RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 TNFRSF18Q9Y5U5 241 aa10.2□□□□□ -0.78
COL8A1-201ENST00000261037 MSGN1A6NI15 193 aa10.19□□□□□ -0.78
COL8A1-201ENST00000261037 AICDAQ9GZX7 198 aa10.19□□□□□ -0.78
COL8A1-201ENST00000261037 C7orf69Q9H7B7 122 aa10.19□□□□□ -0.78
COL8A1-201ENST00000261037 TGFAP01135 160 aa10.19□□□□□ -0.78
COL8A1-201ENST00000261037 TNFSF10P50591 281 aa10.19□□□□□ -0.78
COL8A1-201ENST00000261037 TMEM101Q96IK0 257 aa10.19□□□□□ -0.78
COL8A1-201ENST00000261037 TMEM70Q9BUB7 260 aa10.19□□□□□ -0.78
COL8A1-201ENST00000261037 PARD6GQ9BYG4 376 aaPredicted RBP10.19□□□□□ -0.78
COL8A1-201ENST00000261037 TRPM7Q96QT4 1865 aa10.19□□□□□ -0.78
COL8A1-201ENST00000261037 CCL3L1P16619 93 aa10.19□□□□□ -0.78
COL8A1-201ENST00000261037 PSG7Q13046 419 aa10.19□□□□□ -0.78
COL8A1-201ENST00000261037 NHLRC3Q5JS37 347 aa10.19□□□□□ -0.78
COL8A1-201ENST00000261037 ST6GALNAC3Q8NDV1 305 aa10.19□□□□□ -0.78
COL8A1-201ENST00000261037 HIST1H2BAQ96A08 127 aa10.19□□□□□ -0.78
COL8A1-201ENST00000261037 RTBDNQ9BSG5 229 aaPredicted RBP10.19□□□□□ -0.78
COL8A1-201ENST00000261037 DPM3Q9P2X0 92 aa10.19□□□□□ -0.78
COL8A1-201ENST00000261037 NINQ8N4C6 2090 aa10.19□□□□□ -0.78
COL8A1-201ENST00000261037 EFEMP2O95967 443 aa10.19□□□□□ -0.78
COL8A1-201ENST00000261037 ZNF506Q5JVG8 444 aa10.19□□□□□ -0.78
COL8A1-201ENST00000261037 WDYHV1Q96HA8 205 aa10.19□□□□□ -0.78
COL8A1-201ENST00000261037 PRELID3AQ96N28 172 aa10.19□□□□□ -0.78
COL8A1-201ENST00000261037 C19orf24Q9BVV8 132 aa10.19□□□□□ -0.78
COL8A1-201ENST00000261037 IGKV3D-20A0A0C4DH25 116 aa10.18□□□□□ -0.78
COL8A1-201ENST00000261037 UMODP07911 640 aa10.18□□□□□ -0.78
COL8A1-201ENST00000261037 C12orf54Q6X4T0 127 aa10.18□□□□□ -0.78
COL8A1-201ENST00000261037 PLPPR1Q8TBJ4 325 aa10.18□□□□□ -0.78
COL8A1-201ENST00000261037 RCC1LQ96I51 464 aaKnown RBP10.18□□□□□ -0.78
COL8A1-201ENST00000261037 LINC01587Q99440 93 aa10.18□□□□□ -0.78
COL8A1-201ENST00000261037 KBTBD11-OT1A0A1B0GTJ5 212 aa10.18□□□□□ -0.78
COL8A1-201ENST00000261037 LYNX1G3V0Z9 82 aa10.18□□□□□ -0.78
COL8A1-201ENST00000261037 LYNX1P0DP58 116 aa10.18□□□□□ -0.78
COL8A1-201ENST00000261037 ZCCHC24Q8N2G6 241 aaKnown RBP10.18□□□□□ -0.78
COL8A1-201ENST00000261037 NBEAP1P0C6P0 100 aa10.18□□□□□ -0.78
COL8A1-201ENST00000261037 GNG5P63218 68 aa10.18□□□□□ -0.78
COL8A1-201ENST00000261037 JOSD1Q15040 202 aaPredicted RBP10.18□□□□□ -0.78
COL8A1-201ENST00000261037 TMEM30BQ3MIR4 351 aa10.18□□□□□ -0.78
COL8A1-201ENST00000261037 FAM71F2Q6NXP2 309 aa10.18□□□□□ -0.78
COL8A1-201ENST00000261037 PTPRZ1P23471 2315 aaPredicted RBP10.18□□□□□ -0.78
COL8A1-201ENST00000261037 APOHP02749 345 aaPredicted RBP10.18□□□□□ -0.78
COL8A1-201ENST00000261037 RAB9AP51151 201 aa10.18□□□□□ -0.78
COL8A1-201ENST00000261037 COLCA1Q6ZS62 124 aa10.18□□□□□ -0.78
COL8A1-201ENST00000261037 KCNS1Q96KK3 526 aa10.18□□□□□ -0.78
COL8A1-201ENST00000261037 PLSCR2Q9NRY7 297 aa10.18□□□□□ -0.78
COL8A1-201ENST00000261037 PEX7O00628 323 aa10.18□□□□□ -0.78
COL8A1-201ENST00000261037 ZNF418Q8TF45 676 aaPredicted RBP10.18□□□□□ -0.78
COL8A1-201ENST00000261037 TM2D1Q9BX74 207 aa10.18□□□□□ -0.78
COL8A1-201ENST00000261037 RPRMQ9NS64 109 aa10.18□□□□□ -0.78
COL8A1-201ENST00000261037 PTPRFP10586 1907 aa10.17□□□□□ -0.78
COL8A1-201ENST00000261037 A0A087WV48 116 aa10.17□□□□□ -0.78
COL8A1-201ENST00000261037 A0A0G2JK05 382 aa10.17□□□□□ -0.78
COL8A1-201ENST00000261037 FAM209BQ5JX69 171 aa10.17□□□□□ -0.78
COL8A1-201ENST00000261037 LEMD1Q68G75 181 aa10.17□□□□□ -0.78
COL8A1-201ENST00000261037 TMEM105Q8N8V8 129 aa10.17□□□□□ -0.78
COL8A1-201ENST00000261037 TDRD6O60522 2096 aaKnown RBP10.17□□□□□ -0.78
COL8A1-201ENST00000261037 LHFPL4Q7Z7J7 247 aa10.17□□□□□ -0.78
COL8A1-201ENST00000261037 WFDC12Q8WWY7 111 aa10.17□□□□□ -0.78
COL8A1-201ENST00000261037 C1QTNF5Q9BXJ0 243 aa10.17□□□□□ -0.78
COL8A1-201ENST00000261037 C21orf62Q9NYP8 219 aa10.17□□□□□ -0.78
COL8A1-201ENST00000261037 SEMA5BQ9P283 1151 aa10.17□□□□□ -0.78
COL8A1-201ENST00000261037 PSME4Q14997 1843 aa10.17□□□□□ -0.78
COL8A1-201ENST00000261037 PIKFYVEQ9Y2I7 2098 aa10.17□□□□□ -0.78
COL8A1-201ENST00000261037 NPIPB9F8W1W9 429 aa10.17□□□□□ -0.78
COL8A1-201ENST00000261037 NPIPB7O75200 414 aa10.17□□□□□ -0.78
COL8A1-201ENST00000261037 DDTP30046 118 aa10.17□□□□□ -0.78
COL8A1-201ENST00000261037 SAPCD1Q5SSQ6 148 aa10.17□□□□□ -0.78
COL8A1-201ENST00000261037 TBL2Q9Y4P3 447 aaKnown RBP10.17□□□□□ -0.78
COL8A1-201ENST00000261037 SAA2-SAA4A0A096LPE2 208 aa10.17□□□□□ -0.78
COL8A1-201ENST00000261037 NDUFA3O95167 84 aa10.17□□□□□ -0.78
COL8A1-201ENST00000261037 SAA2P0DJI9 122 aaPredicted RBP10.17□□□□□ -0.78
COL8A1-201ENST00000261037 ZNF414Q96IQ9 312 aa10.17□□□□□ -0.78
COL8A1-201ENST00000261037 FOXC2Q99958 501 aa10.17□□□□□ -0.78
COL8A1-201ENST00000261037 TOMM7Q9P0U1 55 aa10.17□□□□□ -0.78
COL8A1-201ENST00000261037 TRBV9A0A0B4J1U6 114 aa10.16□□□□□ -0.78
COL8A1-201ENST00000261037 OR52E5Q8NH55 327 aa10.16□□□□□ -0.78
COL8A1-201ENST00000261037 GATAD1Q8WUU5 269 aa10.16□□□□□ -0.78
COL8A1-201ENST00000261037 NEU4Q8WWR8 484 aaPredicted RBP10.16□□□□□ -0.78
COL8A1-201ENST00000261037 VWCEQ96DN2 955 aa10.16□□□□□ -0.78
COL8A1-201ENST00000261037 K7ERU9 68 aa10.16□□□□□ -0.78
COL8A1-201ENST00000261037 TM4SF5O14894 197 aa10.16□□□□□ -0.78
COL8A1-201ENST00000261037 CSRP3P50461 194 aa10.16□□□□□ -0.78
COL8A1-201ENST00000261037 OSR1Q8TAX0 266 aaPredicted RBP10.16□□□□□ -0.78
COL8A1-201ENST00000261037 Q9H3A6 140 aa10.16□□□□□ -0.78
COL8A1-201ENST00000261037 OTOFQ9HC10 1997 aa10.16□□□□□ -0.78
COL8A1-201ENST00000261037 TSPAN13O95857 204 aa10.16□□□□□ -0.78
COL8A1-201ENST00000261037 CACNG7P62955 275 aa10.16□□□□□ -0.78
COL8A1-201ENST00000261037 ALKBH7Q9BT30 221 aaPredicted RBP10.16□□□□□ -0.78
COL8A1-201ENST00000261037 PSMG3Q9BT73 122 aaPredicted RBP10.16□□□□□ -0.78
COL8A1-201ENST00000261037 SCN2AQ99250 2005 aa10.16□□□□□ -0.78
COL8A1-201ENST00000261037 SAA1P0DJI8 122 aaPredicted RBP10.16□□□□□ -0.78
COL8A1-201ENST00000261037 SDHCQ99643 169 aaPredicted RBP10.16□□□□□ -0.78
COL8A1-201ENST00000261037 FOXD3Q9UJU5 478 aaPredicted RBP10.16□□□□□ -0.78
COL8A1-201ENST00000261037 RALGAPA2Q2PPJ7 1873 aa10.16□□□□□ -0.78
COL8A1-201ENST00000261037 NPIPB4C9JG80 1138 aa10.16□□□□□ -0.78
COL8A1-201ENST00000261037 NUTF2P61970 127 aaKnown RBP10.16□□□□□ -0.78
COL8A1-201ENST00000261037 TBR1Q16650 682 aa10.16□□□□□ -0.78
COL8A1-201ENST00000261037 OR4X2Q8NGF9 303 aa10.16□□□□□ -0.78
COL8A1-201ENST00000261037 SCGB3A1Q96QR1 104 aa10.16□□□□□ -0.78
COL8A1-201ENST00000261037 CDX1P47902 265 aaPredicted RBP10.15□□□□□ -0.78
COL8A1-201ENST00000261037 REC114Q7Z4M0 266 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms