RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 GATAD1Q8WUU5 269 aa9.7□□□□□ -0.86
CLSTN3-201ENST00000266546 PNRC2Q9NPJ4 139 aaKnown RBP9.7□□□□□ -0.86
CLSTN3-201ENST00000266546 A0A1W2PNU3 283 aaPredicted RBP9.7□□□□□ -0.86
CLSTN3-201ENST00000266546 SCO2A0A1W2PP80 73 aa9.7□□□□□ -0.86
CLSTN3-201ENST00000266546 PGPEP1LA6NFU8 196 aa9.7□□□□□ -0.86
CLSTN3-201ENST00000266546 IFITM10A6NMD0 228 aa9.7□□□□□ -0.86
CLSTN3-201ENST00000266546 CNIH1O95406 144 aa9.7□□□□□ -0.86
CLSTN3-201ENST00000266546 AMY1AP04745 511 aa9.7□□□□□ -0.86
CLSTN3-201ENST00000266546 CEBPDP49716 269 aaPredicted RBP9.7□□□□□ -0.86
CLSTN3-201ENST00000266546 GNB1P62873 340 aa9.7□□□□□ -0.86
CLSTN3-201ENST00000266546 HGFACQ04756 655 aa9.7□□□□□ -0.86
CLSTN3-201ENST00000266546 DOLPP1Q86YN1 238 aa9.7□□□□□ -0.86
CLSTN3-201ENST00000266546 PRDM13Q9H4Q3 707 aa9.7□□□□□ -0.86
CLSTN3-201ENST00000266546 PRNDQ9UKY0 176 aa9.7□□□□□ -0.86
CLSTN3-201ENST00000266546 LAMTOR2Q9Y2Q5 125 aa9.7□□□□□ -0.86
CLSTN3-201ENST00000266546 IGKV1-27A0A075B6S5 117 aa9.7□□□□□ -0.86
CLSTN3-201ENST00000266546 CENPWQ5EE01 88 aa9.7□□□□□ -0.86
CLSTN3-201ENST00000266546 OR2T6Q8NHC8 308 aa9.7□□□□□ -0.86
CLSTN3-201ENST00000266546 ZNF581Q9P0T4 197 aa9.7□□□□□ -0.86
CLSTN3-201ENST00000266546 CDPF1Q6NVV7 123 aa9.69□□□□□ -0.86
CLSTN3-201ENST00000266546 ABHD12Q8N2K0 398 aa9.69□□□□□ -0.86
CLSTN3-201ENST00000266546 TMEM256Q8N2U0 113 aa9.69□□□□□ -0.86
CLSTN3-201ENST00000266546 LYPD6BQ8NI32 183 aa9.69□□□□□ -0.86
CLSTN3-201ENST00000266546 TMEM210A6NLX4 147 aa9.69□□□□□ -0.86
CLSTN3-201ENST00000266546 TNFSF13O75888 250 aa9.69□□□□□ -0.86
CLSTN3-201ENST00000266546 COL8A1P27658 744 aa9.69□□□□□ -0.86
CLSTN3-201ENST00000266546 ZNF137PP52743 207 aa9.69□□□□□ -0.86
CLSTN3-201ENST00000266546 GABRA6Q16445 453 aa9.69□□□□□ -0.86
CLSTN3-201ENST00000266546 SFXN3Q9BWM7 321 aa9.69□□□□□ -0.86
CLSTN3-201ENST00000266546 HIF1ANQ9NWT6 349 aa9.69□□□□□ -0.86
CLSTN3-201ENST00000266546 PLCE1Q9P212 2302 aa9.69□□□□□ -0.86
CLSTN3-201ENST00000266546 IGFL3Q6UXB1 125 aa9.69□□□□□ -0.86
CLSTN3-201ENST00000266546 NABP1Q96AH0 204 aa9.69□□□□□ -0.86
CLSTN3-201ENST00000266546 HSPB8Q9UJY1 196 aa9.69□□□□□ -0.86
CLSTN3-201ENST00000266546 SLC25A34Q6PIV7 304 aa9.68□□□□□ -0.86
CLSTN3-201ENST00000266546 OR5P3Q8WZ94 311 aa9.68□□□□□ -0.86
CLSTN3-201ENST00000266546 TMEM208Q9BTX3 173 aa9.68□□□□□ -0.86
CLSTN3-201ENST00000266546 REPIN1Q9BWE0 567 aaKnown RBP9.68□□□□□ -0.86
CLSTN3-201ENST00000266546 UBTD1Q9HAC8 227 aa9.68□□□□□ -0.86
CLSTN3-201ENST00000266546 NRN1Q9NPD7 142 aa9.68□□□□□ -0.86
CLSTN3-201ENST00000266546 MSRB2Q9Y3D2 182 aa9.68□□□□□ -0.86
CLSTN3-201ENST00000266546 A6NDN8 102 aa9.68□□□□□ -0.86
CLSTN3-201ENST00000266546 LEPROTL1O95214 131 aa9.68□□□□□ -0.86
CLSTN3-201ENST00000266546 PPOXP50336 477 aa9.68□□□□□ -0.86
CLSTN3-201ENST00000266546 TMEM108Q6UXF1 575 aa9.68□□□□□ -0.86
CLSTN3-201ENST00000266546 TRAV9-1A0A075B6T8 112 aa9.68□□□□□ -0.86
CLSTN3-201ENST00000266546 VMA21Q3ZAQ7 101 aa9.68□□□□□ -0.86
CLSTN3-201ENST00000266546 C10orf113Q5VZT2 155 aa9.68□□□□□ -0.86
CLSTN3-201ENST00000266546 ZNF826PQ6ZT77 177 aa9.68□□□□□ -0.86
CLSTN3-201ENST00000266546 NHLRC2Q8NBF2 726 aa9.68□□□□□ -0.86
CLSTN3-201ENST00000266546 C1QTNF5Q9BXJ0 243 aa9.68□□□□□ -0.86
CLSTN3-201ENST00000266546 SPRR3Q9UBC9 169 aa9.68□□□□□ -0.86
CLSTN3-201ENST00000266546 TRANK1O15050 2925 aa9.68□□□□□ -0.86
CLSTN3-201ENST00000266546 GAGE10A6NGK3 116 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 RHBDL1O75783 438 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 LY6DQ14210 128 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 ACSF3Q4G176 576 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 Q6ZS92 163 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 FAM19A2Q8N3H0 131 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 RNASEH2CQ8TDP1 164 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 SNHG12Q9BXW3 62 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 PPP1R14DQ9NXH3 145 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 TCF19Q9Y242 345 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 PPIHO43447 177 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 CD3EP07766 207 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 CRYGSP22914 178 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 OTX1P32242 354 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 VWA1Q6PCB0 445 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 SPACA3Q8IXA5 215 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 STPG3Q8N7X2 389 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 OR1B1Q8NGR6 318 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 SSBP3Q9BWW4 388 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 C17orf98A8MV24 154 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 A8MWL6 223 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 CD33P20138 364 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 MMDQ15546 238 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 ACTL10Q5JWF8 245 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 IGFL2Q6UWQ7 119 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 PAXXQ9BUH6 204 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 TMEM140Q9NV12 185 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 OR51B2Q9Y5P1 312 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 LINC00614P0C842 121 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 C5orf24Q7Z6I8 188 aa9.67□□□□□ -0.86
CLSTN3-201ENST00000266546 MAS1LP35410 378 aa9.66□□□□□ -0.86
CLSTN3-201ENST00000266546 TDGF1P3P51864 188 aa9.66□□□□□ -0.86
CLSTN3-201ENST00000266546 LINC01551Q86U37 167 aa9.66□□□□□ -0.86
CLSTN3-201ENST00000266546 RRHO14718 337 aa9.66□□□□□ -0.86
CLSTN3-201ENST00000266546 PFN1P07737 140 aaKnown RBP9.66□□□□□ -0.86
CLSTN3-201ENST00000266546 BTF3P20290 206 aaKnown RBP9.66□□□□□ -0.86
CLSTN3-201ENST00000266546 S100A7P31151 101 aa9.66□□□□□ -0.86
CLSTN3-201ENST00000266546 VKORC1L1Q8N0U8 176 aa9.66□□□□□ -0.86
CLSTN3-201ENST00000266546 OR8B3Q8NGG8 313 aa9.66□□□□□ -0.86
CLSTN3-201ENST00000266546 OCC1Q8TAD7 63 aa9.66□□□□□ -0.86
CLSTN3-201ENST00000266546 FAM57AQ8TBR7 257 aa9.66□□□□□ -0.86
CLSTN3-201ENST00000266546 ABHD17AQ96GS6 310 aa9.66□□□□□ -0.86
CLSTN3-201ENST00000266546 OR8B2Q96RD0 313 aa9.66□□□□□ -0.86
CLSTN3-201ENST00000266546 AGMATQ9BSE5 352 aa9.66□□□□□ -0.86
CLSTN3-201ENST00000266546 LIME1Q9H400 295 aa9.66□□□□□ -0.86
CLSTN3-201ENST00000266546 FER1L5A0AVI2 2057 aa9.66□□□□□ -0.86
CLSTN3-201ENST00000266546 PRDX2P32119 198 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms