RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 ABCA4P78363 2273 aa9.74□□□□□ -0.85
VPS33A-201ENST00000267199 IGHV3-72A0A0B4J1Y9 119 aa9.74□□□□□ -0.85
VPS33A-201ENST00000267199 ZNF716A6NP11 495 aa9.74□□□□□ -0.85
VPS33A-201ENST00000267199 C12orf77C9JDV5 145 aa9.74□□□□□ -0.85
VPS33A-201ENST00000267199 IL6RP08887 468 aaPredicted RBP9.74□□□□□ -0.85
VPS33A-201ENST00000267199 WBP1Q96G27 269 aa9.74□□□□□ -0.85
VPS33A-201ENST00000267199 PMCHL2Q9BQD1 86 aa9.74□□□□□ -0.85
VPS33A-201ENST00000267199 WDR87Q6ZQQ6 2873 aa9.74□□□□□ -0.85
VPS33A-201ENST00000267199 C8orf88P0DMB2 117 aa9.74□□□□□ -0.85
VPS33A-201ENST00000267199 PTGDSP41222 190 aa9.74□□□□□ -0.85
VPS33A-201ENST00000267199 PRR31Q5SQ13 230 aa9.74□□□□□ -0.85
VPS33A-201ENST00000267199 NABP1Q96AH0 204 aa9.74□□□□□ -0.85
VPS33A-201ENST00000267199 C2orf88Q9BSF0 95 aa9.74□□□□□ -0.85
VPS33A-201ENST00000267199 DCTN5Q9BTE1 182 aa9.74□□□□□ -0.85
VPS33A-201ENST00000267199 DEPPQ9NTK1 212 aa9.74□□□□□ -0.85
VPS33A-201ENST00000267199 CRYGSP22914 178 aa9.74□□□□□ -0.85
VPS33A-201ENST00000267199 HSPE1P61604 102 aaKnown RBP9.74□□□□□ -0.85
VPS33A-201ENST00000267199 RPL39P5Q59GN2 51 aa9.74□□□□□ -0.85
VPS33A-201ENST00000267199 RPP25LQ8N5L8 163 aaKnown RBP9.74□□□□□ -0.85
VPS33A-201ENST00000267199 LRTM2Q8N967 370 aa9.74□□□□□ -0.85
VPS33A-201ENST00000267199 MS4A5Q9H3V2 200 aa9.74□□□□□ -0.85
VPS33A-201ENST00000267199 PNRC2Q9NPJ4 139 aaKnown RBP9.74□□□□□ -0.85
VPS33A-201ENST00000267199 BTF3P20290 206 aaKnown RBP9.73□□□□□ -0.85
VPS33A-201ENST00000267199 CD40P25942 277 aa9.73□□□□□ -0.85
VPS33A-201ENST00000267199 CCL8P80075 99 aa9.73□□□□□ -0.85
VPS33A-201ENST00000267199 RND2P52198 227 aa9.73□□□□□ -0.85
VPS33A-201ENST00000267199 SCGB1D4Q6XE38 83 aa9.73□□□□□ -0.85
VPS33A-201ENST00000267199 GBGT1Q8N5D6 347 aa9.73□□□□□ -0.85
VPS33A-201ENST00000267199 OCC1Q8TAD7 63 aa9.73□□□□□ -0.85
VPS33A-201ENST00000267199 DERL1Q9BUN8 251 aa9.73□□□□□ -0.85
VPS33A-201ENST00000267199 PRDM13Q9H4Q3 707 aa9.73□□□□□ -0.85
VPS33A-201ENST00000267199 IGKV1-27A0A075B6S5 117 aa9.73□□□□□ -0.85
VPS33A-201ENST00000267199 ZNF324BQ6AW86 544 aaPredicted RBP9.73□□□□□ -0.85
VPS33A-201ENST00000267199 ITLN1Q8WWA0 313 aa9.73□□□□□ -0.85
VPS33A-201ENST00000267199 TMEM70Q9BUB7 260 aa9.73□□□□□ -0.85
VPS33A-201ENST00000267199 A0A1B0GUS0 222 aa9.73□□□□□ -0.85
VPS33A-201ENST00000267199 J3KRW8 73 aa9.73□□□□□ -0.85
VPS33A-201ENST00000267199 RAMP3O60896 148 aa9.73□□□□□ -0.85
VPS33A-201ENST00000267199 IGHV2-5P01817 119 aa9.73□□□□□ -0.85
VPS33A-201ENST00000267199 HLA-DRB1P01911 266 aa9.73□□□□□ -0.85
VPS33A-201ENST00000267199 IGFBP2P18065 325 aa9.73□□□□□ -0.85
VPS33A-201ENST00000267199 ACSF3Q4G176 576 aaPredicted RBP9.73□□□□□ -0.85
VPS33A-201ENST00000267199 CCL13Q99616 98 aa9.73□□□□□ -0.85
VPS33A-201ENST00000267199 ZNF71Q9NQZ8 489 aaPredicted RBP9.73□□□□□ -0.85
VPS33A-201ENST00000267199 DCAF16Q9NXF7 216 aa9.73□□□□□ -0.85
VPS33A-201ENST00000267199 ZFP30Q9Y2G7 519 aa9.73□□□□□ -0.85
VPS33A-201ENST00000267199 FOXG1P55316 489 aaPredicted RBP9.72□□□□□ -0.85
VPS33A-201ENST00000267199 STXBP6Q8NFX7 210 aa9.72□□□□□ -0.85
VPS33A-201ENST00000267199 MBD3L1Q8WWY6 194 aa9.72□□□□□ -0.85
VPS33A-201ENST00000267199 TRBV9A0A0B4J1U6 114 aa9.72□□□□□ -0.85
VPS33A-201ENST00000267199 RPL7P18124 248 aaKnown RBP9.72□□□□□ -0.85
VPS33A-201ENST00000267199 ACP1P24666 158 aa9.72□□□□□ -0.85
VPS33A-201ENST00000267199 SPSB3Q6PJ21 355 aa9.72□□□□□ -0.85
VPS33A-201ENST00000267199 RASL11BQ9BPW5 248 aa9.72□□□□□ -0.85
VPS33A-201ENST00000267199 TMEM208Q9BTX3 173 aa9.72□□□□□ -0.85
VPS33A-201ENST00000267199 SSBP4Q9BWG4 385 aaPredicted RBP9.72□□□□□ -0.85
VPS33A-201ENST00000267199 SEMA5BQ9P283 1151 aa9.72□□□□□ -0.85
VPS33A-201ENST00000267199 FABP2P12104 132 aa9.72□□□□□ -0.85
VPS33A-201ENST00000267199 TM4SF20Q53R12 229 aa9.72□□□□□ -0.85
VPS33A-201ENST00000267199 TMEM242Q9NWH2 141 aa9.72□□□□□ -0.85
VPS33A-201ENST00000267199 HYPMO75409 117 aa9.72□□□□□ -0.85
VPS33A-201ENST00000267199 C1orf194Q5T5A4 169 aa9.72□□□□□ -0.85
VPS33A-201ENST00000267199 MIR17HGQ75NE6 70 aa9.72□□□□□ -0.85
VPS33A-201ENST00000267199 NIT1Q86X76 327 aa9.72□□□□□ -0.85
VPS33A-201ENST00000267199 PLPPR1Q8TBJ4 325 aa9.72□□□□□ -0.85
VPS33A-201ENST00000267199 PRR33A8MZF0 331 aa9.71□□□□□ -0.85
VPS33A-201ENST00000267199 CA1P00915 261 aaPredicted RBP9.71□□□□□ -0.85
VPS33A-201ENST00000267199 REG1AP05451 166 aa9.71□□□□□ -0.85
VPS33A-201ENST00000267199 LYL1P12980 280 aa9.71□□□□□ -0.85
VPS33A-201ENST00000267199 NRN1LQ496H8 165 aa9.71□□□□□ -0.85
VPS33A-201ENST00000267199 LDLRAD2Q5SZI1 272 aa9.71□□□□□ -0.85
VPS33A-201ENST00000267199 UNQ5815/PRO19632Q6UWF5 114 aa9.71□□□□□ -0.85
VPS33A-201ENST00000267199 A8MWP6 167 aa9.71□□□□□ -0.86
VPS33A-201ENST00000267199 TFF1P04155 84 aa9.71□□□□□ -0.86
VPS33A-201ENST00000267199 FAM90A2PQ658T7 463 aa9.71□□□□□ -0.86
VPS33A-201ENST00000267199 GNG7O60262 68 aa9.71□□□□□ -0.86
VPS33A-201ENST00000267199 BEND2Q8NDZ0 799 aa9.71□□□□□ -0.86
VPS33A-201ENST00000267199 SRSF12Q8WXF0 261 aaKnown RBP9.71□□□□□ -0.86
VPS33A-201ENST00000267199 NPIPB3Q92617 1050 aa9.71□□□□□ -0.86
VPS33A-201ENST00000267199 ONECUT1Q9UBC0 465 aa9.71□□□□□ -0.86
VPS33A-201ENST00000267199 PINLYPA6NC86 204 aa9.7□□□□□ -0.86
VPS33A-201ENST00000267199 ZNRF1Q8ND25 227 aa9.7□□□□□ -0.86
VPS33A-201ENST00000267199 SRSF9Q13242 221 aaKnown RBP eCLIP9.7□□□□□ -0.86
VPS33A-201ENST00000267199 TEX38Q6PEX7 206 aa9.7□□□□□ -0.86
VPS33A-201ENST00000267199 CALYQ9NYX4 217 aa9.7□□□□□ -0.86
VPS33A-201ENST00000267199 CELA3BP08861 270 aa9.7□□□□□ -0.86
VPS33A-201ENST00000267199 CFPP27918 469 aa9.7□□□□□ -0.86
VPS33A-201ENST00000267199 PSG7Q13046 419 aa9.7□□□□□ -0.86
VPS33A-201ENST00000267199 C10orf91Q5T1B1 145 aa9.7□□□□□ -0.86
VPS33A-201ENST00000267199 PET117Q6UWS5 81 aa9.7□□□□□ -0.86
VPS33A-201ENST00000267199 A0A1B0GW64 132 aa9.7□□□□□ -0.86
VPS33A-201ENST00000267199 E9PLN8 166 aa9.7□□□□□ -0.86
VPS33A-201ENST00000267199 H3BVH4 76 aa9.7□□□□□ -0.86
VPS33A-201ENST00000267199 TNFSF13O75888 250 aa9.7□□□□□ -0.86
VPS33A-201ENST00000267199 LHX2P50458 406 aa9.7□□□□□ -0.86
VPS33A-201ENST00000267199 NMSQ5H8A3 153 aa9.7□□□□□ -0.86
VPS33A-201ENST00000267199 PCSK4Q6UW60 755 aa9.7□□□□□ -0.86
VPS33A-201ENST00000267199 GUCD1Q96NT3 240 aa9.7□□□□□ -0.86
VPS33A-201ENST00000267199 SNHG12Q9BXW3 62 aa9.7□□□□□ -0.86
VPS33A-201ENST00000267199 TNFRSF19Q9NS68 423 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms