RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 OR1S2Q8NGQ3 325 aa14.01□□□□□ -0.17
SRSF1-201ENST00000258962 TMED6Q8WW62 240 aa14.01□□□□□ -0.17
SRSF1-201ENST00000258962 TNCP24821 2201 aa14.01□□□□□ -0.17
SRSF1-201ENST00000258962 RAB5CP51148 216 aa14□□□□□ -0.17
SRSF1-201ENST00000258962 HBG1P69891 147 aa14□□□□□ -0.17
SRSF1-201ENST00000258962 HBG2P69892 147 aa14□□□□□ -0.17
SRSF1-201ENST00000258962 STPG2Q8N412 459 aa14□□□□□ -0.17
SRSF1-201ENST00000258962 EIF4E3Q8N5X7 224 aaKnown RBP14□□□□□ -0.17
SRSF1-201ENST00000258962 CLCC1Q96S66 551 aa14□□□□□ -0.17
SRSF1-201ENST00000258962 GINS3Q9BRX5 216 aa14□□□□□ -0.17
SRSF1-201ENST00000258962 NUP50Q9UKX7 468 aa14□□□□□ -0.17
SRSF1-201ENST00000258962 PRNDQ9UKY0 176 aa14□□□□□ -0.17
SRSF1-201ENST00000258962 HSPE1P61604 102 aaKnown RBP14□□□□□ -0.17
SRSF1-201ENST00000258962 TMEM167AQ8TBQ9 72 aa14□□□□□ -0.17
SRSF1-201ENST00000258962 CFHR4Q92496 578 aa14□□□□□ -0.17
SRSF1-201ENST00000258962 GNPNAT1Q96EK6 184 aaPredicted RBP14□□□□□ -0.17
SRSF1-201ENST00000258962 OR51B2Q9Y5P1 312 aa14□□□□□ -0.17
SRSF1-201ENST00000258962 C15orf62A8K5M9 175 aa13.99□□□□□ -0.17
SRSF1-201ENST00000258962 PMS2P5A8MQ11 134 aa13.99□□□□□ -0.17
SRSF1-201ENST00000258962 TIMM23O14925 209 aa13.99□□□□□ -0.17
SRSF1-201ENST00000258962 IFNA5P01569 189 aa13.99□□□□□ -0.17
SRSF1-201ENST00000258962 CEACAM3P40198 252 aa13.99□□□□□ -0.17
SRSF1-201ENST00000258962 SULT1A2P50226 295 aa13.99□□□□□ -0.17
SRSF1-201ENST00000258962 RPP30P78346 268 aaKnown RBP13.99□□□□□ -0.17
SRSF1-201ENST00000258962 AANATQ16613 207 aa13.99□□□□□ -0.17
SRSF1-201ENST00000258962 MRGPRG-AS1Q2M3A8 158 aa13.99□□□□□ -0.17
SRSF1-201ENST00000258962 ATP5SQ99766 215 aa13.99□□□□□ -0.17
SRSF1-201ENST00000258962 PLA2G2EQ9NZK7 142 aa13.99□□□□□ -0.17
SRSF1-201ENST00000258962 ZNF257Q9Y2Q1 563 aa13.99□□□□□ -0.17
SRSF1-201ENST00000258962 STRAPQ9Y3F4 350 aaKnown RBP13.99□□□□□ -0.17
SRSF1-201ENST00000258962 HILPDAQ9Y5L2 63 aa13.99□□□□□ -0.17
SRSF1-201ENST00000258962 MFSD2BA6NFX1 497 aa13.98□□□□□ -0.17
SRSF1-201ENST00000258962 PAX6P26367 422 aa13.98□□□□□ -0.17
SRSF1-201ENST00000258962 CNTFRP26992 372 aa13.98□□□□□ -0.17
SRSF1-201ENST00000258962 LGALS7P47929 136 aa13.98□□□□□ -0.17
SRSF1-201ENST00000258962 HABP2Q14520 560 aaPredicted RBP13.98□□□□□ -0.17
SRSF1-201ENST00000258962 THNSL2Q86YJ6 484 aa13.98□□□□□ -0.17
SRSF1-201ENST00000258962 DYNAPQ8N1N2 210 aa13.98□□□□□ -0.17
SRSF1-201ENST00000258962 OR4A5Q8NH83 315 aa13.98□□□□□ -0.17
SRSF1-201ENST00000258962 VSTM2AQ8TAG5 236 aa13.98□□□□□ -0.17
SRSF1-201ENST00000258962 C17orf50Q8WW18 174 aa13.98□□□□□ -0.17
SRSF1-201ENST00000258962 CXorf58Q96LI9 332 aa13.98□□□□□ -0.17
SRSF1-201ENST00000258962 TSNAXQ99598 290 aaKnown RBP13.98□□□□□ -0.17
SRSF1-201ENST00000258962 TPSG1Q9NRR2 321 aa13.98□□□□□ -0.17
SRSF1-201ENST00000258962 TEX50A0A1B0GTY4 177 aa13.97□□□□□ -0.17
SRSF1-201ENST00000258962 ZNF705EA8MWA4 302 aaPredicted RBP13.97□□□□□ -0.17
SRSF1-201ENST00000258962 SLC25A17O43808 307 aa13.97□□□□□ -0.17
SRSF1-201ENST00000258962 FBXO24O75426 580 aa13.97□□□□□ -0.17
SRSF1-201ENST00000258962 CRYGBP07316 175 aa13.97□□□□□ -0.17
SRSF1-201ENST00000258962 FGF2P09038 288 aa13.97□□□□□ -0.17
SRSF1-201ENST00000258962 HOXA1P49639 335 aaPredicted RBP13.97□□□□□ -0.17
SRSF1-201ENST00000258962 UBE2E1P51965 193 aa13.97□□□□□ -0.17
SRSF1-201ENST00000258962 VMA21Q3ZAQ7 101 aa13.97□□□□□ -0.17
SRSF1-201ENST00000258962 MINOS1Q5TGZ0 78 aa13.97□□□□□ -0.17
SRSF1-201ENST00000258962 ZNF418Q8TF45 676 aaPredicted RBP13.97□□□□□ -0.17
SRSF1-201ENST00000258962 MINOS1-NBL1R4GNA1 71 aa13.97□□□□□ -0.17
SRSF1-201ENST00000258962 RAB19A4D1S5 217 aa13.96□□□□□ -0.17
SRSF1-201ENST00000258962 KRBOX1C9JBD0 128 aa13.96□□□□□ -0.17
SRSF1-201ENST00000258962 TEX46H3BTG2 121 aa13.96□□□□□ -0.17
SRSF1-201ENST00000258962 I3L521 148 aa13.96□□□□□ -0.17
SRSF1-201ENST00000258962 TCF21O43680 179 aa13.96□□□□□ -0.17
SRSF1-201ENST00000258962 VENTXO95231 258 aa13.96□□□□□ -0.17
SRSF1-201ENST00000258962 FSHBP01225 129 aa13.96□□□□□ -0.17
SRSF1-201ENST00000258962 SPP1P10451 314 aa13.96□□□□□ -0.17
SRSF1-201ENST00000258962 RPL8P62917 257 aaKnown RBP13.96□□□□□ -0.17
SRSF1-201ENST00000258962 PRCDQ00LT1 54 aa13.96□□□□□ -0.17
SRSF1-201ENST00000258962 PSG5Q15238 335 aa13.96□□□□□ -0.17
SRSF1-201ENST00000258962 ATP6V1FQ16864 119 aa13.96□□□□□ -0.17
SRSF1-201ENST00000258962 UQCC3Q6UW78 93 aa13.96□□□□□ -0.17
SRSF1-201ENST00000258962 TMEM170AQ8WVE7 144 aa13.96□□□□□ -0.17
SRSF1-201ENST00000258962 MARC2Q969Z3 335 aa13.96□□□□□ -0.17
SRSF1-201ENST00000258962 AJUBAQ96IF1 538 aa13.96□□□□□ -0.17
SRSF1-201ENST00000258962 SH3BGRL3Q9H299 93 aa13.96□□□□□ -0.17
SRSF1-201ENST00000258962 ZNF430Q9H8G1 570 aaPredicted RBP13.96□□□□□ -0.17
SRSF1-201ENST00000258962 HEYLQ9NQ87 328 aaPredicted RBP13.96□□□□□ -0.17
SRSF1-201ENST00000258962 UMAD1C9J7I0 102 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 TRIM77I1YAP6 450 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 OPN1MWP04001 364 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 OPN1MW2P0DN77 364 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 OPN1MW3P0DN78 364 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 CD1BP29016 333 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 SLC38A11Q08AI6 406 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 SSX2Q16385 188 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 OR8G2PQ6IF36 304 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 SLC25A24Q6NUK1 477 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 TEX45Q8NA69 505 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 HSD17B11Q8NBQ5 300 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 OR5B3Q8NH48 314 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 SCGB1C1Q8TD33 95 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 HIPK2Q9H2X6 1198 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 PARP11Q9NR21 331 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 FKBP11Q9NYL4 201 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 TBL2Q9Y4P3 447 aaKnown RBP13.95□□□□□ -0.18
SRSF1-201ENST00000258962 CGB1A6NKQ9 187 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 OOSP1A8MZH6 123 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 RRHO14718 337 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 PJVKQ0ZLH3 352 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 FBLN7Q53RD9 439 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 KLF17Q5JT82 389 aaPredicted RBP13.95□□□□□ -0.18
SRSF1-201ENST00000258962 IL34Q6ZMJ4 242 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms