RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 LINC00614P0C842 121 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 RNF151Q2KHN1 245 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 SGK494Q96LW2 274 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 RNF2Q99496 336 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 PILRBQ9UKJ0 227 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 LAMTOR2Q9Y2Q5 125 aa10.68□□□□□ -0.7
COL8A1-202ENST00000273342 TET2Q6N021 2002 aaPredicted RBP10.67□□□□□ -0.7
COL8A1-202ENST00000273342 IGHV3OR15-7A0A075B7D8 119 aa10.67□□□□□ -0.7
COL8A1-202ENST00000273342 GPR6P46095 362 aaPredicted RBP10.67□□□□□ -0.7
COL8A1-202ENST00000273342 Q56UQ5 140 aa10.67□□□□□ -0.7
COL8A1-202ENST00000273342 HES3Q5TGS1 186 aa10.67□□□□□ -0.7
COL8A1-202ENST00000273342 ZBTB34Q8NCN2 500 aa10.67□□□□□ -0.7
COL8A1-202ENST00000273342 OR4B1Q8NGF8 309 aa10.67□□□□□ -0.7
COL8A1-202ENST00000273342 RAB1CQ92928 201 aa10.67□□□□□ -0.7
COL8A1-202ENST00000273342 HEATR1Q9H583 2144 aaKnown RBP10.67□□□□□ -0.7
COL8A1-202ENST00000273342 DPRXA6NFQ7 191 aa10.67□□□□□ -0.7
COL8A1-202ENST00000273342 DUTP33316 252 aaKnown RBP10.67□□□□□ -0.7
COL8A1-202ENST00000273342 ATP1A1-AS1Q5TC04 95 aa10.67□□□□□ -0.7
COL8A1-202ENST00000273342 KLF14Q8TD94 323 aaPredicted RBP10.67□□□□□ -0.7
COL8A1-202ENST00000273342 FAM168AQ92567 244 aa10.67□□□□□ -0.7
COL8A1-202ENST00000273342 BCL2L2Q92843 193 aaPredicted RBP10.67□□□□□ -0.7
COL8A1-202ENST00000273342 GP6Q9HCN6 339 aa10.67□□□□□ -0.7
COL8A1-202ENST00000273342 TMEM140Q9NV12 185 aa10.67□□□□□ -0.7
COL8A1-202ENST00000273342 PPP1R14DQ9NXH3 145 aa10.67□□□□□ -0.7
COL8A1-202ENST00000273342 SPENQ96T58 3664 aaKnown RBP10.67□□□□□ -0.7
COL8A1-202ENST00000273342 IGLC2P0DOY2 106 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 IGLC3P0DOY3 106 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 ERVK-16P61578 105 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 PRR27Q6MZM9 219 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 GMPPAQ96IJ6 420 aaPredicted RBP10.66□□□□□ -0.7
COL8A1-202ENST00000273342 PLEKHA3Q9HB20 300 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 NPVFQ9HCQ7 196 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 TCF19Q9Y242 345 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 LAMTOR5O43504 91 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 IGHV3-48P01763 117 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 ZNF134P52741 427 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 RHOBP62745 196 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 DCAF12Q5T6F0 453 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 FBXW9Q5XUX1 488 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 PMS2CLQ68D20 193 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 TEPPQ6URK8 271 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 SSBP4Q9BWG4 385 aaPredicted RBP10.66□□□□□ -0.7
COL8A1-202ENST00000273342 CLCF1Q9UBD9 225 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 RNF24Q9Y225 148 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 BDP1A6H8Y1 2624 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 SPINT2O43291 252 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 RELBQ01201 579 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 SLC35E4Q6ICL7 350 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 C1orf229Q6ZS94 237 aaPredicted RBP10.66□□□□□ -0.7
COL8A1-202ENST00000273342 BORCS7Q96B45 105 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 UQCR10Q9UDW1 63 aa10.66□□□□□ -0.7
COL8A1-202ENST00000273342 TIMM8BQ9Y5J9 83 aaPredicted RBP10.66□□□□□ -0.7
COL8A1-202ENST00000273342 BMPR1BO00238 502 aa10.65□□□□□ -0.7
COL8A1-202ENST00000273342 CER1O95813 267 aa10.65□□□□□ -0.7
COL8A1-202ENST00000273342 CA2P00918 260 aa10.65□□□□□ -0.7
COL8A1-202ENST00000273342 CD24P25063 80 aa10.65□□□□□ -0.7
COL8A1-202ENST00000273342 ZNF766Q5HY98 468 aa10.65□□□□□ -0.7
COL8A1-202ENST00000273342 TMEM136Q6ZRR5 245 aa10.65□□□□□ -0.7
COL8A1-202ENST00000273342 LHFPL4Q7Z7J7 247 aa10.65□□□□□ -0.7
COL8A1-202ENST00000273342 ZNRF1Q8ND25 227 aa10.65□□□□□ -0.7
COL8A1-202ENST00000273342 KCNS1Q96KK3 526 aa10.65□□□□□ -0.7
COL8A1-202ENST00000273342 CDX2Q99626 313 aaPredicted RBP10.65□□□□□ -0.7
COL8A1-202ENST00000273342 NBASA2RRP1 2371 aa10.65□□□□□ -0.7
COL8A1-202ENST00000273342 TIMM8AO60220 97 aaPredicted RBP10.65□□□□□ -0.71
COL8A1-202ENST00000273342 ZNF324O75467 553 aaPredicted RBP10.65□□□□□ -0.71
COL8A1-202ENST00000273342 CYC1P08574 325 aa10.65□□□□□ -0.71
COL8A1-202ENST00000273342 VDAC2P45880 294 aaPredicted RBP10.65□□□□□ -0.71
COL8A1-202ENST00000273342 CAMPP49913 170 aa10.65□□□□□ -0.71
COL8A1-202ENST00000273342 Q0VG73 95 aa10.65□□□□□ -0.71
COL8A1-202ENST00000273342 SLAQ13239 276 aa10.65□□□□□ -0.71
COL8A1-202ENST00000273342 PMCHL1Q16048 86 aa10.65□□□□□ -0.71
COL8A1-202ENST00000273342 TIGITQ495A1 244 aa10.65□□□□□ -0.71
COL8A1-202ENST00000273342 ACP7Q6ZNF0 438 aa10.65□□□□□ -0.71
COL8A1-202ENST00000273342 C11orf53Q8IXP5 236 aa10.65□□□□□ -0.71
COL8A1-202ENST00000273342 SFXN3Q9BWM7 321 aa10.65□□□□□ -0.71
COL8A1-202ENST00000273342 CLEC7AQ9BXN2 247 aa10.65□□□□□ -0.71
COL8A1-202ENST00000273342 DUSP13Q9UII6 198 aa10.65□□□□□ -0.71
COL8A1-202ENST00000273342 A0A1W2PN81 502 aa10.64□□□□□ -0.71
COL8A1-202ENST00000273342 CTRLP40313 264 aa10.64□□□□□ -0.71
COL8A1-202ENST00000273342 MRPL49Q13405 166 aaKnown RBP10.64□□□□□ -0.71
COL8A1-202ENST00000273342 ETFRF1Q6IPR1 90 aa10.64□□□□□ -0.71
COL8A1-202ENST00000273342 C6orf15Q6UXA7 325 aaPredicted RBP10.64□□□□□ -0.71
COL8A1-202ENST00000273342 NIT1Q86X76 327 aa10.64□□□□□ -0.71
COL8A1-202ENST00000273342 CNEP1R1Q8N9A8 125 aa10.64□□□□□ -0.71
COL8A1-202ENST00000273342 TSKUQ8WUA8 353 aa10.64□□□□□ -0.71
COL8A1-202ENST00000273342 NANOS1Q8WY41 292 aaKnown RBP10.64□□□□□ -0.71
COL8A1-202ENST00000273342 S1PR3Q99500 378 aa10.64□□□□□ -0.71
COL8A1-202ENST00000273342 ASCL3Q9NQ33 180 aa10.64□□□□□ -0.71
COL8A1-202ENST00000273342 CDC42EP3Q9UKI2 254 aa10.64□□□□□ -0.71
COL8A1-202ENST00000273342 PCSK5Q92824 1860 aa10.64□□□□□ -0.71
COL8A1-202ENST00000273342 NPY1RP25929 384 aa10.64□□□□□ -0.71
COL8A1-202ENST00000273342 RPP30P78346 268 aaKnown RBP10.64□□□□□ -0.71
COL8A1-202ENST00000273342 FAM201AQ5SY85 155 aa10.64□□□□□ -0.71
COL8A1-202ENST00000273342 IBA57Q5T440 356 aaKnown RBP10.64□□□□□ -0.71
COL8A1-202ENST00000273342 WDR82Q6UXN9 313 aa10.64□□□□□ -0.71
COL8A1-202ENST00000273342 CD177Q8N6Q3 437 aa10.64□□□□□ -0.71
COL8A1-202ENST00000273342 SLC35D1Q9NTN3 355 aa10.64□□□□□ -0.71
COL8A1-202ENST00000273342 SLC45A2Q9UMX9 530 aa10.64□□□□□ -0.71
COL8A1-202ENST00000273342 PIEZO2Q9H5I5 2752 aa10.64□□□□□ -0.71
COL8A1-202ENST00000273342 ZNF318Q5VUA4 2279 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms