RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 SAMD13Q5VXD3 122 aa12.7□□□□□ -0.38
CASC3-201ENST00000264645 COX11Q9Y6N1 276 aa12.7□□□□□ -0.38
CASC3-201ENST00000264645 ALPK3Q96L96 1907 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 C7orf71A4D174 169 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 HIGD1CA8MV81 97 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 CLEC3BP05452 202 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 GAGE1Q13065 139 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 TBR1Q16650 682 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 OR10AG1Q8NH19 301 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 ANAPC10Q9UM13 185 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 WDR83OSQ9Y284 106 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 IGHV5-10-1A0A0J9YXX1 117 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 A1L4Q6 167 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 WNT9BO14905 357 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 GPR183P32249 361 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 ZNF83P51522 516 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 ZNF726P1Q15940 193 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 Q1RN00 199 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 SCGB1D4Q6XE38 83 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 Q6ZVH6 145 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 OR1L8Q8NGR8 309 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 PLPPR1Q8TBJ4 325 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 OR5P3Q8WZ94 311 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 FBXL7Q9UJT9 491 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 LOXL2Q9Y4K0 774 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 M0QZ24 198 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 MRPL52Q86TS9 123 aaKnown RBP12.69□□□□□ -0.38
CASC3-201ENST00000264645 REPIN1Q9BWE0 567 aaKnown RBP12.69□□□□□ -0.38
CASC3-201ENST00000264645 AKIRIN1Q9H9L7 192 aaPredicted RBP12.69□□□□□ -0.38
CASC3-201ENST00000264645 RBFOX2O43251 390 aaKnown RBP eCLIP12.69□□□□□ -0.381e-5■■■■□ 20.3
CASC3-201ENST00000264645 HYPMO75409 117 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 MOB3BQ86TA1 216 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 THYN1Q9P016 225 aa12.69□□□□□ -0.38
CASC3-201ENST00000264645 MOGAT3Q86VF5 341 aa12.68□□□□□ -0.38
CASC3-201ENST00000264645 PNKDQ8N490 385 aa12.68□□□□□ -0.38
CASC3-201ENST00000264645 STPG4Q8N801 248 aa12.68□□□□□ -0.38
CASC3-201ENST00000264645 ZNF703Q9H7S9 590 aaPredicted RBP12.68□□□□□ -0.38
CASC3-201ENST00000264645 CREBBPQ92793 2442 aa12.68□□□□□ -0.38
CASC3-201ENST00000264645 IZUMO1RA6ND01 250 aa12.68□□□□□ -0.38
CASC3-201ENST00000264645 KLF7O75840 302 aaPredicted RBP12.68□□□□□ -0.38
CASC3-201ENST00000264645 UCP2P55851 309 aa12.68□□□□□ -0.38
CASC3-201ENST00000264645 RPL39P5Q59GN2 51 aa12.68□□□□□ -0.38
CASC3-201ENST00000264645 OR10J3Q5JRS4 329 aa12.68□□□□□ -0.38
CASC3-201ENST00000264645 PCSK4Q6UW60 755 aa12.68□□□□□ -0.38
CASC3-201ENST00000264645 TRAV24A0A0B4J272 114 aa12.68□□□□□ -0.38
CASC3-201ENST00000264645 M0R296 226 aa12.68□□□□□ -0.38
CASC3-201ENST00000264645 CLPSP04118 112 aa12.68□□□□□ -0.38
CASC3-201ENST00000264645 FAM222BQ8WU58 562 aa12.68□□□□□ -0.38
CASC3-201ENST00000264645 SRSF12Q8WXF0 261 aaKnown RBP12.68□□□□□ -0.38
CASC3-201ENST00000264645 CHCHD2Q9Y6H1 151 aaPredicted RBP12.68□□□□□ -0.38
CASC3-201ENST00000264645 NBASA2RRP1 2371 aa12.67□□□□□ -0.38
CASC3-201ENST00000264645 MPV17P39210 176 aa12.67□□□□□ -0.38
CASC3-201ENST00000264645 PAX9P55771 341 aa12.67□□□□□ -0.38
CASC3-201ENST00000264645 TNXAQ16473 311 aa12.67□□□□□ -0.38
CASC3-201ENST00000264645 MEOX1P50221 254 aa12.67□□□□□ -0.38
CASC3-201ENST00000264645 SMAGPQ0VAQ4 97 aa12.67□□□□□ -0.38
CASC3-201ENST00000264645 C1orf53Q5VUE5 145 aa12.67□□□□□ -0.38
CASC3-201ENST00000264645 FBXW9Q5XUX1 488 aa12.67□□□□□ -0.38
CASC3-201ENST00000264645 FGFBP3Q8TAT2 258 aa12.67□□□□□ -0.38
CASC3-201ENST00000264645 DCTN5Q9BTE1 182 aa12.67□□□□□ -0.38
CASC3-201ENST00000264645 PROCRQ9UNN8 238 aa12.67□□□□□ -0.38
CASC3-201ENST00000264645 USF3Q68DE3 2245 aa12.67□□□□□ -0.38
CASC3-201ENST00000264645 H3BVH4 76 aa12.67□□□□□ -0.38
CASC3-201ENST00000264645 SRSF9Q13242 221 aaKnown RBP eCLIP12.67□□□□□ -0.38
CASC3-201ENST00000264645 TMEM14EPQ6UXP3 125 aa12.67□□□□□ -0.38
CASC3-201ENST00000264645 TRAV30A0A087WSZ9 112 aa12.66□□□□□ -0.38
CASC3-201ENST00000264645 hDV102S1A0JD36 115 aa12.66□□□□□ -0.38
CASC3-201ENST00000264645 TCF24Q7RTU0 167 aa12.66□□□□□ -0.38
CASC3-201ENST00000264645 VSTM2AQ8TAG5 236 aa12.66□□□□□ -0.38
CASC3-201ENST00000264645 OSTCQ9NRP0 149 aa12.66□□□□□ -0.38
CASC3-201ENST00000264645 EP300Q09472 2414 aaPredicted RBP12.66□□□□□ -0.38
CASC3-201ENST00000264645 LOC107984156A0A0G2JMH3 177 aa12.66□□□□□ -0.38
CASC3-201ENST00000264645 GAGE12BA1L429 117 aa12.66□□□□□ -0.38
CASC3-201ENST00000264645 C5orf67F2Z3F1 127 aa12.66□□□□□ -0.38
CASC3-201ENST00000264645 ITGB1BP1O14713 200 aa12.66□□□□□ -0.38
CASC3-201ENST00000264645 TMPRSS2O15393 492 aa12.66□□□□□ -0.38
CASC3-201ENST00000264645 ORM1P02763 201 aa12.66□□□□□ -0.38
CASC3-201ENST00000264645 IGLC2P0DOY2 106 aa12.66□□□□□ -0.38
CASC3-201ENST00000264645 IGLC3P0DOY3 106 aa12.66□□□□□ -0.38
CASC3-201ENST00000264645 EFNB3Q15768 340 aa12.66□□□□□ -0.38
CASC3-201ENST00000264645 TDRG1Q3Y452 100 aa12.66□□□□□ -0.38
CASC3-201ENST00000264645 ARL17AQ8IVW1 177 aa12.66□□□□□ -0.38
CASC3-201ENST00000264645 C1QTNF5Q9BXJ0 243 aa12.66□□□□□ -0.38
CASC3-201ENST00000264645 GFRA1P56159 465 aa12.65□□□□□ -0.38
CASC3-201ENST00000264645 PRSS8Q16651 343 aa12.65□□□□□ -0.38
CASC3-201ENST00000264645 HCP5Q6MZN7 132 aa12.65□□□□□ -0.38
CASC3-201ENST00000264645 UFC1Q9Y3C8 167 aa12.65□□□□□ -0.38
CASC3-201ENST00000264645 CADP27708 2225 aa12.65□□□□□ -0.38
CASC3-201ENST00000264645 IGHV1-69-2A0A0G2JMI3 117 aa12.65□□□□□ -0.38
CASC3-201ENST00000264645 IGKV1D-33P01593 117 aa12.65□□□□□ -0.38
CASC3-201ENST00000264645 IGKV1-33P01594 117 aa12.65□□□□□ -0.38
CASC3-201ENST00000264645 RFPL3SP0C7P2 107 aa12.65□□□□□ -0.38
CASC3-201ENST00000264645 STAG3L2P0CL84 134 aa12.65□□□□□ -0.38
CASC3-201ENST00000264645 STAG3L3P0CL85 134 aa12.65□□□□□ -0.38
CASC3-201ENST00000264645 CRYGSP22914 178 aa12.65□□□□□ -0.38
CASC3-201ENST00000264645 SLC25A45Q8N413 288 aa12.65□□□□□ -0.38
CASC3-201ENST00000264645 OR2M7Q8NG81 312 aa12.65□□□□□ -0.38
CASC3-201ENST00000264645 OR2K2Q8NGT1 345 aa12.65□□□□□ -0.38
CASC3-201ENST00000264645 NPIPB3Q92617 1050 aa12.65□□□□□ -0.38
CASC3-201ENST00000264645 GRAMD2BQ96HH9 432 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms