RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 PROB1E7EW31 1015 aa10.94□□□□□ -0.66
TTC39A-202ENST00000262676 H7C1H1 209 aa10.94□□□□□ -0.66
TTC39A-202ENST00000262676 HLA-DQB1P01920 261 aa10.94□□□□□ -0.66
TTC39A-202ENST00000262676 ACSF3Q4G176 576 aaPredicted RBP10.94□□□□□ -0.66
TTC39A-202ENST00000262676 A0A0J9YW62 118 aa10.94□□□□□ -0.66
TTC39A-202ENST00000262676 HOXA3O43365 443 aaPredicted RBP10.94□□□□□ -0.66
TTC39A-202ENST00000262676 CGAP01215 116 aa10.93□□□□□ -0.66
TTC39A-202ENST00000262676 NINQ8N4C6 2090 aa10.93□□□□□ -0.66
TTC39A-202ENST00000262676 CSRP1P21291 193 aaKnown RBP10.93□□□□□ -0.66
TTC39A-202ENST00000262676 TBR1Q16650 682 aa10.93□□□□□ -0.66
TTC39A-202ENST00000262676 PTP4A3O75365 173 aa10.93□□□□□ -0.66
TTC39A-202ENST00000262676 NPC2P61916 151 aa10.93□□□□□ -0.66
TTC39A-202ENST00000262676 P2RY6Q15077 328 aa10.93□□□□□ -0.66
TTC39A-202ENST00000262676 C2orf68Q2NKX9 166 aa10.93□□□□□ -0.66
TTC39A-202ENST00000262676 ZNF818PQ6ZRF7 136 aa10.93□□□□□ -0.66
TTC39A-202ENST00000262676 CYP2G1PQ6ZSU1 146 aa10.93□□□□□ -0.66
TTC39A-202ENST00000262676 EDA2RQ9HAV5 297 aa10.93□□□□□ -0.66
TTC39A-202ENST00000262676 RIF1Q5UIP0 2472 aaKnown RBP10.93□□□□□ -0.66
TTC39A-202ENST00000262676 PQLC2LA1A4F0 135 aa10.93□□□□□ -0.66
TTC39A-202ENST00000262676 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.93□□□□□ -0.66
TTC39A-202ENST00000262676 COX6A1P12074 109 aa10.93□□□□□ -0.66
TTC39A-202ENST00000262676 IGHV3-64A0A075B6Q5 118 aa10.93□□□□□ -0.66
TTC39A-202ENST00000262676 FOXH1O75593 365 aa10.93□□□□□ -0.66
TTC39A-202ENST00000262676 IL6RP08887 468 aaPredicted RBP10.93□□□□□ -0.66
TTC39A-202ENST00000262676 FAM71F2Q6NXP2 309 aa10.93□□□□□ -0.66
TTC39A-202ENST00000262676 VGLL1Q99990 258 aa10.93□□□□□ -0.66
TTC39A-202ENST00000262676 SLC25A2Q9BXI2 301 aa10.93□□□□□ -0.66
TTC39A-202ENST00000262676 RTTNQ86VV8 2226 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 A0A0U1RRA0 63 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 GNLYP22749 145 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 SNAI3Q3KNW1 292 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 SEMA5BQ9P283 1151 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 LOC105371242A0A075B767 164 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 PPIAL4CA0A0B4J2A2 164 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 CENPVL1A0A0U1RR11 272 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 A6NNC1 897 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 PPIAL4GP0DN37 164 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 TDGF1P3P51864 188 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 FAM27E3Q08E93 113 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 ASCL4Q6XD76 172 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 TEX45Q8NA69 505 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 CLDND2Q8NHS1 167 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 SIGLEC12Q96PQ1 595 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 PPP1R3EQ9H7J1 279 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 LAMTOR2Q9Y2Q5 125 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 H2BFSP57053 126 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 LDLRAD2Q5SZI1 272 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 C1orf122Q6ZSJ8 110 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 PPP1R32Q7Z5V6 425 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 ZNF257Q9Y2Q1 563 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 COX11Q9Y6N1 276 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 SBF2Q86WG5 1849 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 MPTX1A8MV57 137 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 VKORC1Q9BQB6 163 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 NPIPB11E5RHQ5 1161 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 ZNF585BQ52M93 769 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 OR11H4Q8NGC9 324 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 C5orf66Q9H5L9 145 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 DLL3Q9NYJ7 618 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 TCF19Q9Y242 345 aa10.92□□□□□ -0.66
TTC39A-202ENST00000262676 IFNL4K9M1U5 179 aa10.91□□□□□ -0.66
TTC39A-202ENST00000262676 Q5BKY6 102 aa10.91□□□□□ -0.66
TTC39A-202ENST00000262676 AQP3Q92482 292 aa10.91□□□□□ -0.66
TTC39A-202ENST00000262676 LINC01587Q99440 93 aa10.91□□□□□ -0.66
TTC39A-202ENST00000262676 PRTN3P24158 256 aa10.91□□□□□ -0.66
TTC39A-202ENST00000262676 CDKN1AP38936 164 aa10.91□□□□□ -0.66
TTC39A-202ENST00000262676 OR10J3Q5JRS4 329 aa10.91□□□□□ -0.66
TTC39A-202ENST00000262676 MRPL20Q9BYC9 149 aaKnown RBP10.91□□□□□ -0.66
TTC39A-202ENST00000262676 COL6A6A6NMZ7 2263 aa10.91□□□□□ -0.66
TTC39A-202ENST00000262676 LINC00587B1AMM8 73 aa10.91□□□□□ -0.66
TTC39A-202ENST00000262676 TFF3Q07654 80 aa10.91□□□□□ -0.66
TTC39A-202ENST00000262676 TMEM187Q14656 261 aa10.91□□□□□ -0.66
TTC39A-202ENST00000262676 NHLRC3Q5JS37 347 aa10.91□□□□□ -0.66
TTC39A-202ENST00000262676 SMIM8Q96KF7 97 aa10.91□□□□□ -0.66
TTC39A-202ENST00000262676 ZNF146Q15072 292 aa10.9□□□□□ -0.66
TTC39A-202ENST00000262676 CDK2AP2O75956 126 aa10.9□□□□□ -0.66
TTC39A-202ENST00000262676 IGKV1D-16P01601 117 aa10.9□□□□□ -0.66
TTC39A-202ENST00000262676 IFITM2Q01629 132 aa10.9□□□□□ -0.66
TTC39A-202ENST00000262676 GAGE2EQ4V326 116 aa10.9□□□□□ -0.66
TTC39A-202ENST00000262676 ZFAND6Q6FIF0 208 aa10.9□□□□□ -0.66
TTC39A-202ENST00000262676 RPP21Q9H633 154 aaKnown RBP10.9□□□□□ -0.66
TTC39A-202ENST00000262676 GAGE2DQ9UEU5 116 aa10.9□□□□□ -0.66
TTC39A-202ENST00000262676 IGHV3OR16-8A0A075B7F1 116 aa10.9□□□□□ -0.66
TTC39A-202ENST00000262676 ODAMA1E959 279 aa10.9□□□□□ -0.66
TTC39A-202ENST00000262676 TRGV3P03979 118 aa10.9□□□□□ -0.66
TTC39A-202ENST00000262676 PCOLCEQ15113 449 aa10.9□□□□□ -0.66
TTC39A-202ENST00000262676 HBDP02042 147 aa10.9□□□□□ -0.67
TTC39A-202ENST00000262676 PNKDQ8N490 385 aa10.9□□□□□ -0.67
TTC39A-202ENST00000262676 CITED1Q99966 193 aa10.9□□□□□ -0.67
TTC39A-202ENST00000262676 FAM90A26D6RGX4 464 aa10.89□□□□□ -0.67
TTC39A-202ENST00000262676 CELA3AP09093 270 aa10.89□□□□□ -0.67
TTC39A-202ENST00000262676 ADMP35318 185 aa10.89□□□□□ -0.67
TTC39A-202ENST00000262676 TMEM42Q69YG0 159 aa10.89□□□□□ -0.67
TTC39A-202ENST00000262676 A0A1B0GUT8 65 aa10.89□□□□□ -0.67
TTC39A-202ENST00000262676 GGTLC3B5MD39 225 aa10.89□□□□□ -0.67
TTC39A-202ENST00000262676 FSTP19883 344 aa10.89□□□□□ -0.67
TTC39A-202ENST00000262676 C19orf24Q9BVV8 132 aa10.89□□□□□ -0.67
TTC39A-202ENST00000262676 FOXA2Q9Y261 457 aaPredicted RBP10.89□□□□□ -0.67
TTC39A-202ENST00000262676 TRGV2A0A075B6R0 118 aa10.89□□□□□ -0.67
TTC39A-202ENST00000262676 ATP5G3P48201 142 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms