RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 C2orf68Q2NKX9 166 aa12.12□□□□□ -0.47
CUX2-201ENST00000261726 LOC101059948A0A1B0GTJ6 334 aa12.11□□□□□ -0.47
CUX2-201ENST00000261726 APOBEC3AP31941 199 aaPredicted RBP12.11□□□□□ -0.47
CUX2-201ENST00000261726 PCP4P48539 62 aa12.11□□□□□ -0.47
CUX2-201ENST00000261726 TFF3Q07654 80 aa12.11□□□□□ -0.47
CUX2-201ENST00000261726 SAXO1Q8IYX7 474 aa12.11□□□□□ -0.47
CUX2-201ENST00000261726 NBEAP1P0C6P0 100 aa12.11□□□□□ -0.47
CUX2-201ENST00000261726 DANCRP0C864 163 aa12.11□□□□□ -0.47
CUX2-201ENST00000261726 MESP2Q0VG99 397 aa12.11□□□□□ -0.47
CUX2-201ENST00000261726 ZNF600Q6ZNG1 722 aa12.11□□□□□ -0.47
CUX2-201ENST00000261726 SLC25A38Q96DW6 304 aa12.11□□□□□ -0.47
CUX2-201ENST00000261726 YAE1D1Q9NRH1 226 aa12.11□□□□□ -0.47
CUX2-201ENST00000261726 MIA3Q5JRA6 1907 aa12.11□□□□□ -0.47
CUX2-201ENST00000261726 SCO2A0A1W2PP80 73 aa12.11□□□□□ -0.47
CUX2-201ENST00000261726 NXT2Q9NPJ8 142 aaKnown RBP12.11□□□□□ -0.47
CUX2-201ENST00000261726 IFITM3Q01628 133 aa12.11□□□□□ -0.47
CUX2-201ENST00000261726 KLF4O43474 513 aa12.11□□□□□ -0.47
CUX2-201ENST00000261726 TMEM42Q69YG0 159 aa12.11□□□□□ -0.47
CUX2-201ENST00000261726 FUT5Q11128 374 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 STHQ8IWL8 128 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 HIST1H2BAQ96A08 127 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 WFDC6Q9BQY6 131 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 H2BFSP57053 126 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 OR5P3Q8WZ94 311 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 NEUROG1Q92886 237 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 NPCDR1Q9BY65 106 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 PILRAQ9UKJ1 303 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 DOCK3Q8IZD9 2030 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 LOC390937A0A1W2PQ73 354 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 CTSBP07858 339 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 TBR1Q16650 682 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 ARPC1AQ92747 370 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 G6PC2Q9NQR9 355 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 LINC00614P0C842 121 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 FAM27E3Q08E93 113 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 C1orf53Q5VUE5 145 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 TCF23Q7RTU1 214 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 PHLDA1Q8WV24 401 aaPredicted RBP12.1□□□□□ -0.47
CUX2-201ENST00000261726 SDHCQ99643 169 aaPredicted RBP12.1□□□□□ -0.47
CUX2-201ENST00000261726 GGACTQ9BVM4 153 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 ATP5LO75964 103 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 LEPP41159 167 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 ASPHD2Q6ICH7 369 aa12.1□□□□□ -0.47
CUX2-201ENST00000261726 PRSS53Q2L4Q9 553 aa12.09□□□□□ -0.47
CUX2-201ENST00000261726 PTPRZ1P23471 2315 aaPredicted RBP12.09□□□□□ -0.47
CUX2-201ENST00000261726 HOXB1P14653 301 aaPredicted RBP12.09□□□□□ -0.47
CUX2-201ENST00000261726 OR10J3Q5JRS4 329 aa12.09□□□□□ -0.47
CUX2-201ENST00000261726 C1orf100Q5SVJ3 147 aa12.09□□□□□ -0.47
CUX2-201ENST00000261726 IFI27L2Q9H2X8 130 aa12.09□□□□□ -0.47
CUX2-201ENST00000261726 A0A1B0GV72 72 aa12.09□□□□□ -0.47
CUX2-201ENST00000261726 ELOVL5Q9NYP7 299 aa12.09□□□□□ -0.47
CUX2-201ENST00000261726 TRAV8-2A0A0B4J237 113 aa12.09□□□□□ -0.47
CUX2-201ENST00000261726 A0A0G2JLM5 398 aa12.09□□□□□ -0.47
CUX2-201ENST00000261726 SP9P0CG40 484 aa12.09□□□□□ -0.47
CUX2-201ENST00000261726 C1orf162Q8NEQ5 155 aaPredicted RBP12.09□□□□□ -0.47
CUX2-201ENST00000261726 GATAD1Q8WUU5 269 aa12.09□□□□□ -0.47
CUX2-201ENST00000261726 FAM168AQ92567 244 aa12.09□□□□□ -0.47
CUX2-201ENST00000261726 TRBV5-7A0A0A0MS05 114 aa12.09□□□□□ -0.47
CUX2-201ENST00000261726 PAX2Q02962 417 aa12.09□□□□□ -0.47
CUX2-201ENST00000261726 FAM19A2Q8N3H0 131 aa12.09□□□□□ -0.47
CUX2-201ENST00000261726 OR11H4Q8NGC9 324 aa12.09□□□□□ -0.47
CUX2-201ENST00000261726 PILRBQ9UKJ0 227 aa12.09□□□□□ -0.47
CUX2-201ENST00000261726 GCM2O75603 506 aaPredicted RBP12.08□□□□□ -0.47
CUX2-201ENST00000261726 CA7P43166 264 aa12.08□□□□□ -0.47
CUX2-201ENST00000261726 KIR3DL3Q8N743 410 aa12.08□□□□□ -0.47
CUX2-201ENST00000261726 FDCSPQ8NFU4 85 aa12.08□□□□□ -0.47
CUX2-201ENST00000261726 ASXL3Q9C0F0 2248 aa12.08□□□□□ -0.48
CUX2-201ENST00000261726 TMEM50AO95807 157 aa12.08□□□□□ -0.48
CUX2-201ENST00000261726 CD7P09564 240 aa12.08□□□□□ -0.48
CUX2-201ENST00000261726 C7orf69Q9H7B7 122 aa12.08□□□□□ -0.48
CUX2-201ENST00000261726 DMRTA1Q5VZB9 504 aa12.08□□□□□ -0.48
CUX2-201ENST00000261726 FER1L6-AS1Q8NA97 138 aa12.08□□□□□ -0.48
CUX2-201ENST00000261726 C21orf62Q9NYP8 219 aa12.08□□□□□ -0.48
CUX2-201ENST00000261726 SPCS1Q9Y6A9 102 aa12.08□□□□□ -0.48
CUX2-201ENST00000261726 SAP25Q8TEE9 199 aa12.08□□□□□ -0.48
CUX2-201ENST00000261726 FMC1Q96HJ9 113 aa12.08□□□□□ -0.48
CUX2-201ENST00000261726 IL36BQ9NZH7 164 aa12.08□□□□□ -0.48
CUX2-201ENST00000261726 ACP7Q6ZNF0 438 aa12.08□□□□□ -0.48
CUX2-201ENST00000261726 WFDC12Q8WWY7 111 aa12.08□□□□□ -0.48
CUX2-201ENST00000261726 VGLL1Q99990 258 aa12.08□□□□□ -0.48
CUX2-201ENST00000261726 LOXL4Q96JB6 756 aa12.08□□□□□ -0.48
CUX2-201ENST00000261726 RPP21Q9H633 154 aaKnown RBP12.08□□□□□ -0.48
CUX2-201ENST00000261726 A0A1B0GUT8 65 aa12.07□□□□□ -0.48
CUX2-201ENST00000261726 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.07□□□□□ -0.48
CUX2-201ENST00000261726 DPM3Q9P2X0 92 aa12.07□□□□□ -0.48
CUX2-201ENST00000261726 GPX4P36969 197 aaPredicted RBP12.07□□□□□ -0.48
CUX2-201ENST00000261726 BSPH1Q075Z2 132 aa12.07□□□□□ -0.48
CUX2-201ENST00000261726 FAM89BQ8N5H3 189 aa12.07□□□□□ -0.48
CUX2-201ENST00000261726 FAM216BQ8N7L0 139 aa12.07□□□□□ -0.48
CUX2-201ENST00000261726 POC1AQ8NBT0 407 aa12.07□□□□□ -0.48
CUX2-201ENST00000261726 TMEM54Q969K7 222 aa12.07□□□□□ -0.48
CUX2-201ENST00000261726 GATA2P23769 480 aaPredicted RBP12.07□□□□□ -0.48
CUX2-201ENST00000261726 LDLRAD2Q5SZI1 272 aa12.07□□□□□ -0.48
CUX2-201ENST00000261726 OR52E5Q8NH55 327 aa12.07□□□□□ -0.48
CUX2-201ENST00000261726 PEMTQ9UBM1 199 aa12.07□□□□□ -0.48
CUX2-201ENST00000261726 RP1L1Q8IWN7 2480 aaPredicted RBP12.07□□□□□ -0.48
CUX2-201ENST00000261726 CRPP02741 224 aa12.07□□□□□ -0.48
CUX2-201ENST00000261726 ZNF415Q09FC8 603 aa12.07□□□□□ -0.48
CUX2-201ENST00000261726 C3orf36Q3SXR2 165 aa12.07□□□□□ -0.48
CUX2-201ENST00000261726 Q9H3A6 140 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms