RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 CHD8Q9HCK8 2581 aa7.31□□□□□ -1.24
VAPB-201ENST00000265619 M0R2Z0 102 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 PDE6DO43924 150 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 IGKV3-11P04433 115 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 PATE4P0C8F1 98 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 RBM11P57052 281 aaKnown RBP7.3□□□□□ -1.24
VAPB-201ENST00000265619 UBE2G1P62253 170 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 RPL31P62899 125 aaKnown RBP7.3□□□□□ -1.24
VAPB-201ENST00000265619 RPL8P62917 257 aaKnown RBP7.3□□□□□ -1.24
VAPB-201ENST00000265619 FAM120AOSQ5T036 256 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 FAM53AQ6NSI3 398 aaPredicted RBP7.3□□□□□ -1.24
VAPB-201ENST00000265619 FAM168AQ92567 244 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 OR1A1Q9P1Q5 309 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 TNRC6AQ8NDV7 1962 aaKnown RBP7.3□□□□□ -1.24
VAPB-201ENST00000265619 A0A1B0GV72 72 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 TCTAP57738 103 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 TMEM211Q6ICI0 200 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 SLC35E4Q6ICL7 350 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 WDR82Q6UXN9 313 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 C19orf35Q6ZS72 473 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 SSBP4Q9BWG4 385 aaPredicted RBP7.3□□□□□ -1.24
VAPB-201ENST00000265619 VCX2Q9H322 139 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 KCNIP2Q9NS61 270 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 C19orf25Q9UFG5 118 aaPredicted RBP7.3□□□□□ -1.24
VAPB-201ENST00000265619 ZNF292O60281 2723 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 NCOR2Q9Y618 2525 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 CD5LO43866 347 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 FOXH1O75593 365 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 CGAP01215 116 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 COX5AP20674 150 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 MSR1P21757 451 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 S100GP29377 79 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 FOLR3P41439 243 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 SPATA31B1PQ5VZV4 182 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 PERPQ96FX8 193 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 TPPP3Q9BW30 176 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 OR2D2Q9H210 308 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 TIMM9Q9Y5J7 89 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 HILPDAQ9Y5L2 63 aa7.3□□□□□ -1.24
VAPB-201ENST00000265619 TEX48A0A1B0GUV7 120 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 H3BUT2 72 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 M0R135 149 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 RHBDL1O75783 438 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 LINC00869P0C866 280 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 ATP1A1-AS1Q5TC04 95 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 RNASEKQ6P5S7 137 aaKnown RBP7.29□□□□□ -1.24
VAPB-201ENST00000265619 LINC00696Q6ZRV3 163 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 C2orf91Q6ZV80 131 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 SPACA3Q8IXA5 215 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 OR10W1Q8NGF6 305 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 SLC25A40Q8TBP6 338 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 ZNF799Q96GE5 643 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 CLCF1Q9UBD9 225 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 ZNF716A6NP11 495 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 ZG16O60844 167 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 SCGB2A1O75556 95 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 REG1AP05451 166 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 SLC25A6P12236 298 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 GATA3P23771 443 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 GUCA1AP43080 201 aaPredicted RBP7.29□□□□□ -1.24
VAPB-201ENST00000265619 CX3CL1P78423 397 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 OR2T6Q8NHC8 308 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 SPSB1Q96BD6 273 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 BORCS8Q96FH0 119 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 EAF1Q96JC9 268 aaPredicted RBP7.29□□□□□ -1.24
VAPB-201ENST00000265619 POLEQ07864 2286 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 ICE1Q9Y2F5 2266 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 IGKV3D-11A0A0A0MRZ8 115 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 FBLL1A6NHQ2 334 aaKnown RBP7.29□□□□□ -1.24
VAPB-201ENST00000265619 LINC00205P59089 165 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 GRB2P62993 217 aaKnown RBP7.29□□□□□ -1.24
VAPB-201ENST00000265619 VWC2Q2TAL6 325 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 HES3Q5TGS1 186 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 ACP7Q6ZNF0 438 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 OR2Z1Q8NG97 314 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 SSBP3Q9BWW4 388 aaPredicted RBP7.29□□□□□ -1.24
VAPB-201ENST00000265619 STRADBQ9C0K7 418 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 COMMD5Q9GZQ3 224 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 TNFRSF19Q9NS68 423 aa7.29□□□□□ -1.24
VAPB-201ENST00000265619 PEF1Q9UBV8 284 aaKnown RBP7.29□□□□□ -1.24
VAPB-201ENST00000265619 DSPP15924 2871 aaKnown RBP7.29□□□□□ -1.24
VAPB-201ENST00000265619 ROS1P08922 2347 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 LOC102723996A0A087X1L8 192 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 IGHV3-15A0A0B4J1V0 119 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 ZFAND5O76080 213 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 MGST1P10620 155 aaKnown RBP7.28□□□□□ -1.24
VAPB-201ENST00000265619 BCL3P20749 454 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 CCDC144NLQ6NUI1 221 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 NHLRC2Q8NBF2 726 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 CPT1CQ8TCG5 803 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 IL1F10Q8WWZ1 152 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 NINJ1Q92982 152 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 RAB37Q96AX2 223 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 PLPPR2Q96GM1 343 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 SCRT2Q9NQ03 307 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 DOCK10Q96BY6 2186 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 HSBP1O75506 76 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 TNFSF15O95150 251 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 ZNF718Q3SXZ3 478 aa7.28□□□□□ -1.24
VAPB-201ENST00000265619 SLC25A34Q6PIV7 304 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms