RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 TMSB15BA0A087X1C1 80 aa11.33□□□□□ -0.6
HPS3-201ENST00000296051 C10orf128Q5T292 105 aa11.33□□□□□ -0.6
HPS3-201ENST00000296051 DCTN5Q9BTE1 182 aa11.33□□□□□ -0.6
HPS3-201ENST00000296051 DEPPQ9NTK1 212 aa11.33□□□□□ -0.6
HPS3-201ENST00000296051 PLXNA3P51805 1871 aa11.33□□□□□ -0.6
HPS3-201ENST00000296051 ARHGAP21Q5T5U3 1957 aa11.32□□□□□ -0.6
HPS3-201ENST00000296051 IGKV1-27A0A075B6S5 117 aa11.32□□□□□ -0.6
HPS3-201ENST00000296051 E9PLN8 166 aa11.32□□□□□ -0.6
HPS3-201ENST00000296051 J3QR06 171 aa11.32□□□□□ -0.6
HPS3-201ENST00000296051 TFF1P04155 84 aa11.32□□□□□ -0.6
HPS3-201ENST00000296051 ID3Q02535 119 aa11.32□□□□□ -0.6
HPS3-201ENST00000296051 SRSF4Q08170 494 aaKnown RBP11.32□□□□□ -0.6
HPS3-201ENST00000296051 CENPVQ7Z7K6 275 aaPredicted RBP11.32□□□□□ -0.6
HPS3-201ENST00000296051 FGFBP3Q8TAT2 258 aa11.32□□□□□ -0.6
HPS3-201ENST00000296051 C7orf69Q9H7B7 122 aa11.32□□□□□ -0.6
HPS3-201ENST00000296051 DNAJC4Q9NNZ3 241 aa11.32□□□□□ -0.6
HPS3-201ENST00000296051 IGLV3-12A0A075B6K2 115 aa11.32□□□□□ -0.6
HPS3-201ENST00000296051 PRR31Q5SQ13 230 aa11.32□□□□□ -0.6
HPS3-201ENST00000296051 IBA57Q5T440 356 aaKnown RBP11.32□□□□□ -0.6
HPS3-201ENST00000296051 ZNF738Q8NE65 137 aa11.32□□□□□ -0.6
HPS3-201ENST00000296051 OR4D5Q8NGN0 318 aa11.32□□□□□ -0.6
HPS3-201ENST00000296051 WIPF3A6NGB9 483 aa11.32□□□□□ -0.6
HPS3-201ENST00000296051 UQCRFS1P47985 274 aa11.32□□□□□ -0.6
HPS3-201ENST00000296051 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.32□□□□□ -0.6
HPS3-201ENST00000296051 EAF1Q96JC9 268 aaPredicted RBP11.32□□□□□ -0.6
HPS3-201ENST00000296051 CHRDL1Q9BU40 450 aa11.32□□□□□ -0.6
HPS3-201ENST00000296051 GSX1Q9H4S2 264 aaPredicted RBP11.32□□□□□ -0.6
HPS3-201ENST00000296051 FOXA3P55318 350 aaPredicted RBP11.32□□□□□ -0.6
HPS3-201ENST00000296051 ZNRF1Q8ND25 227 aa11.32□□□□□ -0.6
HPS3-201ENST00000296051 PSMG3Q9BT73 122 aaPredicted RBP11.32□□□□□ -0.6
HPS3-201ENST00000296051 SELENOKQ9Y6D0 94 aa11.32□□□□□ -0.6
HPS3-201ENST00000296051 SCO2A0A1W2PP80 73 aa11.31□□□□□ -0.6
HPS3-201ENST00000296051 C19orf67A6NJJ6 358 aa11.31□□□□□ -0.6
HPS3-201ENST00000296051 PNKDQ8N490 385 aa11.31□□□□□ -0.6
HPS3-201ENST00000296051 NFAM1Q8NET5 270 aaPredicted RBP11.31□□□□□ -0.6
HPS3-201ENST00000296051 WDYHV1Q96HA8 205 aa11.31□□□□□ -0.6
HPS3-201ENST00000296051 C17orf98A8MV24 154 aa11.31□□□□□ -0.6
HPS3-201ENST00000296051 SERF1AO75920 110 aa11.31□□□□□ -0.6
HPS3-201ENST00000296051 ABLIM2Q6H8Q1 611 aa11.31□□□□□ -0.6
HPS3-201ENST00000296051 OR1L8Q8NGR8 309 aa11.31□□□□□ -0.6
HPS3-201ENST00000296051 NPCDR1Q9BY65 106 aa11.31□□□□□ -0.6
HPS3-201ENST00000296051 ARFGEF3Q5TH69 2177 aa11.31□□□□□ -0.6
HPS3-201ENST00000296051 LIPFP07098 398 aa11.31□□□□□ -0.6
HPS3-201ENST00000296051 COL8A1P27658 744 aa11.31□□□□□ -0.6
HPS3-201ENST00000296051 UNQ5815/PRO19632Q6UWF5 114 aa11.31□□□□□ -0.6
HPS3-201ENST00000296051 TMEM256Q8N2U0 113 aa11.31□□□□□ -0.6
HPS3-201ENST00000296051 VKORC1Q9BQB6 163 aa11.31□□□□□ -0.6
HPS3-201ENST00000296051 TMEM140Q9NV12 185 aa11.31□□□□□ -0.6
HPS3-201ENST00000296051 TMEM191AQ9H0A3 160 aa11.3□□□□□ -0.6
HPS3-201ENST00000296051 UQCR10Q9UDW1 63 aa11.3□□□□□ -0.6
HPS3-201ENST00000296051 PF4P02776 101 aa11.3□□□□□ -0.6
HPS3-201ENST00000296051 OR4A47Q6IF82 309 aa11.3□□□□□ -0.6
HPS3-201ENST00000296051 ZNF664Q8N3J9 261 aa11.3□□□□□ -0.6
HPS3-201ENST00000296051 OR4B1Q8NGF8 309 aa11.3□□□□□ -0.6
HPS3-201ENST00000296051 ASCL3Q9NQ33 180 aa11.3□□□□□ -0.6
HPS3-201ENST00000296051 TMEM56-RWDD3S4R434 201 aa11.3□□□□□ -0.6
HPS3-201ENST00000296051 PDPNQ86YL7 162 aa11.3□□□□□ -0.6
HPS3-201ENST00000296051 C1QL4Q86Z23 238 aa11.3□□□□□ -0.6
HPS3-201ENST00000296051 LURAP1LQ8IV03 231 aa11.3□□□□□ -0.6
HPS3-201ENST00000296051 TMEM54Q969K7 222 aa11.3□□□□□ -0.6
HPS3-201ENST00000296051 LOC102723996A0A087X1L8 192 aa11.3□□□□□ -0.6
HPS3-201ENST00000296051 IGHV2-70P01814 119 aa11.3□□□□□ -0.6
HPS3-201ENST00000296051 GATA2P23769 480 aaPredicted RBP11.3□□□□□ -0.6
HPS3-201ENST00000296051 OR8A1Q8NGG7 326 aa11.3□□□□□ -0.6
HPS3-201ENST00000296051 ZNF418Q8TF45 676 aaPredicted RBP11.3□□□□□ -0.6
HPS3-201ENST00000296051 GP6Q9HCN6 339 aa11.3□□□□□ -0.6
HPS3-201ENST00000296051 TMEM106BQ9NUM4 274 aa11.3□□□□□ -0.6
HPS3-201ENST00000296051 TBL2Q9Y4P3 447 aaKnown RBP11.3□□□□□ -0.6
HPS3-201ENST00000296051 A0A1B0GUS0 222 aa11.29□□□□□ -0.6
HPS3-201ENST00000296051 CLPSP04118 112 aa11.29□□□□□ -0.6
HPS3-201ENST00000296051 RPL27AP46776 148 aaKnown RBP11.29□□□□□ -0.6
HPS3-201ENST00000296051 FAM162BQ5T6X4 162 aa11.29□□□□□ -0.6
HPS3-201ENST00000296051 HCP5Q6MZN7 132 aa11.29□□□□□ -0.6
HPS3-201ENST00000296051 PARD6GQ9BYG4 376 aaPredicted RBP11.29□□□□□ -0.6
HPS3-201ENST00000296051 SNAI2O43623 268 aa11.29□□□□□ -0.6
HPS3-201ENST00000296051 FAM222BQ8WU58 562 aa11.29□□□□□ -0.6
HPS3-201ENST00000296051 LSM10Q969L4 123 aaKnown RBP11.29□□□□□ -0.6
HPS3-201ENST00000296051 IFNL4K9M1U5 179 aa11.29□□□□□ -0.6
HPS3-201ENST00000296051 RPP25LQ8N5L8 163 aaKnown RBP11.29□□□□□ -0.6
HPS3-201ENST00000296051 ZNF645Q8N7E2 425 aa11.29□□□□□ -0.6
HPS3-201ENST00000296051 PRNDQ9UKY0 176 aa11.29□□□□□ -0.6
HPS3-201ENST00000296051 CLDN16Q9Y5I7 305 aa11.29□□□□□ -0.6
HPS3-201ENST00000296051 IGHV3-35A0A0C4DH35 117 aa11.29□□□□□ -0.6
HPS3-201ENST00000296051 LYNX1G3V0Z9 82 aa11.29□□□□□ -0.6
HPS3-201ENST00000296051 RAMP3O60896 148 aa11.29□□□□□ -0.6
HPS3-201ENST00000296051 P01737 135 aa11.29□□□□□ -0.6
HPS3-201ENST00000296051 LYNX1P0DP58 116 aa11.29□□□□□ -0.6
HPS3-201ENST00000296051 IGHV1-2P23083 117 aa11.29□□□□□ -0.6
HPS3-201ENST00000296051 ZBTB34Q8NCN2 500 aa11.29□□□□□ -0.6
HPS3-201ENST00000296051 SLC25A17O43808 307 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 CGAP01215 116 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 FOXG1P55316 489 aaPredicted RBP11.28□□□□□ -0.6
HPS3-201ENST00000296051 LIME1Q9H400 295 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 LOC389332A0A1B0GUA5 103 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 CENPWQ5EE01 88 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 RBPMS2Q6ZRY4 209 aaKnown RBP11.28□□□□□ -0.6
HPS3-201ENST00000296051 DERL1Q9BUN8 251 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 CALYQ9NYX4 217 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 FAM90A10PA6NDY2 464 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 FAM90A18PA6NE21 464 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms