RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 MUC4Q99102 2169 aa10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 TRAV9-1A0A075B6T8 112 aa10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 CLDN14O95500 239 aa10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 RRN3P1Q2M238 152 aa10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 BCL6BQ8N143 479 aaPredicted RBP10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 TMEM256Q8N2U0 113 aa10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 KLF13Q9Y2Y9 288 aaPredicted RBP10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 CDKN1AP38936 164 aa10.06□□□□□ -0.8
SHROOM3-201ENST00000296043 C2orf82Q6UX34 121 aa10.06□□□□□ -0.8
SHROOM3-201ENST00000296043 ORMDL3Q8N138 153 aa10.06□□□□□ -0.8
SHROOM3-201ENST00000296043 RNF222A6NCQ9 220 aa10.06□□□□□ -0.8
SHROOM3-201ENST00000296043 M0R381 172 aa10.06□□□□□ -0.8
SHROOM3-201ENST00000296043 MOSP00540 346 aa10.06□□□□□ -0.8
SHROOM3-201ENST00000296043 ERVK11-1P61568 191 aa10.06□□□□□ -0.8
SHROOM3-201ENST00000296043 NCKAP5O14513 1909 aa10.06□□□□□ -0.8
SHROOM3-201ENST00000296043 C17orf51A8MQB3 221 aa10.06□□□□□ -0.8
SHROOM3-201ENST00000296043 LINC01387J3KSC0 135 aa10.06□□□□□ -0.8
SHROOM3-201ENST00000296043 GUSBP1Q15486 140 aa10.06□□□□□ -0.8
SHROOM3-201ENST00000296043 LAIR2Q6ISS4 152 aa10.06□□□□□ -0.8
SHROOM3-201ENST00000296043 HRKO00198 91 aa10.06□□□□□ -0.8
SHROOM3-201ENST00000296043 ZNHIT1O43257 154 aa10.06□□□□□ -0.8
SHROOM3-201ENST00000296043 A0A0J9YW62 118 aa10.06□□□□□ -0.8
SHROOM3-201ENST00000296043 UCP1P25874 307 aa10.06□□□□□ -0.8
SHROOM3-201ENST00000296043 FAM53BQ14153 422 aa10.06□□□□□ -0.8
SHROOM3-201ENST00000296043 MPC1Q9Y5U8 109 aa10.06□□□□□ -0.8
SHROOM3-201ENST00000296043 GGTLC3B5MD39 225 aa10.06□□□□□ -0.8
SHROOM3-201ENST00000296043 FAM231BA6NCW3 169 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 CD33P20138 364 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 IGFBP6P24592 240 aaPredicted RBP10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 RPL8P62917 257 aaKnown RBP10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 NFAM1Q8NET5 270 aaPredicted RBP10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 COQ2Q96H96 371 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 SCN10AQ9Y5Y9 1956 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 IFITM1P13164 125 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 SELENOTP62341 195 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 OR51G1Q8NGK1 321 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 TRBV5-7A0A0A0MS05 114 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 IGKV3D-20A0A0C4DH25 116 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 GPX1P07203 203 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 TPRX1Q8N7U7 411 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 DYNLRB2Q8TF09 96 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 IGHV3-64A0A075B6Q5 118 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 H3BRM9 83 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 GNG5P63218 68 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 FBXW9Q5XUX1 488 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 FGFRL1Q8N441 504 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 NRAPQ86VF7 1730 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 IL6RP08887 468 aaPredicted RBP10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 SLC25A15Q9Y619 301 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 CLEC1BQ9P126 229 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 LOC101059948A0A1B0GTJ6 334 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 TRACP01848 142 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 MRPS21P82921 87 aaKnown RBP10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 PSG9Q00887 426 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 C1QAP02745 245 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 WDR82Q6UXN9 313 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 TNFSF15O95150 251 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 GAGE2AQ6NT46 116 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 GTSCR1Q86UQ5 136 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 OR9G4Q8NGQ1 327 aa10.05□□□□□ -0.8
SHROOM3-201ENST00000296043 J3QT63 122 aa10.04□□□□□ -0.8
SHROOM3-201ENST00000296043 NPFFO15130 113 aa10.04□□□□□ -0.8
SHROOM3-201ENST00000296043 BTCP35070 178 aa10.04□□□□□ -0.8
SHROOM3-201ENST00000296043 SMIM20Q8N5G0 67 aa10.04□□□□□ -0.8
SHROOM3-201ENST00000296043 SRD5A2P31213 254 aa10.04□□□□□ -0.8
SHROOM3-201ENST00000296043 TICRRQ7Z2Z1 1910 aa10.04□□□□□ -0.8
SHROOM3-201ENST00000296043 TRPM7Q96QT4 1865 aa10.04□□□□□ -0.8
SHROOM3-201ENST00000296043 M0R2P5 195 aa10.04□□□□□ -0.8
SHROOM3-201ENST00000296043 BGLAPP02818 100 aa10.04□□□□□ -0.8
SHROOM3-201ENST00000296043 CNTFRP26992 372 aa10.04□□□□□ -0.8
SHROOM3-201ENST00000296043 ACTL10Q5JWF8 245 aa10.04□□□□□ -0.8
SHROOM3-201ENST00000296043 C1orf174Q8IYL3 243 aa10.04□□□□□ -0.8
SHROOM3-201ENST00000296043 FBXL15Q9H469 300 aa10.04□□□□□ -0.8
SHROOM3-201ENST00000296043 IGLV3-25P01717 112 aa10.04□□□□□ -0.8
SHROOM3-201ENST00000296043 IGKCP01834 107 aa10.04□□□□□ -0.8
SHROOM3-201ENST00000296043 LINC00305Q7Z4B0 112 aa10.04□□□□□ -0.8
SHROOM3-201ENST00000296043 ZAR1Q86SH2 424 aa10.04□□□□□ -0.8
SHROOM3-201ENST00000296043 NXT2Q9NPJ8 142 aaKnown RBP10.04□□□□□ -0.8
SHROOM3-201ENST00000296043 A0A1W2PRE2 83 aa10.04□□□□□ -0.8
SHROOM3-201ENST00000296043 IGLV3-27P01718 113 aa10.04□□□□□ -0.8
SHROOM3-201ENST00000296043 ERG28Q9UKR5 140 aa10.04□□□□□ -0.8
SHROOM3-201ENST00000296043 IGHV3OR16-12A0A075B7B8 117 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 SLC25A53Q5H9E4 307 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 CD200R1LQ6Q8B3 271 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 POLR3KQ9Y2Y1 108 aaPredicted RBP10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 CENPVL1A0A0U1RR11 272 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 CXCL12P48061 93 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 PAPPA-AS1Q5QFB9 102 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 RBBP6Q7Z6E9 1792 aaKnown RBP10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 RALGAPA2Q2PPJ7 1873 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 IGHV3-72A0A0B4J1Y9 119 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 CEACAM5P06731 702 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 FOXL2P58012 376 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 OR10J3Q5JRS4 329 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 FSCN3Q9NQT6 498 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 B5MCH6 92 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 PRRT4C9JH25 899 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 MKRN2OSH3BPM6 223 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 WFDC1Q9HC57 220 aa10.03□□□□□ -0.8
SHROOM3-201ENST00000296043 TOMM7Q9P0U1 55 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms