00000297661 HBZP02008 142 aa12.92□□□□□ -0.34
UBAP1-201ENST00000297661 TSPOP30536 169 aa12.92□□□□□ -0.34
UBAP1-201ENST00000297661 HLA-DRB5Q30154 266 aa12.92□□□□□ -0.34
UBAP1-201ENST00000297661 MOB1BQ7L9L4 216 aa12.92□□□□□ -0.34
UBAP1-201ENST00000297661 OR10P1Q8NGE3 313 aa12.92□□□□□ -0.34
UBAP1-201ENST00000297661 BET1LQ9NYM9 111 aa12.92□□□□□ -0.34
UBAP1-201ENST00000297661 PMS2P5A8MQ11 134 aa12.92□□□□□ -0.34
UBAP1-201ENST00000297661 ZG16O60844 167 aa12.92□□□□□ -0.34
UBAP1-201ENST00000297661 BRWD1-AS2P59051 145 aa12.92□□□□□ -0.34
UBAP1-201ENST00000297661 OR2D3Q8NGH3 330 aa12.92□□□□□ -0.34
UBAP1-201ENST00000297661 FER1L6-AS2Q96M78 137 aa12.92□□□□□ -0.34
UBAP1-201ENST00000297661 KCNIP1Q9NZI2 227 aa12.92□□□□□ -0.34
UBAP1-201ENST00000297661 TRAV9-1A0A075B6T8 112 aa12.91□□□□□ -0.34
UBAP1-201ENST00000297661 ODAMA1E959 279 aa12.91□□□□□ -0.34
UBAP1-201ENST00000297661 CBY3A6NI87 242 aa12.91□□□□□ -0.34
UBAP1-201ENST00000297661 M0QZ24 198 aa12.91□□□□□ -0.34
UBAP1-201ENST00000297661 MRPL49Q13405 166 aaKnown RBP12.91□□□□□ -0.34
UBAP1-201ENST00000297661 MORN2Q502X0 79 aa12.91□□□□□ -0.34
UBAP1-201ENST00000297661 KLHDC1Q8N7A1 406 aa12.91□□□□□ -0.34
UBAP1-201ENST00000297661 GALMQ96C23 342 aa12.91□□□□□ -0.34
UBAP1-201ENST00000297661 GMPPAQ96IJ6 420 aaPredicted RBP12.91□□□□□ -0.34
UBAP1-201ENST00000297661 HEATR1Q9H583 2144 aaKnown RBP12.91□□□□□ -0.34
UBAP1-201ENST00000297661 A8MXE2 369 aa12.91□□□□□ -0.34
UBAP1-201ENST00000297661 LGALS4P56470 323 aa12.91□□□□□ -0.34
UBAP1-201ENST00000297661 VWA1Q6PCB0 445 aa12.91□□□□□ -0.34
UBAP1-201ENST00000297661 ATOH7Q8N100 152 aa12.91□□□□□ -0.34
UBAP1-201ENST00000297661 COQ2Q96H96 371 aa12.91□□□□□ -0.34
UBAP1-201ENST00000297661 SLC35D1Q9NTN3 355 aa12.91□□□□□ -0.34
UBAP1-201ENST00000297661 HSPB7Q9UBY9 170 aa12.91□□□□□ -0.34
UBAP1-201ENST00000297661 SCO2A0A1W2PP80 73 aa12.9□□□□□ -0.34
UBAP1-201ENST00000297661 DPRXA6NFQ7 191 aa12.9□□□□□ -0.34
UBAP1-201ENST00000297661 PPBPP02775 128 aa12.9□□□□□ -0.34
UBAP1-201ENST00000297661 C3orf79P0CE67 100 aa12.9□□□□□ -0.34
UBAP1-201ENST00000297661 RAC2P15153 192 aa12.9□□□□□ -0.34
UBAP1-201ENST00000297661 CCL11P51671 97 aa12.9□□□□□ -0.34
UBAP1-201ENST00000297661 EDDM3AQ14507 147 aa12.9□□□□□ -0.34
UBAP1-201ENST00000297661 C11orf53Q8IXP5 236 aa12.9□□□□□ -0.34
UBAP1-201ENST00000297661 Q8IYB0 196 aa12.9□□□□□ -0.34
UBAP1-201ENST00000297661 TCTEX1D1Q8N7M0 179 aa12.9□□□□□ -0.34
UBAP1-201ENST00000297661 RCHY1Q96PM5 261 aa12.9□□□□□ -0.34
UBAP1-201ENST00000297661 FAM234AQ9H0X4 552 aa12.9□□□□□ -0.34
UBAP1-201ENST00000297661 SPTA1P02549 2419 aa12.9□□□□□ -0.34
UBAP1-201ENST00000297661 A0A1W2PS18 150 aa12.9□□□□□ -0.34
UBAP1-201ENST00000297661 TMEM30CPA0ZSE6 113 aa12.9□□□□□ -0.34
UBAP1-201ENST00000297661 C17orf112F2Z3M2 114 aa12.9□□□□□ -0.34
UBAP1-201ENST00000297661 MAJINQ3KP22 176 aa12.9□□□□□ -0.34
UBAP1-201ENST00000297661 IGF2-ASQ6U949 168 aa12.9□□□□□ -0.34
UBAP1-201ENST00000297661 ZNF645Q8N7E2 425 aa12.9□□□□□ -0.34
UBAP1-201ENST00000297661 KCNS1Q96KK3 526 aa12.9□□□□□ -0.34
UBAP1-201ENST00000297661 CHODLQ9H9P2 273 aa12.9□□□□□ -0.34
UBAP1-201ENST00000297661 MRPS16Q9Y3D3 137 aaKnown RBP12.9□□□□□ -0.34
UBAP1-201ENST00000297661 VPS25Q9BRG1 176 aa12.9□□□□□ -0.35
UBAP1-201ENST00000297661 RNF24Q9Y225 148 aa12.9□□□□□ -0.35
UBAP1-201ENST00000297661 LINC00473A8K010 186 aa12.89□□□□□ -0.35
UBAP1-201ENST00000297661 TNFSF4P23510 183 aa12.89□□□□□ -0.35
UBAP1-201ENST00000297661 ZNF83P51522 516 aa12.89□□□□□ -0.35
UBAP1-201ENST00000297661 PRRX1P54821 245 aa12.89□□□□□ -0.35
UBAP1-201ENST00000297661 TGFBR3Q03167 851 aa12.89□□□□□ -0.35
UBAP1-201ENST00000297661 GABRA6Q16445 453 aa12.89□□□□□ -0.35
UBAP1-201ENST00000297661 DEFB109BQ30KR1 87 aa12.89□□□□□ -0.35
UBAP1-201ENST00000297661 KIAA1644Q3SXP7 199 aa12.89□□□□□ -0.35
UBAP1-201ENST00000297661 ST6GALNAC3Q8NDV1 305 aa12.89□□□□□ -0.35
UBAP1-201ENST00000297661 OR13A1Q8NGR1 328 aa12.89□□□□□ -0.35
UBAP1-201ENST00000297661 NAT8BQ9UHF3 227 aa12.89□□□□□ -0.35
UBAP1-201ENST00000297661 PSG11Q9UQ72 335 aa12.89□□□□□ -0.35
UBAP1-201ENST00000297661 A0A1W2PPV4 95 aa12.89□□□□□ -0.35
UBAP1-201ENST00000297661 IQCF6A8MYZ5 107 aa12.89□□□□□ -0.35
UBAP1-201ENST00000297661 K7EN84 100 aa12.89□□□□□ -0.35
UBAP1-201ENST00000297661 TIMM8AO60220 97 aaPredicted RBP12.89□□□□□ -0.35
UBAP1-201ENST00000297661 SMIM15Q7Z3B0 74 aa12.89□□□□□ -0.35
UBAP1-201ENST00000297661 MMD2Q8IY49 270 aa12.89□□□□□ -0.35
UBAP1-201ENST00000297661 INTS1Q8N201 2190 aaKnown RBP12.89□□□□□ -0.35
UBAP1-201ENST00000297661 NINJ1Q92982 152 aa12.89□□□□□ -0.35
UBAP1-201ENST00000297661 SPOCK3Q9BQ16 436 aa12.89□□□□□ -0.35
UBAP1-201ENST00000297661 LRRC30A6NM36 301 aa12.88□□□□□ -0.35
UBAP1-201ENST00000297661 EDDM3BP56851 147 aa12.88□□□□□ -0.35
UBAP1-201ENST00000297661 HTD2P86397 168 aa12.88□□□□□ -0.35
UBAP1-201ENST00000297661 FOXF2Q12947 444 aa12.88□□□□□ -0.35
UBAP1-201ENST00000297661 SFXN3Q9BWM7 321 aa12.88□□□□□ -0.35
UBAP1-201ENST00000297661 GNB1LQ9BYB4 327 aa12.88□□□□□ -0.35
UBAP1-201ENST00000297661 SPINK4O60575 86 aa12.88□□□□□ -0.35
UBAP1-201ENST00000297661 NIT1Q86X76 327 aa12.88□□□□□ -0.35
UBAP1-201ENST00000297661 OR8I2Q8N0Y5 310 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms