RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 OR1P1Q8NH06 330 aa12.05□□□□□ -0.48
TRAFD1-201ENST00000257604 HSD17B10Q99714 261 aaKnown RBP12.05□□□□□ -0.48
TRAFD1-201ENST00000257604 CRYBG3Q68DQ2 2970 aa12.05□□□□□ -0.48
TRAFD1-201ENST00000257604 PPIAL4EA0A075B759 164 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 A0A1B0GWJ7 208 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 PPIAL4DF5H284 164 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 IGKV1-16P04430 117 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 PPIAL4FP0DN26 164 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 SPCS3P61009 180 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 DIAPH2-AS1Q14236 149 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 ZNF525Q8N782 197 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 PPIAL4AQ9Y536 164 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 A8MWP6 167 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 VSTM5A8MXK1 200 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 GALR1P47211 349 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 LOXL3P58215 753 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 CD81P60033 236 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 JOSD1Q15040 202 aaPredicted RBP12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 IFI27L2Q9H2X8 130 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 TMEM140Q9NV12 185 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 VAX2Q9UIW0 290 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 KBTBD11-OT1A0A1B0GTJ5 212 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 PPP5D1E7EU14 171 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 H7BYZ3 331 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 PNRC1Q12796 327 aaPredicted RBP12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 RPP25LQ8N5L8 163 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 ZNF709Q8N972 641 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 SSMEM1Q8WWF3 244 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 PATZ1Q9HBE1 687 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 TUBG2Q9NRH3 451 aa12.04□□□□□ -0.48
TRAFD1-201ENST00000257604 TRBV24-1A0A075B6N3 115 aa12.03□□□□□ -0.48
TRAFD1-201ENST00000257604 GRIFINA4D1Z8 144 aa12.03□□□□□ -0.48
TRAFD1-201ENST00000257604 NKX6-3A6NJ46 265 aa12.03□□□□□ -0.48
TRAFD1-201ENST00000257604 ZNF705FA8MVS1 300 aaPredicted RBP12.03□□□□□ -0.48
TRAFD1-201ENST00000257604 CD3EP07766 207 aa12.03□□□□□ -0.48
TRAFD1-201ENST00000257604 ZNF705DP0CH99 300 aaPredicted RBP12.03□□□□□ -0.48
TRAFD1-201ENST00000257604 ZNF705BP0CI00 300 aaPredicted RBP12.03□□□□□ -0.48
TRAFD1-201ENST00000257604 RPL29P47914 159 aaKnown RBP12.03□□□□□ -0.48
TRAFD1-201ENST00000257604 TCF23Q7RTU1 214 aa12.03□□□□□ -0.48
TRAFD1-201ENST00000257604 Q8TCH9 128 aa12.03□□□□□ -0.48
TRAFD1-201ENST00000257604 UTP20O75691 2785 aaKnown RBP12.03□□□□□ -0.48
TRAFD1-201ENST00000257604 LHBP01229 141 aa12.03□□□□□ -0.48
TRAFD1-201ENST00000257604 TMEM241Q24JQ0 296 aa12.03□□□□□ -0.48
TRAFD1-201ENST00000257604 BSXQ3C1V8 233 aa12.03□□□□□ -0.48
TRAFD1-201ENST00000257604 OR10X1Q8NGY0 326 aa12.03□□□□□ -0.48
TRAFD1-201ENST00000257604 RNASE6Q93091 150 aaKnown RBP12.03□□□□□ -0.48
TRAFD1-201ENST00000257604 STUMQ69YW2 141 aa12.02□□□□□ -0.48
TRAFD1-201ENST00000257604 NGBQ9NPG2 151 aa12.02□□□□□ -0.48
TRAFD1-201ENST00000257604 TMEM106BQ9NUM4 274 aa12.02□□□□□ -0.48
TRAFD1-201ENST00000257604 JPT1Q9UK76 154 aa12.02□□□□□ -0.48
TRAFD1-201ENST00000257604 HRNRQ86YZ3 2850 aaPredicted RBP12.02□□□□□ -0.48
TRAFD1-201ENST00000257604 CFAP46Q8IYW2 2715 aa12.02□□□□□ -0.49
TRAFD1-201ENST00000257604 LRRK2Q5S007 2527 aa12.02□□□□□ -0.49
TRAFD1-201ENST00000257604 RRHO14718 337 aa12.02□□□□□ -0.49
TRAFD1-201ENST00000257604 COX7A1P24310 79 aa12.02□□□□□ -0.49
TRAFD1-201ENST00000257604 RPL23P62829 140 aaKnown RBP12.02□□□□□ -0.49
TRAFD1-201ENST00000257604 TMEM256Q8N2U0 113 aa12.02□□□□□ -0.49
TRAFD1-201ENST00000257604 TRAV38-1A0A0B4J264 116 aa12.02□□□□□ -0.49
TRAFD1-201ENST00000257604 DVL1O14640 695 aa12.02□□□□□ -0.49
TRAFD1-201ENST00000257604 NDUFB3O43676 98 aa12.02□□□□□ -0.49
TRAFD1-201ENST00000257604 SPINK4O60575 86 aa12.02□□□□□ -0.49
TRAFD1-201ENST00000257604 PAGE4O60829 102 aa12.02□□□□□ -0.49
TRAFD1-201ENST00000257604 PFN1P07737 140 aaKnown RBP12.02□□□□□ -0.49
TRAFD1-201ENST00000257604 PRB4P10163 310 aaPredicted RBP12.02□□□□□ -0.49
TRAFD1-201ENST00000257604 FFAR4Q5NUL3 377 aa12.02□□□□□ -0.49
TRAFD1-201ENST00000257604 FAM169BQ8N8A8 192 aa12.02□□□□□ -0.49
TRAFD1-201ENST00000257604 TAF15Q92804 592 aaKnown RBP eCLIP12.02□□□□□ -0.49
TRAFD1-201ENST00000257604 OR5B12Q96R08 314 aa12.02□□□□□ -0.49
TRAFD1-201ENST00000257604 DERL1Q9BUN8 251 aa12.02□□□□□ -0.49
TRAFD1-201ENST00000257604 SRD5A3Q9H8P0 318 aa12.02□□□□□ -0.49
TRAFD1-201ENST00000257604 TRAV1-1A0A0B4J248 108 aa12.01□□□□□ -0.49
TRAFD1-201ENST00000257604 NUPR1O60356 82 aa12.01□□□□□ -0.49
TRAFD1-201ENST00000257604 HTD2P86397 168 aa12.01□□□□□ -0.49
TRAFD1-201ENST00000257604 MEF2BQ02080 365 aaPredicted RBP12.01□□□□□ -0.49
TRAFD1-201ENST00000257604 FAM78BQ5VT40 261 aa12.01□□□□□ -0.49
TRAFD1-201ENST00000257604 ZNF705AQ6ZN79 300 aaPredicted RBP12.01□□□□□ -0.49
TRAFD1-201ENST00000257604 PARLQ9H300 379 aa12.01□□□□□ -0.49
TRAFD1-201ENST00000257604 ELOVL5Q9NYP7 299 aa12.01□□□□□ -0.49
TRAFD1-201ENST00000257604 NAT8Q9UHE5 227 aa12.01□□□□□ -0.49
TRAFD1-201ENST00000257604 hADV38S2A0JD32 116 aa12.01□□□□□ -0.49
TRAFD1-201ENST00000257604 PRR31Q5SQ13 230 aa12.01□□□□□ -0.49
TRAFD1-201ENST00000257604 ZBTB34Q8NCN2 500 aa12.01□□□□□ -0.49
TRAFD1-201ENST00000257604 OR5R1Q8NH85 324 aa12.01□□□□□ -0.49
TRAFD1-201ENST00000257604 ENY2Q9NPA8 101 aa12.01□□□□□ -0.49
TRAFD1-201ENST00000257604 USP9YO00507 2555 aaPredicted RBP12□□□□□ -0.49
TRAFD1-201ENST00000257604 RAB29O14966 203 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 ACSM6Q6P461 480 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 TEX38Q6PEX7 206 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 DPPA3Q6W0C5 159 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 ZNF788Q6ZQV5 615 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 MOB3BQ86TA1 216 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 TMEM242Q9NWH2 141 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 HPRT1P00492 218 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 THBS3P49746 956 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 LRRC75BQ2VPJ9 315 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 TMEM41BQ5BJD5 291 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 C1orf174Q8IYL3 243 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 MUC15Q8N387 334 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 OR10G4Q8NGN3 311 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 MBD3L1Q8WWY6 194 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms