RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 SNRPGP15A8MWD9 76 aa13.02□□□□□ -0.33
CHCHD3-201ENST00000262570 ST8SIA3O43173 380 aa13.02□□□□□ -0.33
CHCHD3-201ENST00000262570 SOX15O60248 233 aa13.02□□□□□ -0.33
CHCHD3-201ENST00000262570 IGLV1-40P01703 118 aa13.02□□□□□ -0.33
CHCHD3-201ENST00000262570 IGHG4P01861 327 aa13.02□□□□□ -0.33
CHCHD3-201ENST00000262570 TRAPPC2P0DI81 140 aa13.02□□□□□ -0.33
CHCHD3-201ENST00000262570 TRAPPC2BP0DI82 140 aa13.02□□□□□ -0.33
CHCHD3-201ENST00000262570 SULT1A3P0DMM9 295 aa13.02□□□□□ -0.33
CHCHD3-201ENST00000262570 SULT1A4P0DMN0 295 aa13.02□□□□□ -0.33
CHCHD3-201ENST00000262570 CHRNA7P36544 502 aa13.02□□□□□ -0.33
CHCHD3-201ENST00000262570 OXA1LQ15070 435 aa13.02□□□□□ -0.33
CHCHD3-201ENST00000262570 THOC7Q6I9Y2 204 aaKnown RBP13.02□□□□□ -0.33
CHCHD3-201ENST00000262570 TEX38Q6PEX7 206 aa13.02□□□□□ -0.33
CHCHD3-201ENST00000262570 C12orf45Q8N5I9 185 aaPredicted RBP13.02□□□□□ -0.33
CHCHD3-201ENST00000262570 SLC25A6P12236 298 aa13.01□□□□□ -0.33
CHCHD3-201ENST00000262570 SRSF4Q08170 494 aaKnown RBP13.01□□□□□ -0.33
CHCHD3-201ENST00000262570 SMCO1Q147U7 214 aa13.01□□□□□ -0.33
CHCHD3-201ENST00000262570 TTC9CQ8N5M4 171 aa13.01□□□□□ -0.33
CHCHD3-201ENST00000262570 COMMD1Q8N668 190 aa13.01□□□□□ -0.33
CHCHD3-201ENST00000262570 OR10W1Q8NGF6 305 aa13.01□□□□□ -0.33
CHCHD3-201ENST00000262570 SRSF8Q9BRL6 282 aaKnown RBP13.01□□□□□ -0.33
CHCHD3-201ENST00000262570 ZNF747Q9BV97 191 aa13.01□□□□□ -0.33
CHCHD3-201ENST00000262570 IGLC7A0M8Q6 106 aa13□□□□□ -0.33
CHCHD3-201ENST00000262570 PITX3O75364 302 aa13□□□□□ -0.33
CHCHD3-201ENST00000262570 AREGP15514 252 aa13□□□□□ -0.33
CHCHD3-201ENST00000262570 PSMB8P28062 276 aa13□□□□□ -0.33
CHCHD3-201ENST00000262570 PRCDQ00LT1 54 aa13□□□□□ -0.33
CHCHD3-201ENST00000262570 TATDN3Q17R31 274 aa13□□□□□ -0.33
CHCHD3-201ENST00000262570 TCTEX1D4Q5JR98 221 aa13□□□□□ -0.33
CHCHD3-201ENST00000262570 C3orf56Q8N813 242 aa13□□□□□ -0.33
CHCHD3-201ENST00000262570 OR5T1Q8NG75 326 aa13□□□□□ -0.33
CHCHD3-201ENST00000262570 OR5M8Q8NGP6 311 aa13□□□□□ -0.33
CHCHD3-201ENST00000262570 OR52E5Q8NH55 327 aa13□□□□□ -0.33
CHCHD3-201ENST00000262570 HINT2Q9BX68 163 aa13□□□□□ -0.33
CHCHD3-201ENST00000262570 MPTX1A8MV57 137 aa12.99□□□□□ -0.33
CHCHD3-201ENST00000262570 IFNA21P01568 189 aa12.99□□□□□ -0.33
CHCHD3-201ENST00000262570 IFNA17P01571 189 aa12.99□□□□□ -0.33
CHCHD3-201ENST00000262570 ELANEP08246 267 aa12.99□□□□□ -0.33
CHCHD3-201ENST00000262570 CD28P10747 220 aa12.99□□□□□ -0.33
CHCHD3-201ENST00000262570 CD83Q01151 205 aa12.99□□□□□ -0.33
CHCHD3-201ENST00000262570 WT1-ASQ06250 92 aa12.99□□□□□ -0.33
CHCHD3-201ENST00000262570 FOXE3Q13461 319 aa12.99□□□□□ -0.33
CHCHD3-201ENST00000262570 PDLIM3Q53GG5 364 aaPredicted RBP12.99□□□□□ -0.33
CHCHD3-201ENST00000262570 HSD17B13Q7Z5P4 300 aaPredicted RBP12.99□□□□□ -0.33
CHCHD3-201ENST00000262570 RNF152Q8N8N0 203 aa12.99□□□□□ -0.33
CHCHD3-201ENST00000262570 UXS1Q8NBZ7 420 aa12.99□□□□□ -0.33
CHCHD3-201ENST00000262570 OR4X2Q8NGF9 303 aa12.99□□□□□ -0.33
CHCHD3-201ENST00000262570 FAM110DQ8TAY7 271 aaPredicted RBP12.99□□□□□ -0.33
CHCHD3-201ENST00000262570 CITED1Q99966 193 aa12.99□□□□□ -0.33
CHCHD3-201ENST00000262570 PDCD10Q9BUL8 212 aa12.99□□□□□ -0.33
CHCHD3-201ENST00000262570 CACFD1Q9UGQ2 172 aa12.99□□□□□ -0.33
CHCHD3-201ENST00000262570 TET2Q6N021 2002 aaPredicted RBP12.99□□□□□ -0.33
CHCHD3-201ENST00000262570 C7orf66A4D0T2 115 aa12.98□□□□□ -0.33
CHCHD3-201ENST00000262570 NPIPB5A8MRT5 1133 aa12.98□□□□□ -0.33
CHCHD3-201ENST00000262570 FBXO24O75426 580 aa12.98□□□□□ -0.33
CHCHD3-201ENST00000262570 CRYGCP07315 174 aa12.98□□□□□ -0.33
CHCHD3-201ENST00000262570 CTRB1P17538 263 aa12.98□□□□□ -0.33
CHCHD3-201ENST00000262570 PSMB6P28072 239 aa12.98□□□□□ -0.33
CHCHD3-201ENST00000262570 SPCS3P61009 180 aa12.98□□□□□ -0.33
CHCHD3-201ENST00000262570 CTRB2Q6GPI1 263 aa12.98□□□□□ -0.33
CHCHD3-201ENST00000262570 C11orf44Q8N8P7 122 aa12.98□□□□□ -0.33
CHCHD3-201ENST00000262570 DNHD1Q96M86 4753 aa12.98□□□□□ -0.33
CHCHD3-201ENST00000262570 BRI3O95415 125 aa12.98□□□□□ -0.33
CHCHD3-201ENST00000262570 OR13C7P0DN81 318 aa12.98□□□□□ -0.33
CHCHD3-201ENST00000262570 OR1S1Q8NH92 325 aa12.98□□□□□ -0.33
CHCHD3-201ENST00000262570 KLK15Q9H2R5 256 aa12.98□□□□□ -0.33
CHCHD3-201ENST00000262570 HSPB7Q9UBY9 170 aa12.98□□□□□ -0.33
CHCHD3-201ENST00000262570 ANK2Q01484 3957 aa12.97□□□□□ -0.33
CHCHD3-201ENST00000262570 INS-IGF2F8WCM5 200 aa12.97□□□□□ -0.33
CHCHD3-201ENST00000262570 H3BUA1 57 aa12.97□□□□□ -0.33
CHCHD3-201ENST00000262570 REG1AP05451 166 aa12.97□□□□□ -0.33
CHCHD3-201ENST00000262570 RAB9AP51151 201 aa12.97□□□□□ -0.33
CHCHD3-201ENST00000262570 TNFRSF9Q07011 255 aa12.97□□□□□ -0.33
CHCHD3-201ENST00000262570 SPINK9Q5DT21 86 aa12.97□□□□□ -0.33
CHCHD3-201ENST00000262570 LCNL1Q6ZST4 164 aa12.97□□□□□ -0.33
CHCHD3-201ENST00000262570 OR10C1Q96KK4 312 aa12.97□□□□□ -0.33
CHCHD3-201ENST00000262570 CITED2Q99967 270 aaPredicted RBP12.97□□□□□ -0.33
CHCHD3-201ENST00000262570 PLEKHA3Q9HB20 300 aa12.97□□□□□ -0.33
CHCHD3-201ENST00000262570 CCSO14618 274 aa12.96□□□□□ -0.33
CHCHD3-201ENST00000262570 RPLP1P05386 114 aaKnown RBP12.96□□□□□ -0.33
CHCHD3-201ENST00000262570 PF4V1P10720 104 aa12.96□□□□□ -0.33
CHCHD3-201ENST00000262570 CXorf66Q5JRM2 361 aaPredicted RBP12.96□□□□□ -0.33
CHCHD3-201ENST00000262570 HIST2H2BDQ6DRA6 164 aa12.96□□□□□ -0.33
CHCHD3-201ENST00000262570 TMEM65Q6PI78 240 aa12.96□□□□□ -0.33
CHCHD3-201ENST00000262570 C19orf35Q6ZS72 473 aa12.96□□□□□ -0.33
CHCHD3-201ENST00000262570 MYOZ3Q8TDC0 251 aa12.96□□□□□ -0.33
CHCHD3-201ENST00000262570 SLA2Q9H6Q3 261 aa12.96□□□□□ -0.33
CHCHD3-201ENST00000262570 ZNF355PQ9NSJ1 428 aa12.96□□□□□ -0.33
CHCHD3-201ENST00000262570 ALG5Q9Y673 324 aa12.96□□□□□ -0.33
CHCHD3-201ENST00000262570 FAM90A26D6RGX4 464 aa12.95□□□□□ -0.34
CHCHD3-201ENST00000262570 NXPH3O95157 252 aa12.95□□□□□ -0.34
CHCHD3-201ENST00000262570 KIAA0141Q14154 515 aaPredicted RBP12.95□□□□□ -0.34
CHCHD3-201ENST00000262570 C2orf68Q2NKX9 166 aa12.95□□□□□ -0.34
CHCHD3-201ENST00000262570 IAH1Q2TAA2 248 aaPredicted RBP12.95□□□□□ -0.34
CHCHD3-201ENST00000262570 KLK9Q2XQG4 91 aa12.95□□□□□ -0.34
CHCHD3-201ENST00000262570 SHISA2Q6UWI4 295 aa12.95□□□□□ -0.34
CHCHD3-201ENST00000262570 MRPL41Q8IXM3 137 aaKnown RBP12.95□□□□□ -0.34
CHCHD3-201ENST00000262570 OR2C3Q8N628 320 aa12.95□□□□□ -0.34
CHCHD3-201ENST00000262570 MS4A10Q96PG2 267 aa12.95□□□□□ -0.34
CHCHD3-201ENST00000262570 KLK9Q9UKQ9 250 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms