RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 ZNF207O43670 478 aaKnown RBP6.86□□□□□ -1.31
CNOT9-202ENST00000295701 FCER2P06734 321 aa6.86□□□□□ -1.31
CNOT9-202ENST00000295701 HLA-GP17693 338 aa6.86□□□□□ -1.31
CNOT9-202ENST00000295701 FCGR2BP31994 310 aaPredicted RBP6.86□□□□□ -1.31
CNOT9-202ENST00000295701 BMI1P35226 326 aa6.86□□□□□ -1.31
CNOT9-202ENST00000295701 OR2B8PP59922 312 aa6.86□□□□□ -1.31
CNOT9-202ENST00000295701 RPL8P62917 257 aaKnown RBP6.86□□□□□ -1.31
CNOT9-202ENST00000295701 ANKRD55Q3KP44 614 aa6.86□□□□□ -1.31
CNOT9-202ENST00000295701 ODF3L2Q3SX64 289 aa6.86□□□□□ -1.31
CNOT9-202ENST00000295701 TIMM50Q3ZCQ8 353 aa6.86□□□□□ -1.31
CNOT9-202ENST00000295701 HACD4Q5VWC8 232 aa6.86□□□□□ -1.31
CNOT9-202ENST00000295701 C22orf42Q6IC83 251 aa6.86□□□□□ -1.31
CNOT9-202ENST00000295701 CNIH2Q6PI25 160 aa6.86□□□□□ -1.31
CNOT9-202ENST00000295701 PLET1Q6UQ28 207 aa6.86□□□□□ -1.31
CNOT9-202ENST00000295701 VSTM2AQ8TAG5 236 aa6.86□□□□□ -1.31
CNOT9-202ENST00000295701 SECTM1Q8WVN6 248 aa6.86□□□□□ -1.31
CNOT9-202ENST00000295701 HSD17B10Q99714 261 aaKnown RBP6.86□□□□□ -1.31
CNOT9-202ENST00000295701 MRPL27Q9P0M9 148 aaKnown RBP6.86□□□□□ -1.31
CNOT9-202ENST00000295701 DYNC1H1Q14204 4646 aaKnown RBP6.86□□□□□ -1.31
CNOT9-202ENST00000295701 TRDV1A0A1B0GX56 115 aa6.85□□□□□ -1.31
CNOT9-202ENST00000295701 OR2T8A6NH00 312 aa6.85□□□□□ -1.31
CNOT9-202ENST00000295701 SULT1C2O00338 296 aa6.85□□□□□ -1.31
CNOT9-202ENST00000295701 SLC22A5O76082 557 aa6.85□□□□□ -1.31
CNOT9-202ENST00000295701 CTXN2P0C2S0 81 aa6.85□□□□□ -1.31
CNOT9-202ENST00000295701 HIST1H1BP16401 226 aaKnown RBP6.85□□□□□ -1.31
CNOT9-202ENST00000295701 MYL9P24844 172 aa6.85□□□□□ -1.31
CNOT9-202ENST00000295701 MFAP2P55001 183 aa6.85□□□□□ -1.31
CNOT9-202ENST00000295701 ZNF66Q6ZN08 573 aa6.85□□□□□ -1.31
CNOT9-202ENST00000295701 Q6ZWC4 215 aa6.85□□□□□ -1.31
CNOT9-202ENST00000295701 GVQW1Q8N7I0 195 aa6.85□□□□□ -1.31
CNOT9-202ENST00000295701 PHLDA1Q8WV24 401 aaPredicted RBP6.85□□□□□ -1.31
CNOT9-202ENST00000295701 MARC2Q969Z3 335 aa6.85□□□□□ -1.31
CNOT9-202ENST00000295701 RNF183Q96D59 192 aa6.85□□□□□ -1.31
CNOT9-202ENST00000295701 CHRDL1Q9BU40 450 aa6.85□□□□□ -1.31
CNOT9-202ENST00000295701 ZNF436Q9C0F3 470 aaPredicted RBP6.85□□□□□ -1.31
CNOT9-202ENST00000295701 VCXQ9H320 206 aa6.85□□□□□ -1.31
CNOT9-202ENST00000295701 HRASLSQ9HDD0 168 aa6.85□□□□□ -1.31
CNOT9-202ENST00000295701 BET1LQ9NYM9 111 aa6.85□□□□□ -1.31
CNOT9-202ENST00000295701 TP53TG1Q9Y2A0 90 aa6.85□□□□□ -1.31
CNOT9-202ENST00000295701 UPK2O00526 184 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 TGOLN2O43493 480 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 DHFRP00374 187 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 HRASP01112 189 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 GALP22466 123 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 FCGR2CP31995 323 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 RANBP1P43487 201 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 APOC4P55056 127 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 SLC25A24Q6NUK1 477 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 ZNF367Q7RTV3 350 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 APRG1Q8IVJ8 170 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 SLC38A6Q8IZM9 456 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 SPAG16Q8N0X2 631 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 OR5B3Q8NH48 314 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 TMEM190Q8WZ59 177 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 ZNF414Q96IQ9 312 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 CXorf58Q96LI9 332 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 CENPOQ9BU64 300 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 KRTAP9-3Q9BYQ3 159 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 DCSTAMPQ9H295 470 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 C5orf66Q9H5L9 145 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 ANXA10Q9UJ72 324 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 KLK5Q9Y337 293 aaPredicted RBP6.84□□□□□ -1.31
CNOT9-202ENST00000295701 UFC1Q9Y3C8 167 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 KIAA1109Q2LD37 5005 aa6.84□□□□□ -1.31
CNOT9-202ENST00000295701 RYR1P21817 5038 aa6.83□□□□□ -1.32
CNOT9-202ENST00000295701 TEX50A0A1B0GTY4 177 aa6.83□□□□□ -1.32
CNOT9-202ENST00000295701 UBE2CO00762 179 aa6.83□□□□□ -1.32
CNOT9-202ENST00000295701 TSPAN4O14817 238 aa6.83□□□□□ -1.32
CNOT9-202ENST00000295701 CTSDP07339 412 aaPredicted RBP6.83□□□□□ -1.32
CNOT9-202ENST00000295701 CLEC2LP0C7M8 214 aa6.83□□□□□ -1.32
CNOT9-202ENST00000295701 PTBP1P26599 531 aaKnown RBP eCLIP6.83□□□□□ -1.327e-12■■■■■ 43
CNOT9-202ENST00000295701 ELLP55199 621 aaPredicted RBP6.83□□□□□ -1.32
CNOT9-202ENST00000295701 FXYD4P59646 89 aa6.83□□□□□ -1.32
CNOT9-202ENST00000295701 GNG2P59768 71 aa6.83□□□□□ -1.32
CNOT9-202ENST00000295701 NANOS2P60321 138 aaKnown RBP6.83□□□□□ -1.32
CNOT9-202ENST00000295701 TBCEQ15813 527 aaPredicted RBP6.83□□□□□ -1.32
CNOT9-202ENST00000295701 STPG3Q8N7X2 389 aa6.83□□□□□ -1.32
CNOT9-202ENST00000295701 SYT8Q8NBV8 401 aa6.83□□□□□ -1.32
CNOT9-202ENST00000295701 OR5H6Q8NGV6 325 aa6.83□□□□□ -1.32
CNOT9-202ENST00000295701 OR4A5Q8NH83 315 aa6.83□□□□□ -1.32
CNOT9-202ENST00000295701 LGALS14Q8TCE9 139 aa6.83□□□□□ -1.32
CNOT9-202ENST00000295701 SPAG8Q99932 426 aaPredicted RBP6.83□□□□□ -1.32
CNOT9-202ENST00000295701 C20orf24Q9BUV8 137 aa6.83□□□□□ -1.32
CNOT9-202ENST00000295701 SLC5A7Q9GZV3 580 aa6.83□□□□□ -1.32
CNOT9-202ENST00000295701 MAP6D1Q9H9H5 199 aa6.83□□□□□ -1.32
CNOT9-202ENST00000295701 NDUFB11Q9NX14 153 aa6.83□□□□□ -1.32
CNOT9-202ENST00000295701 DAPK2Q9UIK4 370 aa6.83□□□□□ -1.32
CNOT9-202ENST00000295701 PKHD1P08F94 4074 aa6.83□□□□□ -1.32
CNOT9-202ENST00000295701 IGKV3-7A0A075B6H7 116 aa6.82□□□□□ -1.32
CNOT9-202ENST00000295701 IGHV3-49A0A0A0MS15 119 aa6.82□□□□□ -1.32
CNOT9-202ENST00000295701 PPYP01298 95 aa6.82□□□□□ -1.32
CNOT9-202ENST00000295701 OR13C7P0DN81 318 aa6.82□□□□□ -1.32
CNOT9-202ENST00000295701 TFPI2P48307 235 aa6.82□□□□□ -1.32
CNOT9-202ENST00000295701 ARPC4P59998 168 aa6.82□□□□□ -1.32
CNOT9-202ENST00000295701 WT1-ASQ06250 92 aa6.82□□□□□ -1.32
CNOT9-202ENST00000295701 ARL6IP1Q15041 203 aa6.82□□□□□ -1.32
CNOT9-202ENST00000295701 BEST4Q8NFU0 473 aa6.82□□□□□ -1.32
CNOT9-202ENST00000295701 OR13F1Q8NGS4 319 aa6.82□□□□□ -1.32
CNOT9-202ENST00000295701 OR51H1Q8NH63 302 aa6.82□□□□□ -1.32
CNOT9-202ENST00000295701 CD300LFQ8TDQ1 290 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms