RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 Q1RN00 199 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 C8orf31Q8N9H6 132 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 OR2W5A6NFC9 320 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 UBE2L6O14933 153 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 NMUP48645 174 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 HIST3H3Q16695 136 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 ALKBH6Q3KRA9 238 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 C19orf54Q5BKX5 351 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 UNQ5815/PRO19632Q6UWF5 114 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 SDF2L1Q9HCN8 221 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 FSCN3Q9NQT6 498 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 SPANXA1Q9NS26 97 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 UMODP07911 640 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 PDE6HQ13956 83 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 FXYD3Q14802 87 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 KIR3DL3Q8N743 410 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 NEUROG1Q92886 237 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 WFIKKN1Q96NZ8 548 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 PRSS22Q9GZN4 317 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 SMPXQ9UHP9 88 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 C15orf61A6NNL5 157 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 CIDEAO60543 219 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 PRSS1P07477 247 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 VAMP3Q15836 100 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 C2orf68Q2NKX9 166 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 IGSF11Q5DX21 431 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 ZNF738Q8NE65 137 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 OR1P1Q8NH06 330 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 SGMS2Q8NHU3 365 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 CADP27708 2225 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 TRGV11A0A075B6L2 103 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 CBY3A6NI87 242 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 AGAP20933 346 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 COL5A1-AS1Q5SY13 56 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 ZNF660Q6AZW8 331 aaPredicted RBP3.65□□□□□ -1.83
VPS13C-202ENST00000261517 C10orf111Q8N326 155 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 FDCSPQ8NFU4 85 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 PRELID3AQ96N28 172 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 MIEN1Q9BRT3 115 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 UQCR10Q9UDW1 63 aa3.65□□□□□ -1.83
VPS13C-202ENST00000261517 NBR2O15453 112 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 PAGE4O60829 102 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 ASCL4Q6XD76 172 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 OVOL1O14753 267 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 NKX2-8O15522 239 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 MYF5P13349 255 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 CRYGSP22914 178 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 EFNB1P98172 346 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 SRSF4Q08170 494 aaKnown RBP3.64□□□□□ -1.83
VPS13C-202ENST00000261517 ECSCRQ19T08 205 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 TMEM42Q69YG0 159 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 BEND2Q8NDZ0 799 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 OR4C5Q8NGB2 326 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 Q8TCH9 128 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 TRGV9Q99603 122 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 TMEM133Q9H2Q1 129 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 SNAI3Q3KNW1 292 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 CDCP2Q5VXM1 449 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 PUSL1Q8N0Z8 303 aaKnown RBP3.64□□□□□ -1.83
VPS13C-202ENST00000261517 C21orf62Q9NYP8 219 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 FZR1Q9UM11 496 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 DOCK10Q96BY6 2186 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 MDS2Q8NDY4 140 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 C18orf12Q96KH6 178 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 SRSF5Q13243 272 aaKnown RBP3.64□□□□□ -1.83
VPS13C-202ENST00000261517 BMPERQ8N8U9 685 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 HIVEP2P31629 2446 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 OR4C46A6NHA9 309 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 PATE3B3GLJ2 98 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 SRRM5B3KS81 715 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 THBDP07204 575 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 NMBP08949 121 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 VSIG10L2P0DP72 767 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 GCHFRP30047 84 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 OTX1P32242 354 aaPredicted RBP3.64□□□□□ -1.83
VPS13C-202ENST00000261517 SEC11AP67812 179 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 VWCEQ96DN2 955 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 CXCL2P19875 107 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 HEPN1Q6WQI6 88 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 C16orf47Q6ZP98 133 aaPredicted RBP3.64□□□□□ -1.83
VPS13C-202ENST00000261517 C1QTNF4Q9BXJ3 329 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 NPCDR1Q9BY65 106 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 CHD8Q9HCK8 2581 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 BRCA2P51587 3418 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 HLA-DRB1P01911 266 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 ATP6V0BQ99437 205 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 OSTCQ9NRP0 149 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 RPRMQ9NS64 109 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 IGHV3-43A0A0B4J1X8 118 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 IGHV3-43DP0DP04 118 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 ANOS1P23352 680 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 MFAP2P55001 183 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 NECAP1Q8NC96 275 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 PIEZO2Q9H5I5 2752 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 SCTP09683 121 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 CKS2P33552 79 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 EFNA4P52798 201 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 SCGB1D4Q6XE38 83 aa3.64□□□□□ -1.83
VPS13C-202ENST00000261517 OVOL2Q9BRP0 275 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms