RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 AKIRIN1Q9H9L7 192 aaPredicted RBP10.9□□□□□ -0.66
NUP54-201ENST00000264883 DEPPQ9NTK1 212 aa10.9□□□□□ -0.66
NUP54-201ENST00000264883 DLL3Q9NYJ7 618 aa10.9□□□□□ -0.66
NUP54-201ENST00000264883 MED12Q93074 2177 aa10.9□□□□□ -0.66
NUP54-201ENST00000264883 TRAV24A0A0B4J272 114 aa10.9□□□□□ -0.66
NUP54-201ENST00000264883 TNFSF15O95150 251 aa10.9□□□□□ -0.66
NUP54-201ENST00000264883 CLDN14O95500 239 aa10.9□□□□□ -0.66
NUP54-201ENST00000264883 GATA2P23769 480 aaPredicted RBP10.9□□□□□ -0.66
NUP54-201ENST00000264883 SLC25A34Q6PIV7 304 aa10.9□□□□□ -0.66
NUP54-201ENST00000264883 Q8IYB0 196 aa10.9□□□□□ -0.66
NUP54-201ENST00000264883 PRSS33Q8NF86 280 aa10.9□□□□□ -0.66
NUP54-201ENST00000264883 C11orf52Q96A22 123 aa10.9□□□□□ -0.66
NUP54-201ENST00000264883 RNASE7Q9H1E1 156 aaKnown RBP10.9□□□□□ -0.66
NUP54-201ENST00000264883 CRIM1Q9NZV1 1036 aa10.9□□□□□ -0.66
NUP54-201ENST00000264883 SH3BGRL2Q9UJC5 107 aa10.9□□□□□ -0.66
NUP54-201ENST00000264883 ARL2-SNX15V9GYD0 113 aa10.9□□□□□ -0.66
NUP54-201ENST00000264883 OR4C46A6NHA9 309 aa10.89□□□□□ -0.67
NUP54-201ENST00000264883 CCL4P13236 92 aa10.89□□□□□ -0.67
NUP54-201ENST00000264883 USF1P22415 310 aaPredicted RBP10.89□□□□□ -0.67
NUP54-201ENST00000264883 GNG4P50150 75 aa10.89□□□□□ -0.67
NUP54-201ENST00000264883 RBPJQ06330 500 aa10.89□□□□□ -0.67
NUP54-201ENST00000264883 SPINK9Q5DT21 86 aa10.89□□□□□ -0.67
NUP54-201ENST00000264883 DRAM1Q8N682 238 aa10.89□□□□□ -0.67
NUP54-201ENST00000264883 OR1B1Q8NGR6 318 aa10.89□□□□□ -0.67
NUP54-201ENST00000264883 C5orf49A4QMS7 147 aa10.89□□□□□ -0.67
NUP54-201ENST00000264883 GAGE10A6NGK3 116 aa10.89□□□□□ -0.67
NUP54-201ENST00000264883 SYNGR1O43759 233 aa10.89□□□□□ -0.67
NUP54-201ENST00000264883 GCHFRP30047 84 aa10.89□□□□□ -0.67
NUP54-201ENST00000264883 FOLR3P41439 243 aa10.89□□□□□ -0.67
NUP54-201ENST00000264883 NHLH1Q02575 133 aa10.89□□□□□ -0.67
NUP54-201ENST00000264883 SLAQ13239 276 aa10.89□□□□□ -0.67
NUP54-201ENST00000264883 CENPWQ5EE01 88 aa10.89□□□□□ -0.67
NUP54-201ENST00000264883 DOLPP1Q86YN1 238 aa10.89□□□□□ -0.67
NUP54-201ENST00000264883 SLC25A40Q8TBP6 338 aa10.89□□□□□ -0.67
NUP54-201ENST00000264883 TMEM70Q9BUB7 260 aa10.89□□□□□ -0.67
NUP54-201ENST00000264883 J3QT63 122 aa10.88□□□□□ -0.67
NUP54-201ENST00000264883 OPRK1P41145 380 aa10.88□□□□□ -0.67
NUP54-201ENST00000264883 LGALS7P47929 136 aa10.88□□□□□ -0.67
NUP54-201ENST00000264883 SAMD13Q5VXD3 122 aa10.88□□□□□ -0.67
NUP54-201ENST00000264883 RNASEKQ6P5S7 137 aaKnown RBP10.88□□□□□ -0.67
NUP54-201ENST00000264883 PET117Q6UWS5 81 aa10.88□□□□□ -0.67
NUP54-201ENST00000264883 KIR3DL3Q8N743 410 aa10.88□□□□□ -0.67
NUP54-201ENST00000264883 TMEM186Q96B77 213 aa10.88□□□□□ -0.67
NUP54-201ENST00000264883 ZC2HC1AQ96GY0 325 aa10.88□□□□□ -0.67
NUP54-201ENST00000264883 GP6Q9HCN6 339 aa10.88□□□□□ -0.67
NUP54-201ENST00000264883 ZNF331Q9NQX6 463 aaPredicted RBP10.88□□□□□ -0.67
NUP54-201ENST00000264883 OSTCQ9NRP0 149 aa10.88□□□□□ -0.67
NUP54-201ENST00000264883 CFAP54Q96N23 3096 aa10.88□□□□□ -0.67
NUP54-201ENST00000264883 RAB29O14966 203 aa10.88□□□□□ -0.67
NUP54-201ENST00000264883 RBMXL2O75526 392 aaKnown RBP10.88□□□□□ -0.67
NUP54-201ENST00000264883 PLP2Q04941 152 aa10.88□□□□□ -0.67
NUP54-201ENST00000264883 ZNF816Q0VGE8 651 aaPredicted RBP10.88□□□□□ -0.67
NUP54-201ENST00000264883 PDLIM3Q53GG5 364 aaPredicted RBP10.88□□□□□ -0.67
NUP54-201ENST00000264883 COMMD5Q9GZQ3 224 aa10.88□□□□□ -0.67
NUP54-201ENST00000264883 OTOGLQ3ZCN5 2332 aa10.88□□□□□ -0.67
NUP54-201ENST00000264883 hDV102S1A0JD36 115 aa10.87□□□□□ -0.67
NUP54-201ENST00000264883 HELTA6NFD8 242 aa10.87□□□□□ -0.67
NUP54-201ENST00000264883 P0C879 139 aa10.87□□□□□ -0.67
NUP54-201ENST00000264883 CCNOP22674 350 aa10.87□□□□□ -0.67
NUP54-201ENST00000264883 WIPI1Q5MNZ9 446 aaPredicted RBP10.87□□□□□ -0.67
NUP54-201ENST00000264883 ZNF497Q6ZNH5 498 aa10.87□□□□□ -0.67
NUP54-201ENST00000264883 PQLC2Q6ZP29 291 aa10.87□□□□□ -0.67
NUP54-201ENST00000264883 UBALD1Q8TB05 177 aa10.87□□□□□ -0.67
NUP54-201ENST00000264883 TNFRSF19Q9NS68 423 aa10.87□□□□□ -0.67
NUP54-201ENST00000264883 CLEC5AQ9NY25 188 aa10.87□□□□□ -0.67
NUP54-201ENST00000264883 TECRQ9NZ01 308 aaKnown RBP10.87□□□□□ -0.67
NUP54-201ENST00000264883 WDFY3Q8IZQ1 3526 aa10.87□□□□□ -0.67
NUP54-201ENST00000264883 SMIM27A0A1W2PRY6 76 aa10.87□□□□□ -0.67
NUP54-201ENST00000264883 C9orf172C9J069 976 aa10.87□□□□□ -0.67
NUP54-201ENST00000264883 MPDU1O75352 247 aa10.87□□□□□ -0.67
NUP54-201ENST00000264883 MT-CO2P00403 227 aa10.87□□□□□ -0.67
NUP54-201ENST00000264883 NBL1P41271 181 aa10.87□□□□□ -0.67
NUP54-201ENST00000264883 MIC13Q5XKP0 118 aa10.87□□□□□ -0.67
NUP54-201ENST00000264883 Q6P435 159 aa10.87□□□□□ -0.67
NUP54-201ENST00000264883 S100A7AQ86SG5 101 aa10.87□□□□□ -0.67
NUP54-201ENST00000264883 SPACA3Q8IXA5 215 aa10.87□□□□□ -0.67
NUP54-201ENST00000264883 POM121L2Q96KW2 1035 aa10.87□□□□□ -0.67
NUP54-201ENST00000264883 CHRDL1Q9BU40 450 aa10.87□□□□□ -0.67
NUP54-201ENST00000264883 MBNL3Q9NUK0 354 aaKnown RBP10.87□□□□□ -0.67
NUP54-201ENST00000264883 CLCF1Q9UBD9 225 aa10.87□□□□□ -0.67
NUP54-201ENST00000264883 IZUMO1RA6ND01 250 aa10.86□□□□□ -0.67
NUP54-201ENST00000264883 C15orf62A8K5M9 175 aa10.86□□□□□ -0.67
NUP54-201ENST00000264883 GOSR1O95249 250 aa10.86□□□□□ -0.67
NUP54-201ENST00000264883 CRYBB3P26998 211 aa10.86□□□□□ -0.67
NUP54-201ENST00000264883 GDF1P27539 372 aa10.86□□□□□ -0.67
NUP54-201ENST00000264883 CATR1Q13166 79 aa10.86□□□□□ -0.67
NUP54-201ENST00000264883 SPATA46Q5T0L3 261 aa10.86□□□□□ -0.67
NUP54-201ENST00000264883 GTF2H5Q6ZYL4 71 aa10.86□□□□□ -0.67
NUP54-201ENST00000264883 C5orf17Q8NAS9 161 aa10.86□□□□□ -0.67
NUP54-201ENST00000264883 OR1N2Q8NGR9 330 aa10.86□□□□□ -0.67
NUP54-201ENST00000264883 SERTAD4Q9NUC0 356 aa10.86□□□□□ -0.67
NUP54-201ENST00000264883 TRAPPC2LQ9UL33 140 aa10.86□□□□□ -0.67
NUP54-201ENST00000264883 BOKQ9UMX3 212 aaPredicted RBP10.86□□□□□ -0.67
NUP54-201ENST00000264883 POLDIP2Q9Y2S7 368 aa10.86□□□□□ -0.67
NUP54-201ENST00000264883 A0A0G2JMM0 328 aa10.85□□□□□ -0.67
NUP54-201ENST00000264883 A0A1W2PPB8 328 aa10.85□□□□□ -0.67
NUP54-201ENST00000264883 C7orf71A4D174 169 aa10.85□□□□□ -0.67
NUP54-201ENST00000264883 KIR3DP1A8MWS1 328 aa10.85□□□□□ -0.67
NUP54-201ENST00000264883 CDIPTO14735 213 aa10.85□□□□□ -0.67
NUP54-201ENST00000264883 TIGITQ495A1 244 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms